Psyllid ID: psy9427

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
Protein Sequence
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Secondary Structure (PSIPRED)
cEEEcccccccEEcccccccccccccEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccEEEccccccccccccccccccccccccccccccccEEcccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccccHHHHHHHccccccccccccccccEEEEEccccEEEcccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccEEccccccccccHHHHccccccccccccccccEEEEEccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccEEEEcccccEEEccccccccHHHccccccccccccccc
Coil and Loop (DISEMBL)
MLVSFVFYLTLTcwnscdgvscgvNAVCVvnnhearcfcppgsyvgdpniecrqvpcvhnhdcstshacdllshtcipacdsgacgtnavcipedhrpvchcpvgthpspspdvhcaresnlcrdsnpchptarcedtgatngkvvcscpelsvgdpyktgcvpqgqcprgdadcppssrcsggqcvsvcqgacgpnalcravgkrpvcacpdgfsavggeaRVGCFremsacagdqeclageekciggrcrvaclshsdcsegercisslcqspctshsqcptgqacqagtcelgcrqneecsgqmicagskctGWVEELCIA
Flexible Loop (DISEMBL)
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Low Complexity Region (SEG)
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Disordered region (IsUnstruct)
*LVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVG*****************************CEDTGATNGKVVCSCPELSVGDPYKTGCVPQG**************CSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCI*
Disordered Region (DISOPRED)
MLVSFV*YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Disordered Region (DISEMBL)
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQ*******************QCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSH*********ISSLCQ*************ACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Disordered Region (DISPRO)
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCI*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLVSFVFYLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICAGSKCTGWVEELCIA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	324	2.2.26 [Sep-21-2011]
Q20911	4047	Probable cubilin OS=Caeno	yes	N/A	0.802	0.064	0.246	5e-06

>sp|Q20911|CUBN_CAEEL Probable cubilin OS=Caenorhabditis elegans GN=ZC116.3 PE=1 SV=4

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 116/349 (33%), Gaps = 89/349 (25%)

Query: 11  LTCWNSCDGVSCGVNAVCVVN-NHEARCFCPP---GSYVGDPNIEC-----------RQV 55
           L   N+CD   C     C+ +   +  C CPP   G+       EC              
Sbjct: 166 LIAINACDPNKCSNGGTCIPSFGAKFTCLCPPHFTGTTCEADIDECSVYNGTTAGCQNNG 225

Query: 56  PCVHNH-----DCSTSHACDLLSHTCIPACDSG--ACGTNAVCIPEDHRPV--------- 99
            C++N       C + +   L  +  + AC      CG +  CI     P          
Sbjct: 226 TCINNRGGFECQCQSGYHGSLCQYH-MSACSKTFELCGPHGHCIESIVDPTGQSSSDTTT 284

Query: 100 --CHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCS-CPELSVGD 156
             C C  G   S   +     + N C +SNPCHP   C +     G  VCS CP+     
Sbjct: 285 YKCICDWGFKVSSDKNNPTCVDVNEC-ESNPCHPGVDCINL---PGSFVCSGCPK----- 335

Query: 157 PYKTG---CVPQGQCPRGDADCPPSSRC------------------SGGQCV---SVCQG 192
            YKT    C+   +C      C P S+C                   GG CV   S  + 
Sbjct: 336 GYKTDGNVCIDVNECEGEIRVCSPLSKCHNTLGSYYCDSCPTGYSGDGGNCVKDDSCVKN 395

Query: 193 ACGPNALCR-------AVGKRPVCACPDGFSAVG-GEARVGCFREMSACAGDQECLAGEE 244
            C   A C+       AVG    C CPDG+   G GE   GC +  S    +  C+    
Sbjct: 396 KCHKLATCKVTDDGYSAVGDY-TCYCPDGYVGDGIGEE--GCVKSASNVCQNHNCVNA-- 450

Query: 245 KCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTC 293
               G+C+    +   C     C +      C   S C T      GTC
Sbjct: 451 ----GKCKPTSDTEYKC----ECEAGFLGKFCEKTSPCQTNPCKNGGTC 491

Cotransporter which plays a role in lipoprotein, vitamin and iron metabolism, by facilitating their uptake.
Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
195117710	7357	GI17886 [Drosophila mojavensis] gi|19391	0.916	0.040	0.485	2e-69
194766193	2634	GF23960 [Drosophila ananassae] gi|190617	0.919	0.113	0.474	7e-69
195052558	7303	GH13743 [Drosophila grimshawi] gi|193900	0.913	0.040	0.483	2e-68
195386886	3915	GJ17387 [Drosophila virilis] gi|19414859	0.922	0.076	0.472	4e-68
195471295	5806	GE14706 [Drosophila yakuba] gi|194174041	0.919	0.051	0.474	1e-67
270013391	21117	hypothetical protein TcasGA2_TC011986 [T	0.925	0.014	0.472	2e-67
194856153	4310	GG24368 [Drosophila erecta] gi|190660555	0.919	0.069	0.474	3e-67
195342490	14551	GM18084 [Drosophila sechellia] gi|194132	0.919	0.020	0.470	4e-67
198475573	17011	GA26108 [Drosophila pseudoobscura pseudo	0.919	0.017	0.464	5e-67
386769086	15638	dumpy, isoform I [Drosophila melanogaste	0.919	0.019	0.467	6e-67

>gi|195117710|ref|XP_002003390.1| GI17886 [Drosophila mojavensis] gi|193913965|gb|EDW12832.1| GI17886 [Drosophila mojavensis]

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/313 (48%), Positives = 196/313 (62%), Gaps = 16/313 (5%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            +L+C  +CD V CG  AVC+ NNH+A+C CPPG Y GDP      C+ VPCV+NHDC ++
Sbjct: 1779 SLSCRPACDSVKCGPRAVCITNNHQAQCQCPPGPYAGDPYDPFNGCKSVPCVYNHDCPSN 1838

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G   +P P+V C ++S     +
Sbjct: 1839 QMCNRMTHTCYDVCDEESCGENAICLAEDHRAVCQCPPGYRGNPLPEVACVKQSGCAPGT 1898

Query: 127  NPCHPTARCEDT--GATNGKVVCSCPELSVGD--PYKTGCVPQGQCPRGDADCPPSSRCS 182
              CHPTA CE T  GAT     C CP L VG+  P   GC P GQCP GDADCP ++ C+
Sbjct: 1899 --CHPTAICEITPDGAT-----CKCPPLFVGEAEPNTRGCRPDGQCPNGDADCPANTICA 1951

Query: 183  GGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAG 242
            GG+C++ C  ACG NA C+ V ++PVC+CP  F  +G  A+ GC R  S C  D +C  G
Sbjct: 1952 GGRCLNPCDNACGSNADCKVVNRKPVCSCPLRFQPIGDSAKNGCARSASKCQTDVDC--G 2009

Query: 243  EEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEE 302
             E C  G+CRVAC +  DCSEGERC+ ++C   C  HSQC  G AC  G C +GCR N+E
Sbjct: 2010 GELCYNGQCRVACRNGQDCSEGERCVGNVCVVACLDHSQCSKGLACIEGHCAIGCRSNKE 2069

Query: 303  CSGQMICAGSKCT 315
            C  +  C  +KC 
Sbjct: 2070 CKQEQSCISNKCA 2082

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194766193|ref|XP_001965209.1| GF23960 [Drosophila ananassae] gi|190617819|gb|EDV33343.1| GF23960 [Drosophila ananassae]

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 146/308 (47%), Positives = 190/308 (61%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            +L C  +CD V CG  AVC+ NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct: 1531 SLGCRPACDAVKCGPRAVCITNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1590

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ +DHR VCHCP G    P P+V C ++      +
Sbjct: 1591 QMCNRMTHTCFDVCDEESCGENAICLADDHRAVCHCPPGFRGDPLPEVACTKQGGC--AA 1648

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CHP+A CE         VC CP L VGDP + GC P GQCP GDADCP ++ C+GG+C
Sbjct: 1649 GTCHPSAICE---VAPEGPVCKCPPLFVGDPKRGGCRPDGQCPNGDADCPVNTICAGGRC 1705

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACGPNA C+ V ++PVC+CP  F  +   A+ GC R  S C  D +C  G E C
Sbjct: 1706 QNPCDNACGPNAECKVVNRKPVCSCPLRFQPISDSAKGGCARSQSKCLTDVDC--GGELC 1763

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C+S++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 1764 YNGQCRIACRNSQDCSDGESCMSNVCVVACLDHSQCSSGLACVEGHCIIGCRSNKECKQD 1823

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 1824 QSCIENKC 1831

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195052558|ref|XP_001993322.1| GH13743 [Drosophila grimshawi] gi|193900381|gb|EDV99247.1| GH13743 [Drosophila grimshawi]

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/312 (48%), Positives = 195/312 (62%), Gaps = 16/312 (5%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            +L+C ++CD V CG  AVC+ NNH+A+C CPPG Y GDPN     C+ VPCV+NHDC T+
Sbjct: 1806 SLSCRSACDTVKCGPRAVCITNNHQAQCQCPPGPYAGDPNDPFNGCKSVPCVYNHDCPTN 1865

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G   +P P+V C ++S     S
Sbjct: 1866 QMCNRMTHTCYDVCDEESCGENAICLAEDHRAVCQCPPGYRGNPLPEVACVKQSGCAAGS 1925

Query: 127  NPCHPTARCEDT--GATNGKVVCSCPELSVGDPYKT--GCVPQGQCPRGDADCPPSSRCS 182
              CH TA CE T  GAT     C CP L VG+P     GC P GQCP GDADCP ++ C+
Sbjct: 1926 --CHTTAICEVTPEGAT-----CKCPPLFVGEPQTNSRGCRPDGQCPNGDADCPANTICA 1978

Query: 183  GGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAG 242
            GG+C++ C  ACG NA C+ V ++PVC+CP  F  +   A+ GC R  S C  D +C  G
Sbjct: 1979 GGRCLNPCDNACGSNADCKVVNRKPVCSCPLRFQPISESAKNGCERSASKCLTDVDC--G 2036

Query: 243  EEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEE 302
             + C  G+CRVAC +  DCS+GERC  ++C   C  HSQC  G AC  G C +GCR N+E
Sbjct: 2037 GQLCYNGQCRVACRNTQDCSDGERCEGNVCVVTCLDHSQCAKGLACLEGHCAIGCRSNKE 2096

Query: 303  CSGQMICAGSKC 314
            C  +  C G+ C
Sbjct: 2097 CKQEQSCIGNNC 2108

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195386886|ref|XP_002052135.1| GJ17387 [Drosophila virilis] gi|194148592|gb|EDW64290.1| GJ17387 [Drosophila virilis]

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 192/311 (61%), Gaps = 12/311 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            +L+C ++CD V CG  AVC+ NNH+A+C CPPG Y GDP      C+ VPCV+NHDC T+
Sbjct: 1782 SLSCRSACDSVKCGPRAVCITNNHQAQCQCPPGPYAGDPYDPFNGCQSVPCVYNHDCPTN 1841

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G   +P P+V C +++     S
Sbjct: 1842 QMCNRMTHTCYDVCDEESCGENAICLAEDHRAVCQCPPGYRGNPLPEVACVKQNGCAPGS 1901

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKT--GCVPQGQCPRGDADCPPSSRCSGG 184
              CHPTA CE    T     C CP L VG+P     GC P GQCP GDADCP ++ C+GG
Sbjct: 1902 --CHPTAICE---VTPDGASCKCPPLFVGEPEPNSRGCRPDGQCPNGDADCPVNTICAGG 1956

Query: 185  QCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEE 244
            +C++ C  ACG NA C+ V ++ VC+CP  F  +   A+ GC R  S C  D +C  G E
Sbjct: 1957 RCLNPCDNACGANADCKVVNRKAVCSCPLRFQPISDSAKNGCARSASKCLTDVDC--GGE 2014

Query: 245  KCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECS 304
             C  G+CRVAC +  DCS+GE C+ ++C   C  HSQC  G AC  G C +GCR N+EC 
Sbjct: 2015 LCYNGQCRVACRNTQDCSDGESCLGNVCVVACLDHSQCAKGLACMEGHCAIGCRSNKECK 2074

Query: 305  GQMICAGSKCT 315
             +  C G+KC 
Sbjct: 2075 QEQSCIGNKCM 2085

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195471295|ref|XP_002087940.1| GE14706 [Drosophila yakuba] gi|194174041|gb|EDW87652.1| GE14706 [Drosophila yakuba]

 Score =  262 bits (670), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/308 (47%), Positives = 186/308 (60%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            TL C  +CD V CG  AVCV NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct: 1783 TLGCRPACDTVKCGPRAVCVTNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1842

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++      +
Sbjct: 1843 QMCNRMTHTCFDVCDEESCGDNAICLAEDHRAVCQCPPGFKGDPLPEVACTKQGGCAAGT 1902

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CHP+A CE    T    VC CP L VGDP   GC P GQCP GDADCP ++ C+GG C
Sbjct: 1903 --CHPSAICE---VTPEGPVCKCPPLFVGDPKSGGCRPDGQCPNGDADCPANTICAGGMC 1957

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACG NA C+ V ++PVC+CP  F  +   A+ GC R +S C  D +C  G   C
Sbjct: 1958 QNPCANACGSNAECKVVNRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDC--GGALC 2015

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C+ ++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 2016 YNGQCRIACRNSQDCSDGESCLKNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2075

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 2076 QSCIENKC 2083

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013391|gb|EFA09839.1| hypothetical protein TcasGA2_TC011986 [Tribolium castaneum]

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 189/311 (60%), Gaps = 11/311 (3%)

Query: 8    YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCS 64
            +  L C ++CD VSCG NAVCV NNH A+C CPPGS+VGDP+     C+ VPCV+N DC 
Sbjct: 1777 FGVLVCKSACDYVSCGPNAVCVTNNHVAQCQCPPGSFVGDPSDPTAGCKSVPCVYNIDCP 1836

Query: 65   TSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCR 124
             +  C+ ++HTC   CD  +CGTNAVCI E+H+ VC CP G  P+P  +V C     +C 
Sbjct: 1837 PTQLCNRMTHTCYDVCDEESCGTNAVCIAENHKAVCQCPPGYSPNPLAEVECV-PVEVC- 1894

Query: 125  DSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGG 184
            + NPCH +A CE   ATN    C CP  ++GDP+  GC P+G CP GD DCP  + C  G
Sbjct: 1895 NPNPCHTSAICE---ATNFGHTCKCPPNTIGDPFTAGCRPEGDCPNGDRDCPSRAVCQAG 1951

Query: 185  QCVSVC-QGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGE 243
            +C++ C Q  CGPNA+C    ++PVC CP  F       + GC R  + CA D +C  G 
Sbjct: 1952 KCINPCDQYQCGPNAICTVENRKPVCNCPAKFIPGPHGIQDGCVRIATRCASDVDC--GN 2009

Query: 244  EKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEEC 303
            E C  G+CR  C ++ DCS GERC+  +C  PC SHSQC   QAC  G C +GCR N+ C
Sbjct: 2010 EVCFNGQCRAVCRNNDDCSFGERCLEKICMIPCASHSQCRQDQACINGMCIIGCRSNKNC 2069

Query: 304  SGQMICAGSKC 314
                 C  +KC
Sbjct: 2070 PSDQACVNNKC 2080

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194856153|ref|XP_001968688.1| GG24368 [Drosophila erecta] gi|190660555|gb|EDV57747.1| GG24368 [Drosophila erecta]

 Score =  261 bits (667), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/308 (47%), Positives = 186/308 (60%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            TL C  +CD V CG  AVCV NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct: 1783 TLGCRPACDTVKCGPRAVCVTNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1842

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++      +
Sbjct: 1843 QMCNRMTHTCFDVCDEESCGDNAICLAEDHRAVCQCPPGFKGDPLPEVACTKQGGC--AA 1900

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CHP+A CE    T    VC CP L VGDP   GC P GQCP GDADCP ++ C+GG C
Sbjct: 1901 GTCHPSAICE---VTPEGPVCKCPPLFVGDPKSGGCRPDGQCPSGDADCPANTICAGGIC 1957

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACG NA C+ V ++PVC+CP  F  +   A+ GC R +S C  D +C  G   C
Sbjct: 1958 QNPCDNACGSNAECKVVNRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDC--GGALC 2015

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C+ ++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 2016 YNGQCRIACRNTQDCSDGESCLKNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2075

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 2076 QSCIENKC 2083

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195342490|ref|XP_002037833.1| GM18084 [Drosophila sechellia] gi|194132683|gb|EDW54251.1| GM18084 [Drosophila sechellia]

 Score =  261 bits (666), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 145/308 (47%), Positives = 186/308 (60%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            TL C  +CD V CG  AVCV NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct: 1781 TLGCRPACDTVKCGPRAVCVTNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1840

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++      +
Sbjct: 1841 QMCNRMTHTCFDVCDEESCGDNAICLAEDHRTVCQCPPGFKGDPLPEVACTKQGGCAAGT 1900

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CHP+A CE    T    VC CP L VGDP   GC P GQCP GDADCP ++ C+GG C
Sbjct: 1901 --CHPSAICE---VTPEGPVCKCPPLFVGDPKSGGCRPDGQCPNGDADCPANTICAGGVC 1955

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACG NA C+ + ++PVC+CP  F  +   A+ GC R +S C  D +C  G   C
Sbjct: 1956 QNPCDNACGSNAECKVINRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDC--GGALC 2013

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C+ ++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 2014 YNGQCRIACRNSQDCSDGESCLKNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2073

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 2074 QSCIENKC 2081

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198475573|ref|XP_002132955.1| GA26108 [Drosophila pseudoobscura pseudoobscura] gi|198138883|gb|EDY70357.1| GA26108 [Drosophila pseudoobscura pseudoobscura]

 Score =  260 bits (665), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/308 (46%), Positives = 189/308 (61%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            TL+C  +C+ V CG  AVC+ NNH+A+C CPPG + GDP      C+ VPCV+NHDC T+
Sbjct: 1782 TLSCRPACESVKCGPRAVCITNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPTT 1841

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++S     +
Sbjct: 1842 QMCNRMTHTCFDVCDEESCGENAICLAEDHRAVCQCPPGFRGDPLPEVACTKQSGCAAGT 1901

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CH +A CE    T    VC CP   VG+P   GC P GQCP GDADCP ++ C+GG+C
Sbjct: 1902 --CHASAICE---VTPEGPVCKCPPHFVGEPKSAGCRPDGQCPNGDADCPANTICAGGRC 1956

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACG NA C+ V ++PVC+CP  F  +   A+ GC R  S C  D +C  G E C
Sbjct: 1957 QNPCDNACGSNAECKVVNRKPVCSCPLRFQPISDSAKDGCARSASKCLTDVDC--GGELC 2014

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C++++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 2015 FNGQCRIACRNSQDCSDGESCLNNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2074

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 2075 QSCIENKC 2082

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|386769086|ref|NP_001245875.1| dumpy, isoform I [Drosophila melanogaster] gi|383291323|gb|AFH03551.1| dumpy, isoform I [Drosophila melanogaster]

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 144/308 (46%), Positives = 185/308 (60%), Gaps = 10/308 (3%)

Query: 10   TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
            TL C  +CD V CG  AVCV NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct: 1783 TLGCRPACDTVKCGPRAVCVTNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1842

Query: 67   HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
              C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++      +
Sbjct: 1843 QMCNRMTHTCFDVCDEESCGDNAICLAEDHRAVCQCPPGFKGDPLPEVACTKQGGCAAGT 1902

Query: 127  NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
              CHP+A CE    T    VC CP L VGD    GC P GQCP GDADCP ++ C+GG C
Sbjct: 1903 --CHPSAICE---VTPEGPVCKCPPLFVGDAKSGGCRPDGQCPNGDADCPANTICAGGVC 1957

Query: 187  VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
             + C  ACG NA C+ + ++PVC+CP  F  +   A+ GC R +S C  D +C  G   C
Sbjct: 1958 QNPCDNACGSNAECKVINRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDC--GGALC 2015

Query: 247  IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
              G+CR+AC +  DCS+GE C+ ++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct: 2016 YNGQCRIACRNSQDCSDGESCLKNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2075

Query: 307  MICAGSKC 314
              C  +KC
Sbjct: 2076 QSCIENKC 2083

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.919	13.54	0.474	9.4e-83
UNIPROTKB|I3LB93	1250	NOTCH3 "Uncharacterized protei	0.820	0.212	0.287	1.4e-15
UNIPROTKB|D4ACI7	247	D4ACI7 "Uncharacterized protei	0.706	0.927	0.273	6.7e-14
UNIPROTKB|F1M4R9	188	F1M4R9 "Uncharacterized protei	0.438	0.755	0.327	1e-13
UNIPROTKB|F1NPG7	2291	Gga.56200 "Uncharacterized pro	0.506	0.071	0.305	1.5e-13
MGI|MGI:1918873	189	Krtap5-2 "keratin associated p	0.521	0.894	0.322	2.5e-13
UNIPROTKB|F1PLM0	1780	VWDE "Uncharacterized protein"	0.839	0.152	0.286	4.9e-13
UNIPROTKB|Q5VY43	1037	PEAR1 "Platelet endothelial ag	0.814	0.254	0.289	5.6e-13
UNIPROTKB|D4A2S7	287	D4A2S7 "Uncharacterized protei	0.734	0.829	0.278	7.8e-13
WB|WBGene00013416	1714	Y64G10A.7 [Caenorhabditis eleg	0.759	0.143	0.286	2.4e-12

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 856 (306.4 bits), Expect = 9.4e-83, P = 9.4e-83
 Identities = 146/308 (47%), Positives = 187/308 (60%)

Query:    10 TLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVPCVHNHDCSTS 66
             TL C  +CD V CG  AVCV NNH+A+C CPPG + GDP      C+ VPCV+NHDC  S
Sbjct:  1783 TLGCRPACDTVKCGPRAVCVTNNHQAQCQCPPGPFAGDPYDPFNGCQSVPCVYNHDCPPS 1842

Query:    67 HACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS 126
               C+ ++HTC   CD  +CG NA+C+ EDHR VC CP G    P P+V C ++   C  +
Sbjct:  1843 QMCNRMTHTCFDVCDEESCGDNAICLAEDHRAVCQCPPGFKGDPLPEVACTKQGG-CA-A 1900

Query:   127 NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQC 186
               CHP+A CE T    G V C CP L VGD    GC P GQCP GDADCP ++ C+GG C
Sbjct:  1901 GTCHPSAICEVT--PEGPV-CKCPPLFVGDAKSGGCRPDGQCPNGDADCPANTICAGGVC 1957

Query:   187 VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKC 246
              + C  ACG NA C+ + ++PVC+CP  F  +   A+ GC R +S C  D +C  G   C
Sbjct:  1958 QNPCDNACGSNAECKVINRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDC--GGALC 2015

Query:   247 IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQ 306
               G+CR+AC +  DCS+GE C+ ++C   C  HSQC +G AC  G C +GCR N+EC   
Sbjct:  2016 YNGQCRIACRNSQDCSDGESCLKNVCVVACLDHSQCASGLACVEGHCTIGCRSNKECKQD 2075

Query:   307 MICAGSKC 314
               C  +KC
Sbjct:  2076 QSCIENKC 2083

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|I3LB93 NOTCH3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 222 (83.2 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 89/310 (28%), Positives = 105/310 (33%)

Query:    15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVG---DPNIECRQVPCVHN--HDCSTSHAC 69
             N C    CG    CV   +  RC CPPGS       P+  C Q PC H   HD      C
Sbjct:   620 NECASSPCGEGGSCVDGENGFRCLCPPGSLPPLCLPPSHPCAQEPCSHGVCHDAPGGFRC 679

Query:    70 DLLSHTCIPACDSGACG---TNAVCIPEDHRPVCHCP---VGTHPSPSPDVHCARESNLC 123
                   C P      C    T   C     R    C     G H +  P V   R+  L 
Sbjct:   680 -----VCEPGWSGPQCSQSLTRDACESHPCRAGSTCTSDATGFHCTCPPGVQ-GRQCELL 733

Query:   124 RDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRG--DADCPPSS 179
                  NPC     CE   AT   VVCSCP     DP    C+  G C  G     C    
Sbjct:   734 SPCVPNPCEHGGHCES--ATGQLVVCSCPSGWQADP----CLNGGSCQDGVGSFSCSCLP 787

Query:   180 RCSGGQC---VSVCQGA-CGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAG 235
               +G +C   V  C  + CGP      V     C CP G+   GG     C +++  C+ 
Sbjct:   788 GFAGPRCARDVDECLSSPCGPGTCTDHVASF-TCTCPPGY---GG---FRCEQDLPDCS- 839

Query:   236 DQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTCEL 295
                C  G   C+ G     CL     + G  C       PC S   C  G  C A     
Sbjct:   840 PSSCFNGGT-CVDGVTSFTCLCRPGYT-GAHCQHEA--DPCLSRP-CLHGGICTAAHPGF 894

Query:   296 GCRQNEECSG 305
              C   E  +G
Sbjct:   895 RCACPEGFTG 904

GO:0072104 "glomerular capillary formation" evidence=IEA

GO:0048663 "neuron fate commitment" evidence=IEA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|D4ACI7 D4ACI7 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 183 (69.5 bits), Expect = 6.7e-14, P = 6.7e-14
 Identities = 70/256 (27%), Positives = 89/256 (34%)

Query:    52 CRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPS 111
             C Q  C     C T+  C   +  C P+C   +C   + C+    RP C   V   P+  
Sbjct:    15 CGQ-GCCQPSCCQTT-CCR--TTCCRPSCCVSSCCRPSCCVSSCCRPSCCQSVCCQPTCC 70

Query:   112 PDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY--KTGCVPQGQCP 169
                 C R S  C  S+ C P+  C  +   +      C +     P   +  C     C 
Sbjct:    71 RPPTCCRPS--CCISSCCRPSC-CRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCRPSCCI 127

Query:   170 RGDA-DCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFR 228
                   C  SS C G  C   C+  C  ++ CR     P C CP     V G  R  C  
Sbjct:   128 SSCCRPCCGSSSCCGSSC---CRPTCCISSCCR-----PSCCCPS--CCVSGCCRPQCC- 176

Query:   229 EMSACAGDQECLAGEEKCIGGRC-RVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQA 287
              +S+C     C  G   C G  C R AC   S C     C  S C S C    QC T   
Sbjct:   177 -ISSCCCRPCC--GSSSCCGSSCCRPACCI-SSCCRPSCCRPSCCVSSCC-RPQCCTTTC 231

Query:   288 CQAGTCELGCRQNEEC 303
             C+   C   C     C
Sbjct:   232 CRTTCCRPSCSSGSCC 247

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|F1M4R9 F1M4R9 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 155 (59.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 53/162 (32%), Positives = 61/162 (37%)

Query:   146 VCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSV--CQGACGPNALCRAV 203
             VCSC   S G   K GC   G C  G   C     C GG C S   C+G CG    C + 
Sbjct:    36 VCSCS--SCGG-CKGGCGSCGGCKGGCGSC---GGCKGG-CGSCGGCKGGCGSCGGCGSC 88

Query:   204 GKRPV-CACPDGFSAVGGEARVGCFREMSACAGDQECLAGEE-KCIGGRCRVACLSHSDC 261
             G R   C    G  + GG  + GC     +C G   C       C    C   C   S C
Sbjct:    89 GGRKGGCGSCGGCGSCGG-CKGGC----GSCGGCDSCGGCSSCGCCQSSCCKPCCCQSSC 143

Query:   262 SEGERCISSLCQS----PCTSHSQCPTGQACQAGTCELGCRQ 299
              +   C SS C+S    PC   S C     CQ+  C   C Q
Sbjct:   144 CKPCCCQSSCCKSSCCKPCCCQSSCCKPCCCQSSCCAPVCCQ 185

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|F1NPG7 Gga.56200 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 154 (59.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 59/193 (30%), Positives = 81/193 (41%)

Query:    16 SC-DGVSCGVNAVCVVNNHEARCF-CPPGSYVGDPNIECRQV-PCVH---NHDCSTSHAC 69
             +C DG+      +C        C  C  G+  G P  +C+ V  CVH   N D +   +C
Sbjct:   126 TCLDGIQRNGTCICKEQYSGFACQNCRDGNRFG-P--DCQSVCDCVHGECNSDVAGKTSC 182

Query:    70 DLLS-HT---C---IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNL 122
                  +T   C   IP C S  C  N+ C+ +D   +C+C +G   S S    C  +   
Sbjct:   183 TCYGGYTGPRCDQEIPLCKSMRCEANSECVVKDGTAMCNCKLGYRKSGSV---CVAQDP- 238

Query:   123 CRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSS-RC 181
             C  S+PC P A C+  G    K  C+C E   GD     C P   C   +  CP +S  C
Sbjct:   239 CT-SSPCSPFAVCKFLGPR--KYECTCKEGYQGDGRV--CQPINPCVDNNGGCPENSTNC 293

Query:   182 --SG-GQCVSVCQ 191
                G GQ   VC+
Sbjct:   294 IYKGPGQASCVCK 306

GO:0005540 "hyaluronic acid binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005041 "low-density lipoprotein receptor activity" evidence=IEA

GO:0005044 "scavenger receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007267 "cell-cell signaling" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0030169 "low-density lipoprotein particle binding" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0051635 "bacterial cell surface binding" evidence=IEA

MGI|MGI:1918873 Krtap5-2 "keratin associated protein 5-2" [Mus musculus (taxid:10090)]

 Score = 178 (67.7 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 62/192 (32%), Positives = 69/192 (35%)

Query:   116 CARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADC 175
             C      C  SN C P   C+          CSC   S GD  K GC   G C  G   C
Sbjct:    10 CGSSCGGC-GSNCCKPVCCCKPVCCC--VPACSCS--SCGD-CKGGCGSCGGCKGGCGSC 63

Query:   176 PPSSRCSGGQCVSV--CQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVG-CFREMSA 232
                  C GG C S   C+G CG    C + G      C  G S+ GG    G C     +
Sbjct:    64 ---GGCKGG-CGSCGGCKGGCGSCGGCGSCG-----GCKGGCSSCGGCGSCGGCKGGCGS 114

Query:   233 CAGDQECLA-GEEKCIGGRCRVACLSHSDCSEGERCISSLCQS----PCTSHSQCPTGQA 287
             C G   C   G   C    C   C   S C +   C SS CQS    PC   S C     
Sbjct:   115 CGGCGSCGGCGSCGCCQSSCCKPCCCQSSCCKPCCCQSSCCQSSCCKPCCCQSSCCKPCC 174

Query:   288 CQAGTCELGCRQ 299
             CQ+  C   C Q
Sbjct:   175 CQSSCCAPVCCQ 186

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|F1PLM0 VWDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 203 (76.5 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 97/339 (28%), Positives = 133/339 (39%)

Query:    15 NSCDGVSC--GVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLL 72
             ++C G  C  GV+ V   + H     CP G Y GD  I CR + C   H C  S  C + 
Sbjct:  1447 STCAGSPCFLGVSCVPTTDGHFQCGRCPFG-YYGD-GINCRAI-C--RHPCGKSREC-VA 1500

Query:    73 SHTCIPACDSGACGTN---AVCIPE--DH----RP-VCHCPVGTHPSPSPDVHCA---RE 119
              + C   C  G  G+N   AVC P+  +H    +P +C CP G   +   + HC+   + 
Sbjct:  1501 PNIC--KCKPGYTGSNCQTAVCHPDCKNHGKCIKPNICDCPPGHGGATCDEEHCSPPCQH 1558

Query:   120 SNLCRDSNPCH-PTA----RCE----DTGATNGKV-----VCSCPELSVGDPYKTG-CVP 164
                C   N C  P      RCE    +    NG       +C C     G    T  C P
Sbjct:  1559 GGTCLAGNLCTCPYGFIGPRCETMVCNRHCENGGECLTPDICQCKPGWYGPTCGTALCDP 1618

Query:   165 QGQCPRGDADC--PPSSRCSGGQCVSVCQGA-CGPNALCRAVGK---RPVCACPDGFSAV 218
                C  G + C  P +  C  G   + CQ A C P   C+  G+     VCAC +G++  
Sbjct:  1619 V--CLNGGS-CNKPNTCLCPNGFFGAQCQNAICHPP--CKNGGRCMRNNVCACREGYA-- 1671

Query:   219 GGEARVGCFREMSACAGDQECLAGEEKCI------GGRCRVACLSHSDCSEGERCIS-SL 271
             G   +      M  C    +C+ G   C       G +C +A L    C  G  CI+ S+
Sbjct:  1672 GKRCQKSICDPM--CMNGGKCV-GPNICSCPSGWRGKQCNIA-LCFQKCKNGGECIAPSI 1727

Query:   272 CQSPCTSHSQCPTGQACQAGTCELGCRQNEECSGQMICA 310
             C  P T       GQ CQ   C+  C     C    +C+
Sbjct:  1728 CHCPTTWEG----GQ-CQIPICKQKCLYGGRCVFPNVCS 1761

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q5VY43 PEAR1 "Platelet endothelial aggregation receptor 1" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 94/325 (28%), Positives = 116/325 (35%)

Query:    28 CVVNNHEARCFCPP--------GSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPA 79
             C    +E+R FC P        G  V  PN +C+ VP     DCS+  A  +    C   
Sbjct:    90 CCHGFYESRGFCVPLCAQECVHGRCVA-PN-QCQCVPGWRGDDCSSECAPGMWGPQCDKP 147

Query:    80 CDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE--SNLCRDSNPCHPTARCE- 136
             C   +CG N+ C P+    VC CP G  P P+    C        C+    CH  A C+ 
Sbjct:   148 C---SCGNNSSCDPKSG--VCSCPSGLQP-PNCLQPCTPGYYGPACQFRCQCHG-APCDP 200

Query:   137 DTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACG- 195
              TGA      C CP    G      C  QG        CP +  C  G      QG+C  
Sbjct:   201 QTGA------CFCPAERTGPSCDVSC-SQGT---SGFFCPSTHSCQNGGVFQTPQGSCSC 250

Query:   196 PNALCRAVGKRPVCACPDGFSAVGGEARVGCFRE--MSACAGDQECLAG------EEKCI 247
             P      +   P   CP+GF          C          G   C  G       E+C 
Sbjct:   251 PPGWMGTICSLP---CPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRCREECP 307

Query:   248 GGRCRVACLSHSDCSEGERCISS----LCQ-----SPCTSHSQCPTG---QACQAG-TCE 294
              GR    C    DC+   RC  +    LC+       CT    CP G    +CQA  TC+
Sbjct:   308 VGRFGQDCAETCDCAPDARCFPANGACLCEHGFTGDRCTDRL-CPDGFYGLSCQAPCTCD 366

Query:   295 ----LGCR-QNEECSGQMICAGSKC 314
                 L C   N ECS     AG  C
Sbjct:   367 REHSLSCHPMNGECSCLPGWAGLHC 391

GO:0016021 "integral to membrane" evidence=IEA

GO:0001891 "phagocytic cup" evidence=IEA

GO:0043654 "recognition of apoptotic cell" evidence=IEA

UNIPROTKB|D4A2S7 D4A2S7 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 187 (70.9 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 76/273 (27%), Positives = 97/273 (35%)

Query:    52 CRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPS 111
             CR   CV +  C     C   S  C P C   +C  ++ C P   RP C       PS  
Sbjct:    35 CRPSCCVSS--CCRPQCCQ--SVCCQPTCCRPSCCISSCCRPSCCRPSCCVSSCCRPSCC 90

Query:   112 PDVHCARESNLCRDS----NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQ 167
                 C R S  CR S    + C P   C+    T  +  C  P   +    +  C     
Sbjct:    91 ISRLCCRPS-CCRPSCCVSSCCRPQC-CQSP--TCCRPSCCRPSCCISSCCRPSCCRPSC 146

Query:   168 CPRGDADCPPSSRCSGGQCVSVCQGA--CGPNALCR---AVGK--RPVCACPDGFSAVGG 220
             C    + C PS  C    C   C G+  C  ++ CR    +    RP C CP     V G
Sbjct:   147 CV--SSCCRPS--CCISSCCRPCCGSSSCCGSSCCRPTCCISSCCRPSCCCPS--CCVSG 200

Query:   221 EARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHS 280
               R  C   +S+C   Q C +    C    CR +C   S C     C+ S C+  C   S
Sbjct:   201 CCRPHCC--VSSCCRPQCCQS--VCCQPTCCRPSCCRPS-CCRPSCCVPSCCRPSCCVSS 255

Query:   281 ----QCPTGQACQAGTCELGCRQNEECSGQMIC 309
                 QC T   CQ   C   C +   CS    C
Sbjct:   256 CCRPQCCTPTCCQTTCCRTTCCR-PSCSSGSCC 287

GO:0045095 "keratin filament" evidence=IEA

WB|WBGene00013416 Y64G10A.7 [Caenorhabditis elegans (taxid:6239)]

 Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 87/304 (28%), Positives = 107/304 (35%)

Query:    21 SCGVNAVCVVNNHEARCFCPPGSYVGDP-NIEC---RQVP-CVHNHDCSTSHACDLLSHT 75
             SC    VC  ++    C CPPG Y+G    I C   R  P C    +C     CD L+  
Sbjct:  1407 SCENGGVC--DSSTGSCVCPPG-YIGTKCEIACQSDRFGPTCEKICNCENGGTCDRLTGQ 1463

Query:    76 C--IPACDSGACGTNAVCIPEDH-----RPVCHCPVGTHPSPSPDVHCARESNLCRDSNP 128
             C  +P      C  N VC PE       +  C C  G         HC   S  C+  N 
Sbjct:  1464 CRCLPGFTGMTC--NQVC-PEGRFGAGCKEKCRCANG---------HCNASSGECK-CNL 1510

Query:   129 CHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC-P-RGDADCPPS---SRCS- 182
                   CE +   +GK   +C            C  Q +C P +G  DCPP    SRC  
Sbjct:  1511 GFTGPSCEQS-CPSGKYGLNCT-------LDCECYGQARCDPVQGCCDCPPGRYGSRCQF 1562

Query:   183 -------GGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAG 235
                    G  C   C  +C   A C     R  C CP GF   G +    C       A 
Sbjct:  1563 SCPNGFYGWYCSQSC--SCQNGAHCDGADGR--CLCPAGFQ--GDKCEQKCSEGSFGPAC 1616

Query:   236 DQECLAGEEKC--IGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTC 293
              Q+C  G+ KC    G+C      H    E E C        C +  QC  G  C A T 
Sbjct:  1617 SQQCNCGKYKCDATDGKCICPVGRHGPLCE-EECRPGRYGQSCQNKCQCFNGATCDARTG 1675

Query:   294 ELGC 297
             +  C
Sbjct:  1676 QCSC 1679

GO:0005509 "calcium ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	324
KOG1214|consensus	1289		99.41
KOG1219|consensus	4289		99.27
KOG1219|consensus	4289		99.22
KOG1214|consensus	1289		99.22
KOG1217|consensus	487		99.02
KOG1217|consensus	487		98.99
KOG4289|consensus	2531		98.72
KOG4260|consensus	350		98.55
KOG4289|consensus	2531		98.54
KOG1225|consensus	525		98.2
KOG1225|consensus	525		98.07
KOG4260|consensus	350		97.96
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	97.92
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.89
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.89
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.73
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.49
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.4
PF12662	24	cEGF: Complement Clr-like EGF-like	97.4
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.38
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.25
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.2
PF12662	24	cEGF: Complement Clr-like EGF-like	97.16
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.95
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.83
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.67
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.48
smart00181	35	EGF Epidermal growth factor-like domain.	96.2
KOG1226|consensus	783		96.17
smart00181	35	EGF Epidermal growth factor-like domain.	96.06
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.28
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.15
KOG1226|consensus	783		95.11
KOG0994|consensus	1758		92.87
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	92.86
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	92.26
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	91.11
PF04706	52	Dickkopf_N: Dickkopf N-terminal cysteine-rich regi	91.03
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	91.02
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	90.2
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	89.25
KOG0994|consensus	1758		88.6
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	88.27
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	85.13
PF04706	52	Dickkopf_N: Dickkopf N-terminal cysteine-rich regi	84.85

>KOG1214|consensus

Probab=99.41  E-value=1.3e-12  Score=128.03  Aligned_cols=151  Identities=25%  Similarity=0.564  Sum_probs=113.8

Q ss_pred             CCCCCCCCEeeeC-CCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCCCEEeeCC
Q psy9427          19 GVSCGVNAVCVVN-NHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTNAVCIPED   95 (324)
Q Consensus        19 ~~~C~~~~~C~~~-~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~~~C~~~~   95 (324)
                      +.-|..++.|... .-.|+|.|..| |.|++. .|.+                      +++|..  ..|+.++.|++.+
T Consensus       699 sh~cdt~a~C~pg~~~~~tcecs~g-~~gdgr-~c~d----------------------~~eca~~~~~CGp~s~Cin~p  754 (1289)
T KOG1214|consen  699 SHMCDTTARCHPGTGVDYTCECSSG-YQGDGR-NCVD----------------------ENECATGFHRCGPNSVCINLP  754 (1289)
T ss_pred             CcccCCCccccCCCCcceEEEEeec-cCCCCC-CCCC----------------------hhhhccCCCCCCCCceeecCC
Confidence            4567888889754 45799999999 888654 4555                      667753  5699999999999


Q ss_pred             CCcEeeCCCCCcCCCCCCCcccccC-----CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427          96 HRPVCHCPVGTHPSPSPDVHCARES-----NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP  169 (324)
Q Consensus        96 ~~~~C~C~~G~~g~~~~~~~C~~~~-----~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~  169 (324)
                      ++|.|.|..||...... .+|..+.     +.|... ..|+..++++-+...-+.|+|+|.+||.|++.  .|.+++||.
T Consensus       755 g~~rceC~~gy~F~dd~-~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~--~c~dvDeC~  831 (1289)
T KOG1214|consen  755 GSYRCECRSGYEFADDR-HTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDGH--QCTDVDECS  831 (1289)
T ss_pred             CceeEEEeecceeccCC-cceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEeecCCccCCcc--ccccccccC
Confidence            99999999998754433 5676542     445332 35655554443222556799999999999984  499999983


Q ss_pred             CCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         170 RGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       170 ~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                        ..                   .|+.+|.|.+++|+|.|+|.+||.|
T Consensus       832 --ps-------------------rChp~A~CyntpgsfsC~C~pGy~G  858 (1289)
T KOG1214|consen  832 --PS-------------------RCHPAATCYNTPGSFSCRCQPGYYG  858 (1289)
T ss_pred             --cc-------------------ccCCCceEecCCCcceeecccCccC
Confidence              21                   5889999999999999999999997

>KOG1219|consensus

Probab=99.27  E-value=1.1e-11  Score=131.12  Aligned_cols=110  Identities=26%  Similarity=0.704  Sum_probs=98.2

Q ss_pred             cCCCCCCCCCCCEeeeC-CCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEee
Q psy9427          15 NSCDGVSCGVNAVCVVN-NHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIP   93 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~   93 (324)
                      ++|..+||+++|+|... .+.|+|.|++. |+|.   .|+..                     +++|.++||..+++|+.
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsq-ysG~---~CEi~---------------------~epC~snPC~~GgtCip 3919 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQ-YSGN---HCEID---------------------LEPCASNPCLTGGTCIP 3919 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCccc-ccCc---ccccc---------------------cccccCCCCCCCCEEEe
Confidence            78999999999999965 67899999999 9995   34432                     78999999999999999


Q ss_pred             CCCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427          94 EDHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus        94 ~~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                      ..+.|.|.|+.||+|     .+|+.. +++| ..++|..++.|+|   ++|+|.|.|.+||.|..+
T Consensus      3920 ~~n~f~CnC~~gyTG-----~~Ce~~Gi~eC-s~n~C~~gg~C~n---~~gsf~CncT~g~~gr~c 3976 (4289)
T KOG1219|consen 3920 FYNGFLCNCPNGYTG-----KRCEARGISEC-SKNVCGTGGQCIN---IPGSFHCNCTPGILGRTC 3976 (4289)
T ss_pred             cCCCeeEeCCCCccC-----ceeeccccccc-ccccccCCceeec---cCCceEeccChhHhcccC
Confidence            999999999999999     889764 5999 8899999999999   999999999999998763

>KOG1219|consensus

Probab=99.22  E-value=2.5e-11  Score=128.34  Aligned_cols=110  Identities=24%  Similarity=0.605  Sum_probs=95.1

Q ss_pred             cCCCCCCCCCCCCEEeeC-CCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCcc
Q psy9427          77 IPACDSGACGTNAVCIPE-DHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVG  155 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g  155 (324)
                      .++|..+||+++++|..+ .++|.|.|++-|.|     +.|+..++.| ..+||..+++|+.   ..+.|.|.|+.||+|
T Consensus      3864 ~d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG-----~~CEi~~epC-~snPC~~GgtCip---~~n~f~CnC~~gyTG 3934 (4289)
T KOG1219|consen 3864 TDPCNDNPCQHGGTCISQPKGGYKCKCPSQYSG-----NHCEIDLEPC-ASNPCLTGGTCIP---FYNGFLCNCPNGYTG 3934 (4289)
T ss_pred             ccccccCcccCCCEecCCCCCceEEeCcccccC-----cccccccccc-cCCCCCCCCEEEe---cCCCeeEeCCCCccC
Confidence            378888999999999966 46799999999999     9999766999 9999999999999   899999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCcc-CCCCCCeeeeCCCCceeeCCCCCccCC
Q psy9427         156 DPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQG-ACGPNALCRAVGKRPVCACPDGFSAVG  219 (324)
Q Consensus       156 ~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~-~C~~~~~C~~~~g~y~C~C~~Gy~g~~  219 (324)
                      ..++.  +.++||                      .. +|+++|.|+|.+|+|.|.|-+||.|+.
T Consensus      3935 ~~Ce~--~Gi~eC----------------------s~n~C~~gg~C~n~~gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3935 KRCEA--RGISEC----------------------SKNVCGTGGQCINIPGSFHCNCTPGILGRT 3975 (4289)
T ss_pred             ceeec--cccccc----------------------ccccccCCceeeccCCceEeccChhHhccc
Confidence            98541  124555                      22 699999999999999999999999844

>KOG1214|consensus

Probab=99.22  E-value=4.2e-11  Score=117.67  Aligned_cols=133  Identities=27%  Similarity=0.635  Sum_probs=97.0

Q ss_pred             eeecCCcccccC--CCC--CCCCCCCEeeeCCCceeeeeCCCeeec-CCCCCCcccCCCCCCcCCCCCceeCCCCcccCC
Q psy9427           5 FVFYLTLTCWNS--CDG--VSCGVNAVCVVNNHEARCFCPPGSYVG-DPNIECRQVPCVHNHDCSTSHACDLLSHTCIPA   79 (324)
Q Consensus         5 ~~~~~~~~c~~~--C~~--~~C~~~~~C~~~~~~~~C~C~~G~y~g-~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~   79 (324)
                      |.+++ +.|+++  |..  ..|++++.|++.+|+|.|.|..| |.- ++...|..+.=      +..          +++
T Consensus       724 ~~gdg-r~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~g-y~F~dd~~tCV~i~~------pap----------~n~  785 (1289)
T KOG1214|consen  724 YQGDG-RNCVDENECATGFHRCGPNSVCINLPGSYRCECRSG-YEFADDRHTCVLITP------PAP----------ANP  785 (1289)
T ss_pred             cCCCC-CCCCChhhhccCCCCCCCCceeecCCCceeEEEeec-ceeccCCcceEEecC------CCC----------CCc
Confidence            33443 556554  654  46999999999999999999999 653 33344544200      000          444


Q ss_pred             CCC--CCCCCCC--EEeeC-CCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          80 CDS--GACGTNA--VCIPE-DHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        80 C~~--~~C~~~~--~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      |..  +.|..++  .|+.. .+.|.|.|.|||.|++   ..|.++ |+| .++.|++.+.|.+   ++|+|.|+|.+||.
T Consensus       786 Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG---~~c~dv-DeC-~psrChp~A~Cyn---tpgsfsC~C~pGy~  857 (1289)
T KOG1214|consen  786 CEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDG---HQCTDV-DEC-SPSRCHPAATCYN---TPGSFSCRCQPGYY  857 (1289)
T ss_pred             cccCccccCcCCceEEEecCCceEEEeecCCccCCc---cccccc-ccc-CccccCCCceEec---CCCcceeecccCcc
Confidence            542  3455444  44433 3569999999999998   789998 999 8899999999999   99999999999999


Q ss_pred             cCCCCCCCCCC
Q psy9427         155 GDPYKTGCVPQ  165 (324)
Q Consensus       155 g~~~~~~C~~~  165 (324)
                      |++.+  |.+.
T Consensus       858 GDGf~--CVP~  866 (1289)
T KOG1214|consen  858 GDGFQ--CVPD  866 (1289)
T ss_pred             CCCce--ecCC
Confidence            99854  7654

>KOG1217|consensus

Probab=99.02  E-value=9.9e-09  Score=99.65  Aligned_cols=190  Identities=26%  Similarity=0.645  Sum_probs=124.8

Q ss_pred             cCCC--CCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCC-C
Q psy9427          15 NSCD--GVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTN-A   89 (324)
Q Consensus        15 ~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~-~   89 (324)
                      +.|.  ..+|.+++.|.+..++|.|.|++| |.+.....-     .+...|...+.|.+..+.=.+.|..  ..+... +
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~-~~~~~~~~~-----~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~  243 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGSYLCSCPPG-YTGSTCETT-----GNGGTCVDSVACSCPPGARGPECEVSIVECASGDG  243 (487)
T ss_pred             cccccCCCCcCCCcccccCCCCeeEeCCCC-ccCCcCcCC-----CCCceEecceeccCCCCCCCCCcccccccccCCCC
Confidence            5787  346999999999999999999999 887533211     1122222222222221100111211  122222 8


Q ss_pred             EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427          90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP  169 (324)
Q Consensus        90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~  169 (324)
                      +|++..++|.|.+++||++...  ..+.++ ++|+...+|..+++|++   ..+.|.|.|++||+|... ..+.+..+|.
T Consensus       244 ~c~~~~~~~~C~~~~g~~~~~~--~~~~~~-~~C~~~~~c~~~~~C~~---~~~~~~C~C~~g~~g~~~-~~~~~~~~C~  316 (487)
T KOG1217|consen  244 TCVNTVGSYTCRCPEGYTGDAC--VTCVDV-DSCALIASCPNGGTCVN---VPGSYRCTCPPGFTGRLC-TECVDVDECS  316 (487)
T ss_pred             cccccCCceeeeCCCCcccccc--ceeeec-cccCCCCccCCCCeeec---CCCcceeeCCCCCCCCCC-cccccccccc
Confidence            8999999999999999999541  245666 88844324888999999   888899999999999886 3455666663


Q ss_pred             C--CCCCCCCCCcccC-----------------Ccc--c-CCCcc-CCCCCCeeee-CCCCceeeCCCCCcc
Q psy9427         170 R--GDADCPPSSRCSG-----------------GQC--V-SVCQG-ACGPNALCRA-VGKRPVCACPDGFSA  217 (324)
Q Consensus       170 ~--~~~~C~~~~~C~~-----------------~~C--~-d~C~~-~C~~~~~C~~-~~g~y~C~C~~Gy~g  217 (324)
                      .  ....|.....|..                 .+|  . ++|.. .+..++.|++ ..++|.|.|+.+|.+
T Consensus       317 ~~~~~~~c~~g~~C~~~~~~~~~~C~c~~~~~g~~C~~~~~~C~~~~~~~~~~c~~~~~~~~~c~~~~~~~~  388 (487)
T KOG1217|consen  317 PRNAGGPCANGGTCNTLGSFGGFRCACGPGFTGRRCEDSNDECASSPCCPGGTCVNETPGSYRCACPAGFAG  388 (487)
T ss_pred             ccccCCcCCCCcccccCCCCCCCCcCCCCCCCCCccccCCccccCCccccCCEeccCCCCCeEecCCCcccc
Confidence            2  2333444334411                 234  2 36777 6888999999 789999999999986

>KOG1217|consensus

Probab=98.99  E-value=2.7e-08  Score=96.57  Aligned_cols=178  Identities=28%  Similarity=0.626  Sum_probs=120.7

Q ss_pred             CCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCC---CcccC--CCCCCcCCC------CCceeCCCCcc-------c
Q psy9427          16 SCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIE---CRQVP--CVHNHDCST------SHACDLLSHTC-------I   77 (324)
Q Consensus        16 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~---C~~~~--C~~~~~C~~------~~~C~c~~~~C-------i   77 (324)
                      .+...+...+..+....++|.|.|++| |.+.....   |...+  +...+.|..      .+.|.|..+..       .
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~c~c~~g-~~~~~~~~~~~C~~~~~~~~~~~~c~~~~~~~~~~~c~C~~g~~~~~~~~~~  169 (487)
T KOG1217|consen   91 PCRSPCLLLCGECVDCVGSYECTCPPG-YQGTPCEGECECVTGPGVCCIDGSCSNGPGSVGPFRCSCTEGYEGEPCETDL  169 (487)
T ss_pred             cccCCcccCCccccCCCCCceeeCCCc-cccCcCCcceeecCCCCCeeCchhhcCCCCCCCceeeeeCCCcccccccccc
Confidence            344434445556667788999999999 88865443   66654  345556642      56677776633       2


Q ss_pred             CCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCC----ccccc----------CCCCCCC-CCCCCC-CeeecCC
Q psy9427          78 PACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDV----HCARE----------SNLCRDS-NPCHPT-ARCEDTG  139 (324)
Q Consensus        78 ~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~----~C~~~----------~~~C~~~-~~C~~~-~~C~~~~  139 (324)
                      ++|.  ..+|.+++.|.+..++|.|.|++||.+......    .|...          ...|... ..+... ++|.+  
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~~--  247 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGTCVN--  247 (487)
T ss_pred             cccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccccccCCCCcccc--
Confidence            5776  345888899999999999999999998542101    12110          0222111 123323 88999  


Q ss_pred             CCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccC
Q psy9427         140 ATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAV  218 (324)
Q Consensus       140 ~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~  218 (324)
                       +.++|+|.+++||++... ..+.++++|....                    .|.++++|++..+.|.|.|++||.|.
T Consensus       248 -~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~--------------------~c~~~~~C~~~~~~~~C~C~~g~~g~  304 (487)
T KOG1217|consen  248 -TVGSYTCRCPEGYTGDAC-VTCVDVDSCALIA--------------------SCPNGGTCVNVPGSYRCTCPPGFTGR  304 (487)
T ss_pred             -cCCceeeeCCCCcccccc-ceeeeccccCCCC--------------------ccCCCCeeecCCCcceeeCCCCCCCC
Confidence             889999999999998872 2366777774332                    15578999999999999999999983

>KOG4289|consensus

Probab=98.72  E-value=1.3e-08  Score=105.09  Aligned_cols=104  Identities=33%  Similarity=0.742  Sum_probs=85.0

Q ss_pred             CCCCCCCCCCCEeee----------------------CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCC
Q psy9427          16 SCDGVSCGVNAVCVV----------------------NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLS   73 (324)
Q Consensus        16 ~C~~~~C~~~~~C~~----------------------~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~   73 (324)
                      .|...||.+-++|+.                      ..+.++|.||+| |+|+.   |...                  
T Consensus      1181 iClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpG-FTgd~---CeTe------------------ 1238 (2531)
T KOG4289|consen 1181 ICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPG-FTGDY---CETE------------------ 1238 (2531)
T ss_pred             hhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCC-CCccc---ccch------------------
Confidence            477778887777742                      246788999999 99963   3332                  


Q ss_pred             CcccCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc--CCCCCCCCCCCCCCeeecCCCCCCCeeeeCCC
Q psy9427          74 HTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE--SNLCRDSNPCHPTARCEDTGATNGKVVCSCPE  151 (324)
Q Consensus        74 ~~Ci~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~--~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~  151 (324)
                         ||+|-.+||+++++|....++|.|.|++||+|     ..|+..  ..-| .+..|.++++|++.  ..|.|.|.|+.
T Consensus      1239 ---iDlCYs~pC~nng~C~srEggYtCeCrpg~tG-----ehCEvs~~agrC-vpGvC~nggtC~~~--~nggf~c~Cp~ 1307 (2531)
T KOG4289|consen 1239 ---IDLCYSGPCGNNGRCRSREGGYTCECRPGFTG-----EHCEVSARAGRC-VPGVCKNGGTCVNL--LNGGFCCHCPY 1307 (2531)
T ss_pred             ---hHhhhcCCCCCCCceEEecCceeEEecCCccc-----cceeeecccCcc-ccceecCCCEEeec--CCCceeccCCC
Confidence               89999999999999999999999999999999     888753  1456 66789999999984  67889999998


Q ss_pred             C
Q psy9427         152 L  152 (324)
Q Consensus       152 G  152 (324)
                      |
T Consensus      1308 g 1308 (2531)
T KOG4289|consen 1308 G 1308 (2531)
T ss_pred             c
Confidence            8

>KOG4260|consensus

Probab=98.55  E-value=5.2e-08  Score=85.14  Aligned_cols=152  Identities=22%  Similarity=0.458  Sum_probs=95.6

Q ss_pred             CCCCCCCEeee---CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCC
Q psy9427          20 VSCGVNAVCVV---NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDH   96 (324)
Q Consensus        20 ~~C~~~~~C~~---~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~   96 (324)
                      .||..+++|..   ..|+-.|.|.+| |+|.....|-..--.. ..=.....|.    .|..     +|.  +.|.....
T Consensus       150 r~C~GnG~C~GdGsR~GsGkCkC~~G-Y~Gp~C~~Cg~eyfes-~Rne~~lvCt----~Ch~-----~C~--~~Csg~~~  216 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSREGSGKCKCETG-YTGPLCRYCGIEYFES-SRNEQHLVCT----ACHE-----GCL--GVCSGESS  216 (350)
T ss_pred             CCcCCCCcccCCCCCCCCCcccccCC-CCCccccccchHHHHh-hcccccchhh----hhhh-----hhh--cccCCCCC
Confidence            57888899974   367779999999 9997554333200000 0000000000    1111     221  23433222


Q ss_pred             CcEeeCCCCCcCCCCCCCcccccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCC
Q psy9427          97 RPVCHCPVGTHPSPSPDVHCARESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADC  175 (324)
Q Consensus        97 ~~~C~C~~G~~g~~~~~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C  175 (324)
                      +---.|+.||..+.   ..|.|+ |||.. +.+|..+..|+|   +.|+|+|...+||.+.        +++|..-...|
T Consensus       217 k~C~kCkkGW~lde---~gCvDv-nEC~~ep~~c~~~qfCvN---teGSf~C~dk~Gy~~g--------~d~C~~~~d~~  281 (350)
T KOG4260|consen  217 KGCSKCKKGWKLDE---EGCVDV-NECQNEPAPCKAHQFCVN---TEGSFKCEDKEGYKKG--------VDECQFCADVC  281 (350)
T ss_pred             CChhhhcccceecc---cccccH-HHHhcCCCCCChhheeec---CCCceEecccccccCC--------hHHhhhhhhhc
Confidence            22236899999886   789999 99954 458999999999   9999999999999863        33442211111


Q ss_pred             CCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         176 PPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       176 ~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .                  ..+..|.++.++|+|.|++|+.-
T Consensus       282 ~------------------~kn~~c~ni~~~~r~v~f~~~~~  305 (350)
T KOG4260|consen  282 A------------------SKNRPCMNIDGQYRCVCFSGLII  305 (350)
T ss_pred             c------------------cCCCCcccCCccEEEEeccccee
Confidence            1                  24567999999999999999863

>KOG4289|consensus

Probab=98.54  E-value=1.2e-07  Score=98.12  Aligned_cols=92  Identities=29%  Similarity=0.673  Sum_probs=72.7

Q ss_pred             eeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCC
Q psy9427          92 IPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRG  171 (324)
Q Consensus        92 ~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~  171 (324)
                      ++..++++|.|++||+|     ..|+..+|+| -..||.+++.|..   ..|.|+|.|.+||+|+.++.          .
T Consensus      1216 i~pvnglrCrCPpGFTg-----d~CeTeiDlC-Ys~pC~nng~C~s---rEggYtCeCrpg~tGehCEv----------s 1276 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFTG-----DYCETEIDLC-YSGPCGNNGRCRS---REGGYTCECRPGFTGEHCEV----------S 1276 (2531)
T ss_pred             ccccCceeEeCCCCCCc-----ccccchhHhh-hcCCCCCCCceEE---ecCceeEEecCCccccceee----------e
Confidence            45678899999999999     7887655999 8889999999999   89999999999999988431          1


Q ss_pred             CCCCCCCCcccCCcccCCCccCCCCCCeeeeC-CCCceeeCCCC
Q psy9427         172 DADCPPSSRCSGGQCVSVCQGACGPNALCRAV-GKRPVCACPDG  214 (324)
Q Consensus       172 ~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~-~g~y~C~C~~G  214 (324)
                      .+    ..+|+++        .|.++++|++. .|+|.|.||.|
T Consensus      1277 ~~----agrCvpG--------vC~nggtC~~~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1277 AR----AGRCVPG--------VCKNGGTCVNLLNGGFCCHCPYG 1308 (2531)
T ss_pred             cc----cCccccc--------eecCCCEEeecCCCceeccCCCc
Confidence            10    1222222        46689999955 67899999998

>KOG1225|consensus

Probab=98.20  E-value=1.4e-05  Score=77.80  Aligned_cols=20  Identities=25%  Similarity=0.815  Sum_probs=14.2

Q ss_pred             CCCCCeeeeCCCCceeeCCCCCccC
Q psy9427         194 CGPNALCRAVGKRPVCACPDGFSAV  218 (324)
Q Consensus       194 C~~~~~C~~~~g~y~C~C~~Gy~g~  218 (324)
                      |.+++.|++  |   |.|..||+|.
T Consensus       345 C~~~g~cv~--g---C~C~~Gw~G~  364 (525)
T KOG1225|consen  345 CSGGGQCVN--G---CKCKKGWRGP  364 (525)
T ss_pred             cCCCceecc--C---ceeccCccCC
Confidence            556666765  2   8889999873

>KOG1225|consensus

Probab=98.07  E-value=4.2e-05  Score=74.50  Aligned_cols=149  Identities=30%  Similarity=0.704  Sum_probs=89.8

Q ss_pred             cEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCC
Q psy9427          98 PVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPP  177 (324)
Q Consensus        98 ~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~  177 (324)
                      ++|.|+.+|.+     ..|+.  -.|  +..|..++.|+.       -+|.|++||+|+.+..            ..|+ 
T Consensus       234 ~ic~c~~~~~g-----~~c~~--~~C--~~~c~~~g~c~~-------G~CIC~~Gf~G~dC~e------------~~Cp-  284 (525)
T KOG1225|consen  234 GICECPEGYFG-----PLCST--IYC--PGGCTGRGQCVE-------GRCICPPGFTGDDCDE------------LVCP-  284 (525)
T ss_pred             ceeecCCceeC-----Ccccc--ccC--CCCCcccceEeC-------CeEeCCCCCcCCCCCc------------ccCC-
Confidence            47899999998     55653  234  234555677866       3899999999988431            1222 


Q ss_pred             CCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCcCCCCcccCCCCC
Q psy9427         178 SSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQECLAGEEKCIGGRCRVACLS  257 (324)
Q Consensus       178 ~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C~~~~~C~~~~~~C~~~~C~~~C~~  257 (324)
                                    ..|+.++.+++.    +|.|++||+|....... |   +      ++|. ..-.|+.|+|+  |..
T Consensus       285 --------------~~cs~~g~~~~g----~CiC~~g~~G~dCs~~~-c---p------adC~-g~G~Ci~G~C~--C~~  333 (525)
T KOG1225|consen  285 --------------VDCSGGGVCVDG----ECICNPGYSGKDCSIRR-C---P------ADCS-GHGKCIDGECL--CDE  333 (525)
T ss_pred             --------------cccCCCceecCC----EeecCCCcccccccccc-C---C------ccCC-CCCcccCCceE--eCC
Confidence                          135556666553    69999999984333222 3   3      3444 22245555442  111


Q ss_pred             CCCCCCCCcccCCcccCCCCCCCCCCCCCcCCCCcc-----ccccccCCCCCCCCcccCCc
Q psy9427         258 HSDCSEGERCISSLCQSPCTSHSQCPTGQACQAGTC-----ELGCRQNEECSGQMICAGSK  313 (324)
Q Consensus       258 ~~~C~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~c-----~~~C~~~~~C~~~~~C~~~~  313 (324)
                      +   +.|..|...    +|.++++|..+..|+.|+-     .+.+.-..+|+....++...
T Consensus       334 G---y~G~~C~~~----~C~~~g~cv~gC~C~~Gw~G~d~~~~~~~~~~~cs~~~~~~~~~  387 (525)
T KOG1225|consen  334 G---YTGELCIQR----ACSGGGQCVNGCKCKKGWRGPDVADPSLLLITECSPPSLCIAGV  387 (525)
T ss_pred             C---CcCCccccc----ccCCCceeccCceeccCccCCCcCCchhhcccccCCCceeeccc
Confidence            1   344555554    3777788877777777764     23466677777777776654

>KOG4260|consensus

Probab=97.96  E-value=1.2e-05  Score=70.63  Aligned_cols=105  Identities=22%  Similarity=0.469  Sum_probs=69.7

Q ss_pred             CCCCCCCEEe---eCCCCcEeeCCCCCcCCCCCCCccccc--------CCCCC-CCCCCCC--CCeeecCCCCCCCeee-
Q psy9427          83 GACGTNAVCI---PEDHRPVCHCPVGTHPSPSPDVHCARE--------SNLCR-DSNPCHP--TARCEDTGATNGKVVC-  147 (324)
Q Consensus        83 ~~C~~~~~C~---~~~~~~~C~C~~G~~g~~~~~~~C~~~--------~~~C~-~~~~C~~--~~~C~~~~~~~g~~~C-  147 (324)
                      .+|.-++.|.   ...|+..|.|.+||.|     ..|..-        .++=. .-..|+.  .+.|.    ..++-.| 
T Consensus       150 r~C~GnG~C~GdGsR~GsGkCkC~~GY~G-----p~C~~Cg~eyfes~Rne~~lvCt~Ch~~C~~~Cs----g~~~k~C~  220 (350)
T KOG4260|consen  150 RPCFGNGSCHGDGSREGSGKCKCETGYTG-----PLCRYCGIEYFESSRNEQHLVCTACHEGCLGVCS----GESSKGCS  220 (350)
T ss_pred             CCcCCCCcccCCCCCCCCCcccccCCCCC-----ccccccchHHHHhhcccccchhhhhhhhhhcccC----CCCCCChh
Confidence            3455566665   3457789999999999     444321        01100 0012321  12443    2444556 


Q ss_pred             eCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         148 SCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       148 ~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +|..||..+.  ..|.|++||.....                   +|..+..|+|+.|+|+|..++||.+
T Consensus       221 kCkkGW~lde--~gCvDvnEC~~ep~-------------------~c~~~qfCvNteGSf~C~dk~Gy~~  269 (350)
T KOG4260|consen  221 KCKKGWKLDE--EGCVDVNECQNEPA-------------------PCKAHQFCVNTEGSFKCEDKEGYKK  269 (350)
T ss_pred             hhcccceecc--cccccHHHHhcCCC-------------------CCChhheeecCCCceEecccccccC
Confidence            6999999986  56999999965543                   5777889999999999999999985

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=97.92  E-value=3.4e-06  Score=70.25  Aligned_cols=145  Identities=26%  Similarity=0.577  Sum_probs=91.4

Q ss_pred             CCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-----CCCCCCCCEEeeCC
Q psy9427          21 SCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-----SGACGTNAVCIPED   95 (324)
Q Consensus        21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-----~~~C~~~~~C~~~~   95 (324)
                      +|.+ |.-+.+...|.|.|.+| |.....+.|..                      ..+|.     ..+|+..|.|++..
T Consensus         7 ~CKN-G~LiQMSNHfEC~Cneg-fvl~~EntCE~----------------------kv~C~~~e~~~K~Cgdya~C~~~~   62 (197)
T PF06247_consen    7 ICKN-GYLIQMSNHFECKCNEG-FVLKNENTCEE----------------------KVECDKLENVNKPCGDYAKCINQA   62 (197)
T ss_dssp             --BT-EEEEEESSEEEEEESTT-EEEEETTEEEE--------------------------SG-GGTTSEEETTEEEEE-S
T ss_pred             cccC-CEEEEccCceEEEcCCC-cEEcccccccc----------------------ceecCcccccCccccchhhhhcCC
Confidence            4654 57888889999999999 87655455665                      23332     25788899999765


Q ss_pred             -----CCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCC
Q psy9427          96 -----HRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPR  170 (324)
Q Consensus        96 -----~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~  170 (324)
                           ..|.|.|.+||+...   ..|..  +.| ....|+ .+.|+..+..+....|+|.-|++.+. ...|...++   
T Consensus        63 ~~~~~~~~~C~C~~gY~~~~---~vCvp--~~C-~~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~d-n~kCtk~G~---  131 (197)
T PF06247_consen   63 NKGEERAYKCDCINGYILKQ---GVCVP--NKC-NNKDCG-SGKCILDPDNPNNPTCSCNIGKVPDD-NKKCTKTGE---  131 (197)
T ss_dssp             STTSSTSEEEEE-TTEEESS---SSEEE--GGG-SS---T-TEEEEEEEGGGSEEEEEE-TEEETTT-TTESEEEE----
T ss_pred             CcccceeEEEecccCceeeC---CeEch--hhc-CceecC-CCeEEecCCCCCCceeEeeeceEecc-CCcccCCCc---
Confidence                 469999999999865   56765  567 556786 78998521133446999999998333 234543221   


Q ss_pred             CCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         171 GDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       171 ~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                                       .+|...|..+.+|..+.+-|+|.+.+||.+
T Consensus       132 -----------------T~C~LKCk~nE~CK~~~~~Y~C~~~~~~~~  161 (197)
T PF06247_consen  132 -----------------TKCSLKCKENEECKLVDGYYKCVCKEGFPG  161 (197)
T ss_dssp             ------------------------TTTEEEEEETTEEEEEE-TT-EE
T ss_pred             -----------------cceeeecCCCcceeeeCcEEEeecCCCCCC
Confidence                             122235778899999999999999999987

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.89  E-value=1.1e-05  Score=48.22  Aligned_cols=30  Identities=33%  Similarity=0.875  Sum_probs=27.1

Q ss_pred             CCCCCCCCCCEeeeCC-CceeeeeCCCeeecC
Q psy9427          17 CDGVSCGVNAVCVVNN-HEARCFCPPGSYVGD   47 (324)
Q Consensus        17 C~~~~C~~~~~C~~~~-~~~~C~C~~G~y~g~   47 (324)
                      |..+||.++|+|+... ++|+|.|++| |+|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G-~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPG-YTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTT-EEST
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCC-CccC
Confidence            5677999999999888 9999999999 9884

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.89  E-value=8.9e-06  Score=51.94  Aligned_cols=25  Identities=28%  Similarity=0.757  Sum_probs=22.8

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|..+++|+|+.|+|+|.|++||+.
T Consensus        11 ~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen   11 NCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             SSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             cCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            5777899999999999999999983

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.73  E-value=2.3e-05  Score=50.03  Aligned_cols=34  Identities=26%  Similarity=0.621  Sum_probs=28.9

Q ss_pred             CCCCCCC-CCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         121 NLCRDSN-PCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       121 ~~C~~~~-~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      |||+... .|..++.|+|   +.|+|+|.|++||....
T Consensus         3 dEC~~~~~~C~~~~~C~N---~~Gsy~C~C~~Gy~~~~   37 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVN---TEGSYSCSCPPGYELND   37 (42)
T ss_dssp             STTTTTSSSSSTTSEEEE---ETTEEEEEESTTEEECT
T ss_pred             cccCCCCCcCCCCCEEEc---CCCCEEeeCCCCcEECC
Confidence            8995533 7988999999   99999999999998443

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.49  E-value=5.5e-05  Score=45.20  Aligned_cols=29  Identities=31%  Similarity=0.742  Sum_probs=26.1

Q ss_pred             CCCCCCCCCCEEeeCC-CCcEeeCCCCCcC
Q psy9427          80 CDSGACGTNAVCIPED-HRPVCHCPVGTHP  108 (324)
Q Consensus        80 C~~~~C~~~~~C~~~~-~~~~C~C~~G~~g  108 (324)
                      |.+++|.++++|+... ++|.|.|++||+|
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G   30 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTG   30 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCcc
Confidence            4457899999999888 9999999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.40  E-value=0.00024  Score=44.02  Aligned_cols=32  Identities=28%  Similarity=0.680  Sum_probs=28.4

Q ss_pred             cCCCCC-CCCCCCCEEeeCCCCcEeeCCCCCc-C
Q psy9427          77 IPACDS-GACGTNAVCIPEDHRPVCHCPVGTH-P  108 (324)
Q Consensus        77 i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~-g  108 (324)
                      +++|.. .+|.++++|+++.++|.|.|++||+ |
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g   35 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDG   35 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCccC
Confidence            567776 6898889999999999999999999 6

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.40  E-value=0.00017  Score=39.85  Aligned_cols=24  Identities=25%  Similarity=0.450  Sum_probs=21.3

Q ss_pred             CeeeeCCCCCccCCCCCCCCCCCC
Q psy9427         144 KVVCSCPELSVGDPYKTGCVPQGQ  167 (324)
Q Consensus       144 ~~~C~C~~G~~g~~~~~~C~~~~e  167 (324)
                      +|+|+|++||+....+..|.||+|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            589999999998877788999986

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.38  E-value=0.00021  Score=43.89  Aligned_cols=28  Identities=39%  Similarity=0.814  Sum_probs=22.7

Q ss_pred             CCCCCCEeeeCCCceeeeeCCCeeecCCC
Q psy9427          21 SCGVNAVCVVNNHEARCFCPPGSYVGDPN   49 (324)
Q Consensus        21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~   49 (324)
                      .|..+|+|+++.++|.|+|++| |.|+..
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~G-y~GdG~   34 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPG-YEGDGF   34 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CE-EECCST
T ss_pred             CCCCCcEeecCCCCEEeECCCC-CccCCc
Confidence            5889999999999999999999 999754

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.25  E-value=0.00043  Score=42.85  Aligned_cols=31  Identities=35%  Similarity=0.866  Sum_probs=27.5

Q ss_pred             ccCCCC-CCCCCCCEeeeCCCceeeeeCCCeee
Q psy9427          14 WNSCDG-VSCGVNAVCVVNNHEARCFCPPGSYV   45 (324)
Q Consensus        14 ~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~y~   45 (324)
                      +++|.. .+|.++++|++..++|.|.|++| |+
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g-~~   33 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPG-YT   33 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCC-Cc
Confidence            466776 78999999999999999999999 87

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.20  E-value=0.00024  Score=43.62  Aligned_cols=28  Identities=29%  Similarity=0.613  Sum_probs=23.0

Q ss_pred             CCCCCCCEEeeCCCCcEeeCCCCCcCCC
Q psy9427          83 GACGTNAVCIPEDHRPVCHCPVGTHPSP  110 (324)
Q Consensus        83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~  110 (324)
                      ..|..+|+|+++.++|.|+|++||.|++
T Consensus         6 ~~C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCCCcEeecCCCCEEeECCCCCccCC
Confidence            4688899999999999999999999987

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.16  E-value=0.00038  Score=38.47  Aligned_cols=24  Identities=29%  Similarity=0.602  Sum_probs=20.4

Q ss_pred             CcEeeCCCCCcCCCCCCCcccccCCC
Q psy9427          97 RPVCHCPVGTHPSPSPDVHCARESNL  122 (324)
Q Consensus        97 ~~~C~C~~G~~g~~~~~~~C~~~~~~  122 (324)
                      +|.|.|++||+.++.. +.|++| ||
T Consensus         1 sy~C~C~~Gy~l~~d~-~~C~DI-dE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDG-RSCEDI-DE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCC-CccccC-CC
Confidence            6899999999987765 899998 75

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.95  E-value=0.0013  Score=40.11  Aligned_cols=32  Identities=28%  Similarity=0.674  Sum_probs=28.0

Q ss_pred             cCCCCC-CCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427          77 IPACDS-GACGTNAVCIPEDHRPVCHCPVGTHP  108 (324)
Q Consensus        77 i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g  108 (324)
                      +++|.. .+|.+++.|++..+.|.|.|++||+|
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCCCcC
Confidence            466765 68888899999999999999999998

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.83  E-value=0.0015  Score=39.89  Aligned_cols=33  Identities=36%  Similarity=0.888  Sum_probs=28.3

Q ss_pred             ccCCCC-CCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          14 WNSCDG-VSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      +++|.. .+|.+++.|++..+.|+|.|++| |.|.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g-~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCSCPPG-YTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeECCCC-CcCC
Confidence            456766 68988899999999999999999 8873

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.67  E-value=0.0025  Score=38.21  Aligned_cols=28  Identities=43%  Similarity=1.032  Sum_probs=25.2

Q ss_pred             CCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          19 GVSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        19 ~~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      ..+|.++++|++..+.|.|.|++| |.+.
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g-~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPG-YTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCC-Cccc
Confidence            567988999999999999999999 8875

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.48  E-value=0.0048  Score=36.90  Aligned_cols=28  Identities=25%  Similarity=0.625  Sum_probs=25.0

Q ss_pred             CCCCCCCCEEeeCCCCcEeeCCCCCcCC
Q psy9427          82 SGACGTNAVCIPEDHRPVCHCPVGTHPS  109 (324)
Q Consensus        82 ~~~C~~~~~C~~~~~~~~C~C~~G~~g~  109 (324)
                      ..+|.++++|++..+.|.|.|+.||.|+
T Consensus         5 ~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           5 SNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            4678888999999999999999999983

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.20  E-value=0.0061  Score=36.68  Aligned_cols=29  Identities=38%  Similarity=1.014  Sum_probs=24.8

Q ss_pred             CCC-CCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          17 CDG-VSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        17 C~~-~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      |.. .+|.++ +|++..++|+|+|++| |.++
T Consensus         2 C~~~~~C~~~-~C~~~~~~~~C~C~~g-~~g~   31 (35)
T smart00181        2 CASGGPCSNG-TCINTPGSYTCSCPPG-YTGD   31 (35)
T ss_pred             CCCcCCCCCC-EEECCCCCeEeECCCC-CccC
Confidence            445 578888 9999999999999999 8873

>KOG1226|consensus

Probab=96.17  E-value=0.041  Score=55.48  Aligned_cols=142  Identities=26%  Similarity=0.638  Sum_probs=78.0

Q ss_pred             EeeCCCCCcCCCCCCCccccc---------CCCCCCCC---CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCC-C
Q psy9427          99 VCHCPVGTHPSPSPDVHCARE---------SNLCRDSN---PCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVP-Q  165 (324)
Q Consensus        99 ~C~C~~G~~g~~~~~~~C~~~---------~~~C~~~~---~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~-~  165 (324)
                      .|.|.+||.|     ..|+-.         .+.|+..+   +|...+.|.=       -+|+|.+...+.-++..|.- .
T Consensus       479 ~C~C~~G~~G-----~~CEC~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C-------GqC~C~~~~~~~i~G~fCECDn  546 (783)
T KOG1226|consen  479 QCRCDEGWLG-----KKCECSTDELSSSEEEDKCRENSDSPVCSGRGDCVC-------GQCVCHKPDNGKIYGKFCECDN  546 (783)
T ss_pred             ceecCCCCCC-----CcccCCccccCcHhHHhhccCCCCCCCcCCCCcEeC-------CceEecCCCCCceeeeeeeccC
Confidence            5799999999     444321         13443222   5777777754       36788777664333333321 1


Q ss_pred             CCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCCCC--CCccCCCC
Q psy9427         166 GQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAG--DQECLAGE  243 (324)
Q Consensus       166 ~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C~~--~~~C~~~~  243 (324)
                      -.|....+                  ..|+.+++|.=.    +|+|.+||+|.....    ....+.|.+  +..|+ +.
T Consensus       547 fsC~r~~g------------------~lC~g~G~C~CG----~CvC~~GwtG~~C~C----~~std~C~~~~G~iCS-Gr  599 (783)
T KOG1226|consen  547 FSCERHKG------------------VLCGGHGRCECG----RCVCNPGWTGSACNC----PLSTDTCESSDGQICS-GR  599 (783)
T ss_pred             cccccccC------------------cccCCCCeEeCC----cEEcCCCCccCCCCC----CCCCccccCCCCceeC-CC
Confidence            11211111                  157778888653    599999999854321    112444532  35666 33


Q ss_pred             CcCCCCcccCCCCCCCCCCCCCcccC-CcccCCCCCCCCCC
Q psy9427         244 EKCIGGRCRVACLSHSDCSEGERCIS-SLCQSPCTSHSQCP  283 (324)
Q Consensus       244 ~~C~~~~C~~~C~~~~~C~~~~~C~~-~~C~~~C~~~~~C~  283 (324)
                      ..|+=|+|+  |.+..  ..|..|.. ..|..+|..+-.|.
T Consensus       600 G~C~Cg~C~--C~~~~--~sG~~CE~cptc~~~C~~~~~Cv  636 (783)
T KOG1226|consen  600 GTCECGRCK--CTDPP--YSGEFCEKCPTCPDPCAENKSCV  636 (783)
T ss_pred             ceeeCCceE--cCCCC--cCcchhhcCCCCCCcccccccch
Confidence            356666553  33332  45666644 56666777766665

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.06  E-value=0.0092  Score=35.88  Aligned_cols=28  Identities=36%  Similarity=0.876  Sum_probs=24.0

Q ss_pred             CCC-CCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427          80 CDS-GACGTNAVCIPEDHRPVCHCPVGTHP  108 (324)
Q Consensus        80 C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g  108 (324)
                      |.. .+|.++ +|+++.++|.|.|++||.|
T Consensus         2 C~~~~~C~~~-~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        2 CASGGPCSNG-TCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCcCCCCCC-EEECCCCCeEeECCCCCcc
Confidence            444 578777 9999999999999999998

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.28  E-value=0.013  Score=35.90  Aligned_cols=26  Identities=27%  Similarity=0.390  Sum_probs=20.7

Q ss_pred             CCeeecCCCCCCCeeeeCCCCCccCCCCC
Q psy9427         132 TARCEDTGATNGKVVCSCPELSVGDPYKT  160 (324)
Q Consensus       132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~  160 (324)
                      ...|++   ++++|+|.|++||++....+
T Consensus         9 ~h~C~~---~~g~~~C~C~~Gy~L~~D~~   34 (36)
T PF14670_consen    9 SHICVN---TPGSYRCSCPPGYKLAEDGR   34 (36)
T ss_dssp             SSEEEE---ETTSEEEE-STTEEE-TTSS
T ss_pred             CCCCcc---CCCceEeECCCCCEECcCCC
Confidence            578999   99999999999999877543

...

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.15  E-value=0.014  Score=35.68  Aligned_cols=23  Identities=22%  Similarity=0.598  Sum_probs=19.1

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCC
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPS  111 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~  111 (324)
                      ..|++++++|+|.|++||++.+.
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L~~D   32 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKLAED   32 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE-TT
T ss_pred             CCCccCCCceEeECCCCCEECcC
Confidence            68999999999999999998654

...

>KOG1226|consensus

Probab=95.11  E-value=0.43  Score=48.41  Aligned_cols=117  Identities=23%  Similarity=0.533  Sum_probs=63.6

Q ss_pred             CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCC--CCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCC
Q psy9427          84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCR--DSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTG  161 (324)
Q Consensus        84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~--~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~  161 (324)
                      +|...+.|.=    ..|.|.+...+.-++ ..|+-+--.|.  ....|..+++|.=       -+|+|.+||+|..++  
T Consensus       515 vCSgrG~C~C----GqC~C~~~~~~~i~G-~fCECDnfsC~r~~g~lC~g~G~C~C-------G~CvC~~GwtG~~C~--  580 (783)
T KOG1226|consen  515 VCSGRGDCVC----GQCVCHKPDNGKIYG-KFCECDNFSCERHKGVLCGGHGRCEC-------GRCVCNPGWTGSACN--  580 (783)
T ss_pred             CcCCCCcEeC----CceEecCCCCCceee-eeeeccCcccccccCcccCCCCeEeC-------CcEEcCCCCccCCCC--
Confidence            5666666652    147777766631111 66765312231  1225888888865       389999999999875  


Q ss_pred             CC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCC-CccCCCCCCCCccccCCCCCCCCcc
Q psy9427         162 CV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDG-FSAVGGEARVGCFREMSACAGDQEC  239 (324)
Q Consensus       162 C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~G-y~g~~~~~~~~C~~~~~~C~~~~~C  239 (324)
                      |. +.+.|...++.                  .|...++|.=.    +|.|-+. |.|...+.-..|   .+.|....+|
T Consensus       581 C~~std~C~~~~G~------------------iCSGrG~C~Cg----~C~C~~~~~sG~~CE~cptc---~~~C~~~~~C  635 (783)
T KOG1226|consen  581 CPLSTDTCESSDGQ------------------ICSGRGTCECG----RCKCTDPPYSGEFCEKCPTC---PDPCAENKSC  635 (783)
T ss_pred             CCCCCccccCCCCc------------------eeCCCceeeCC----ceEcCCCCcCcchhhcCCCC---CCcccccccc
Confidence            43 33444322211                  34445555432    4777666 876433333333   3445555544

>KOG0994|consensus

Probab=92.87  E-value=0.48  Score=50.11  Aligned_cols=63  Identities=22%  Similarity=0.439  Sum_probs=36.4

Q ss_pred             EEeeCCCCcEe-eCCCCCcCCCCCCCcccccCCCCCCCCCCCCC--------CeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427          90 VCIPEDHRPVC-HCPVGTHPSPSPDVHCARESNLCRDSNPCHPT--------ARCEDTGATNGKVVCSCPELSVGDPYK  159 (324)
Q Consensus        90 ~C~~~~~~~~C-~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~--------~~C~~~~~~~g~~~C~C~~G~~g~~~~  159 (324)
                      .|.....++.| +|..||.|+|.-   =..  ..| .+-||..+        ..|.- +.......|.|.+||+|..+.
T Consensus       877 ~CqD~T~G~~CdrCl~GyyGdP~l---g~g--~~C-rPCpCP~gp~Sg~~~A~sC~~-d~~t~~ivC~C~~GY~G~RCe  948 (1758)
T KOG0994|consen  877 DCQDSTTGHSCDRCLDGYYGDPRL---GSG--IGC-RPCPCPDGPASGRQHADSCYL-DTRTQQIVCHCQEGYSGSRCE  948 (1758)
T ss_pred             cccccccccchhhhhccccCCccc---CCC--CCC-CCCCCCCCCccchhccccccc-cccccceeeecccCccccchh
Confidence            34555666777 799999998852   111  223 22233221        12221 113455789999999998863

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=92.86  E-value=0.17  Score=30.02  Aligned_cols=25  Identities=36%  Similarity=0.852  Sum_probs=20.7

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      ..|.++++|+...+  +|+|.+| |+|+
T Consensus         6 ~~C~~~G~C~~~~g--~C~C~~g-~~G~   30 (32)
T PF07974_consen    6 NICSGHGTCVSPCG--RCVCDSG-YTGP   30 (32)
T ss_pred             CccCCCCEEeCCCC--EEECCCC-CcCC
Confidence            35889999987644  8999999 8885

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=92.26  E-value=0.1  Score=43.94  Aligned_cols=106  Identities=28%  Similarity=0.710  Sum_probs=65.0

Q ss_pred             CCCCCCCEeeeCC-----CceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeC
Q psy9427          20 VSCGVNAVCVVNN-----HEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPE   94 (324)
Q Consensus        20 ~~C~~~~~C~~~~-----~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~   94 (324)
                      .+|+.-|.|++..     ..|.|.|.+| |..... .|.+                       +.|....|+ .+.|+..
T Consensus        50 K~Cgdya~C~~~~~~~~~~~~~C~C~~g-Y~~~~~-vCvp-----------------------~~C~~~~Cg-~GKCI~d  103 (197)
T PF06247_consen   50 KPCGDYAKCINQANKGEERAYKCDCING-YILKQG-VCVP-----------------------NKCNNKDCG-SGKCILD  103 (197)
T ss_dssp             SEEETTEEEEE-SSTTSSTSEEEEE-TT-EEESSS-SEEE-----------------------GGGSS---T-TEEEEEE
T ss_pred             ccccchhhhhcCCCcccceeEEEecccC-ceeeCC-eEch-----------------------hhcCceecC-CCeEEec
Confidence            4799999998654     6799999999 876432 3444                       444445676 5788843


Q ss_pred             ---CCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427          95 ---DHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus        95 ---~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                         +....|+|.-|+..+..  ..|... ..+|  .-.|..+..|..   +.+-|+|.+..||.++..
T Consensus       104 ~~~~~~~~CSC~IGkV~~dn--~kCtk~G~T~C--~LKCk~nE~CK~---~~~~Y~C~~~~~~~~~~~  164 (197)
T PF06247_consen  104 PDNPNNPTCSCNIGKVPDDN--KKCTKTGETKC--SLKCKENEECKL---VDGYYKCVCKEGFPGDGE  164 (197)
T ss_dssp             EGGGSEEEEEE-TEEETTTT--TESEEEE----------TTTEEEEE---ETTEEEEEE-TT-EEETT
T ss_pred             CCCCCCceeEeeeceEeccC--CcccCCCccce--eeecCCCcceee---eCcEEEeecCCCCCCCCC
Confidence               23459999999983221  566543 1344  224777889999   888899999999987763

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=91.11  E-value=0.25  Score=29.34  Aligned_cols=23  Identities=22%  Similarity=0.717  Sum_probs=19.3

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|..+++|+..  ..+|.|.+||+|
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~G   29 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYTG   29 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCcC
Confidence            47789999976  458999999997

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF04706 Dickkopf_N: Dickkopf N-terminal cysteine-rich region; InterPro: IPR006796 Dickkopf proteins are a class of Wnt antagonists

Probab=91.03  E-value=0.41  Score=31.82  Aligned_cols=21  Identities=24%  Similarity=0.702  Sum_probs=18.1

Q ss_pred             cccccCCCCCCCCcccCCccc
Q psy9427         295 LGCRQNEECSGQMICAGSKCT  315 (324)
Q Consensus       295 ~~C~~~~~C~~~~~C~~~~C~  315 (324)
                      ..|+.+++|-.++.|++|+|+
T Consensus        31 ~rC~Rd~~CC~g~~CvnG~C~   51 (52)
T PF04706_consen   31 KRCTRDAMCCPGNLCVNGVCT   51 (52)
T ss_pred             CCCCCCcccCCCCeeeCCEec
Confidence            468899999999999999886

They possess two conserved cysteine-rich regions. This family represents the N-terminal conserved region []. The C-terminal region has been found to share significant sequence similarity to the colipase fold (IPR001981 from INTERPRO) [].; GO: 0007275 multicellular organismal development, 0030178 negative regulation of Wnt receptor signaling pathway, 0005576 extracellular region

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=91.02  E-value=0.22  Score=30.47  Aligned_cols=30  Identities=30%  Similarity=0.604  Sum_probs=20.9

Q ss_pred             CCCCCCCCCCEeeeCC-CceeeeeCCCeeecC
Q psy9427          17 CDGVSCGVNAVCVVNN-HEARCFCPPGSYVGD   47 (324)
Q Consensus        17 C~~~~C~~~~~C~~~~-~~~~C~C~~G~y~g~   47 (324)
                      |...+|..||.|++.. |++.|.|..| |..+
T Consensus         2 C~~~~cP~NA~C~~~~dG~eecrCllg-yk~~   32 (37)
T PF12946_consen    2 CIDTKCPANAGCFRYDDGSEECRCLLG-YKKV   32 (37)
T ss_dssp             -SSS---TTEEEEEETTSEEEEEE-TT-EEEE
T ss_pred             ccCccCCCCcccEEcCCCCEEEEeeCC-cccc
Confidence            4556789999999765 9999999999 8763

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=90.20  E-value=0.27  Score=22.93  Aligned_cols=11  Identities=55%  Similarity=1.573  Sum_probs=8.6

Q ss_pred             eeeeCCCeeecC
Q psy9427          36 RCFCPPGSYVGD   47 (324)
Q Consensus        36 ~C~C~~G~y~g~   47 (324)
                      .|+|++| |+|.
T Consensus         1 ~C~C~~G-~~G~   11 (13)
T PF12661_consen    1 TCQCPPG-WTGP   11 (13)
T ss_dssp             EEEE-TT-EETT
T ss_pred             CccCcCC-CcCC
Confidence            4899999 9985

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=89.25  E-value=0.17  Score=30.97  Aligned_cols=30  Identities=27%  Similarity=0.483  Sum_probs=21.1

Q ss_pred             CCCCCCCCCEEeeCC-CCcEeeCCCCCcCCC
Q psy9427          81 DSGACGTNAVCIPED-HRPVCHCPVGTHPSP  110 (324)
Q Consensus        81 ~~~~C~~~~~C~~~~-~~~~C~C~~G~~g~~  110 (324)
                      ....|..+|.|++.. |++.|+|..||...+
T Consensus         3 ~~~~cP~NA~C~~~~dG~eecrCllgyk~~~   33 (37)
T PF12946_consen    3 IDTKCPANAGCFRYDDGSEECRCLLGYKKVG   33 (37)
T ss_dssp             SSS---TTEEEEEETTSEEEEEE-TTEEEET
T ss_pred             cCccCCCCcccEEcCCCCEEEEeeCCccccC
Confidence            335677889999766 999999999998644

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>KOG0994|consensus

Probab=88.60  E-value=2  Score=45.77  Aligned_cols=75  Identities=24%  Similarity=0.556  Sum_probs=40.7

Q ss_pred             CCceeeeeCCCeeecCCCCCCcccCCCC---CCcCCCCCceeCCCCcccCCCCCCCCC-CCCE---EeeCCCCcEe-eCC
Q psy9427          32 NHEARCFCPPGSYVGDPNIECRQVPCVH---NHDCSTSHACDLLSHTCIPACDSGACG-TNAV---CIPEDHRPVC-HCP  103 (324)
Q Consensus        32 ~~~~~C~C~~G~y~g~~~~~C~~~~C~~---~~~C~~~~~C~c~~~~Ci~~C~~~~C~-~~~~---C~~~~~~~~C-~C~  103 (324)
                      .....|+|.+| |+|.....|.++--.+   +++|.   .|.|.++  ||.-.+..|. ..+.   |+....+.+| .|+
T Consensus       931 t~~ivC~C~~G-Y~G~RCe~CA~~~fGnP~~GGtCq---~CeC~~N--iD~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck 1004 (1758)
T KOG0994|consen  931 TQQIVCHCQEG-YSGSRCEICADNHFGNPSEGGTCQ---KCECSNN--IDLYDPGACDVATGACLKCLYHTEGDHCEHCK 1004 (1758)
T ss_pred             ccceeeecccC-ccccchhhhcccccCCcccCCccc---cccccCC--cCccCCCccchhhchhhhhhhcccccchhhcc
Confidence            34568999999 9998777776631111   33321   0111000  5555555553 1233   4433334455 699


Q ss_pred             CCCcCCCCC
Q psy9427         104 VGTHPSPSP  112 (324)
Q Consensus       104 ~G~~g~~~~  112 (324)
                      .||.|+...
T Consensus      1005 ~Gf~GdA~~ 1013 (1758)
T KOG0994|consen 1005 DGFYGDALR 1013 (1758)
T ss_pred             ccchhHHHH
Confidence            999997653

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=88.27  E-value=0.44  Score=41.78  Aligned_cols=36  Identities=25%  Similarity=0.637  Sum_probs=27.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         161 GCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       161 ~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|.+.++|....++                   |.  ..|.++.|+|.|.|++||+.
T Consensus       183 ~C~~~~~C~~~~~~-------------------c~--~~C~~~~g~~~c~c~~g~~~  218 (224)
T cd01475         183 ICVVPDLCATLSHV-------------------CQ--QVCISTPGSYLCACTEGYAL  218 (224)
T ss_pred             cCcCchhhcCCCCC-------------------cc--ceEEcCCCCEEeECCCCccC
Confidence            47777778554433                   43  46999999999999999985

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=85.13  E-value=1.2  Score=39.07  Aligned_cols=38  Identities=26%  Similarity=0.523  Sum_probs=29.8

Q ss_pred             CcccccCCCCCCCC-CCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         114 VHCARESNLCRDSN-PCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       114 ~~C~~~~~~C~~~~-~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      ..|.+. ++|...+ .|  ...|.+   +.|+|.|.|++||++..
T Consensus       182 ~~C~~~-~~C~~~~~~c--~~~C~~---~~g~~~c~c~~g~~~~~  220 (224)
T cd01475         182 KICVVP-DLCATLSHVC--QQVCIS---TPGSYLCACTEGYALLE  220 (224)
T ss_pred             ccCcCc-hhhcCCCCCc--cceEEc---CCCCEEeECCCCccCCC
Confidence            678776 8884332 45  468999   99999999999998765

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF04706 Dickkopf_N: Dickkopf N-terminal cysteine-rich region; InterPro: IPR006796 Dickkopf proteins are a class of Wnt antagonists

Probab=84.85  E-value=1.4  Score=29.33  Aligned_cols=15  Identities=27%  Similarity=0.738  Sum_probs=6.7

Q ss_pred             CCCCCccCCCCCcCCC
Q psy9427         233 CAGDQECLAGEEKCIG  248 (324)
Q Consensus       233 C~~~~~C~~~~~~C~~  248 (324)
                      |..+.+|. .+..|+.
T Consensus         2 C~~D~dC~-~g~yC~~   16 (52)
T PF04706_consen    2 CSSDEDCG-YGKYCHS   16 (52)
T ss_pred             CcccccCC-CCCCcCC
Confidence            44445554 3444443

They possess two conserved cysteine-rich regions. This family represents the N-terminal conserved region []. The C-terminal region has been found to share significant sequence similarity to the colipase fold (IPR001981 from INTERPRO) [].; GO: 0007275 multicellular organismal development, 0030178 negative regulation of Wnt receptor signaling pathway, 0005576 extracellular region

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	324
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.87
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.8
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.78
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.73
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.72
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.7
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.69
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.66
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.66
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.66
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.61
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.61
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.56
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.5
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.49
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.45
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.41
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.4
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.38
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.33
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.3
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.3
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.28
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.25
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.22
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.2
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.19
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.19
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	99.17
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.16
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.16
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	99.14
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.13
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.12
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.07
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.07
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.07
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.06
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.01
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.0
2vh0_B	134	Activated factor XA light chain; serine protease,	98.99
2vh0_B	134	Activated factor XA light chain; serine protease,	98.96
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.95
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.92
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.87
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.83
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.82
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.77
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.76
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.62
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.58
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.56
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.55
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.51
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.44
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.44
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.3
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	98.26
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.11
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.1
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.03
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.91
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.9
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.89
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.82
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.8
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.74
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.73
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.6
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.57
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.54
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.48
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.45
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.42
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.32
1ob1_C	99	Major merozoite surface protein; immune system, im	97.29
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.27
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.25
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.22
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	97.21
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.17
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.12
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.11
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.07
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.03
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.98
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.95
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.91
1ob1_C	99	Major merozoite surface protein; immune system, im	96.9
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.9
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.84
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.84
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.81
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.77
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.62
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.61
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.53
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.52
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.51
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.37
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.26
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.26
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.21
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.08
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.0
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.98
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.87
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	95.21
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.91
2wph_E	59	Coagulation factor IXA light chain; serine proteas	94.84
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.75
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	94.67
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	94.63
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	94.61
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	94.34
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	94.1
1szb_A	170	Mannose binding lectin-associated serine protease-	94.05
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	93.99
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	93.64
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	93.46
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	92.36
1szb_A	170	Mannose binding lectin-associated serine protease-	91.17
1nzi_A	159	Complement C1S component; calcium, innate immunity	90.96
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	90.76
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	89.1
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	88.59
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	88.32
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	88.0
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	87.6
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	87.08
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	86.71
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	86.62
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	86.09
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	85.72
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	85.66
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	85.27
1nzi_A	159	Complement C1S component; calcium, innate immunity	85.17
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	84.91
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	84.9
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	84.37
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	83.85
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	82.92
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	82.69
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	82.32

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.87  E-value=4.4e-23  Score=175.90  Aligned_cols=147  Identities=24%  Similarity=0.519  Sum_probs=122.1

Q ss_pred             CCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC----CCCCCCCCEEe
Q psy9427          17 CDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD----SGACGTNAVCI   92 (324)
Q Consensus        17 C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~----~~~C~~~~~C~   92 (324)
                      ...+||.+ ++|+++.++|+|.|++| |+|.+...|.+                      |++|.    ..+|.++++|+
T Consensus         8 ~~~~pC~n-g~C~~~~g~~~C~C~~G-~~g~~~~~C~~----------------------id~C~~~~~~~~C~~~~~C~   63 (186)
T 1z1y_A            8 TVDTICXN-GQLVQMSNHFXCMCNEG-LVHLSENTCEE----------------------XNECXXETLGXACGEFGQCI   63 (186)
T ss_dssp             CTTCCCBT-EEEEECSSCEEEEECTT-EEEEETTEEEE----------------------CCCCSGGGTTSEEETTEEEE
T ss_pred             CCCCCCCC-CEeECCCCCeEeECCCC-CccCCCCccCC----------------------CCcccCCCCCCCCCCCCEee
Confidence            45678984 59999999999999999 98865456766                      78887    67899999999


Q ss_pred             eCC-----CCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeee----cCCCCCCCeeeeCCCCCccCC-CCCCC
Q psy9427          93 PED-----HRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCE----DTGATNGKVVCSCPELSVGDP-YKTGC  162 (324)
Q Consensus        93 ~~~-----~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~----~~~~~~g~~~C~C~~G~~g~~-~~~~C  162 (324)
                      ++.     ++|+|.|++||+|+.   ..|+ + ++| ..++|.++++|+    +   +.++|+|+|++||+|.. ....|
T Consensus        64 ~~~~~~~~g~y~C~C~~G~~g~~---~~C~-~-d~C-~~~~C~~~g~C~~~~~~---~~g~~~C~C~~Gy~g~~~~~~~C  134 (186)
T 1z1y_A           64 ENPDPAQVNMYXCGCIEGYTLXE---DTCV-L-DVC-QYXNCGESGECIVEYLS---EIQSAGCSCAIGXVPNPEDEXXC  134 (186)
T ss_dssp             ECSSTTSSCSEEEEECTTEEEET---TEEE-E-GGG-TTCCCCTTEEEEEEEET---TEEEEEEEECTEEEEETTTTTEE
T ss_pred             cCCCCcCCCCEECCCCCCCccCC---CCCC-C-CcC-cCCCCCCCCEEeeCCcC---CCCCceEECCCCCcccCCCCCcc
Confidence            998     899999999999954   4666 5 899 778999999999    8   88999999999999943 12457


Q ss_pred             CCC--CCCCCCCCCCCCCCcccCCcccCCCccCC-CCCCeeeeCCCCceeeCCCCCccC
Q psy9427         163 VPQ--GQCPRGDADCPPSSRCSGGQCVSVCQGAC-GPNALCRAVGKRPVCACPDGFSAV  218 (324)
Q Consensus       163 ~~~--~eC~~~~~~C~~~~~C~~~~C~d~C~~~C-~~~~~C~~~~g~y~C~C~~Gy~g~  218 (324)
                      +++  ++|.                      .+| .++++|+++.++|+|.|++||+|.
T Consensus       135 ~~~~~~~C~----------------------~~C~~~~~~C~n~~g~y~C~C~~G~~g~  171 (186)
T 1z1y_A          135 TXTGETACQ----------------------LXCNTDNEVCXNVEGVYXCQCMEGFTFD  171 (186)
T ss_dssp             EEEECCCCC----------------------CCCCTTTEEEEEETTEEEEEECTTCEEE
T ss_pred             eEcCCCccc----------------------ccccccCcceecCCCCeeeECCCCCccC
Confidence            654  5662                      247 788999999999999999999983

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.80  E-value=4.1e-19  Score=143.40  Aligned_cols=122  Identities=26%  Similarity=0.623  Sum_probs=101.1

Q ss_pred             cccCCC--CCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCc-ccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427          13 CWNSCD--GVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECR-QVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA   89 (324)
Q Consensus        13 c~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~-~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~   89 (324)
                      .+|+|.  .+||.++|+|++..++|+|+|++| |+|.   .|. +                      +++|...+|.+++
T Consensus         4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~G-y~G~---~C~~~----------------------~~~C~~~~C~~~~   57 (135)
T 2vj3_A            4 DVDECSLGANPCEHAGKCINTLGSFECQCLQG-YTGP---RCEID----------------------VNECVSNPCQNDA   57 (135)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTT-EEST---TSCEE----------------------CCTTTTCCCCSSC
T ss_pred             ccccccCCCCCCCCCCEeECCCCCEEEECCCC-CcCC---ccccc----------------------CccCCCCCCCCCC
Confidence            467897  579999999999999999999999 9885   343 3                      7888888999999


Q ss_pred             EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC-CCCCC
Q psy9427          90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV-PQGQC  168 (324)
Q Consensus        90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~-~~~eC  168 (324)
                      +|++..++|.|.|++||+|     ..|+..+++| ..++|..+++|++   +.++|+|+|++||+|..    |. ++++|
T Consensus        58 ~C~~~~g~~~C~C~~G~~G-----~~C~~~~~~C-~~~~C~~~g~C~~---~~g~~~C~C~~G~~G~~----C~~~i~~C  124 (135)
T 2vj3_A           58 TCLDQIGEFQCICMPGYEG-----VHCEVNTDEC-ASSPCLHNGRCLD---KINEFQCECPTGFTGHL----CQVDLHHI  124 (135)
T ss_dssp             EEEECSSCEEEECCTTEES-----SSSCEECCTT-TTCCSTTTCEEEE---CSSCEEEECCTTEESSS----SCEECC--
T ss_pred             EEeCCCCCceeeCCCCCcC-----CcceecCCcc-cCCCcCCCCEeEC---CCCCeEEECCCCCcCCc----cCccCccc
Confidence            9999999999999999998     7887434999 7789999999999   99999999999999876    64 78888


Q ss_pred             CCCCC
Q psy9427         169 PRGDA  173 (324)
Q Consensus       169 ~~~~~  173 (324)
                      .....
T Consensus       125 ~~~~~  129 (135)
T 2vj3_A          125 LDAQK  129 (135)
T ss_dssp             -----
T ss_pred             cCCCc
Confidence            55443

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.78  E-value=1.7e-18  Score=139.83  Aligned_cols=119  Identities=27%  Similarity=0.581  Sum_probs=96.7

Q ss_pred             cCCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          77 IPACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        77 i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      ||+|.  .++|.++++|+++.++|+|.|++||+|     ..|+..+++| ..++|..+++|++   +.++|+|+|++||+
T Consensus         5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G-----~~C~~~~~~C-~~~~C~~~~~C~~---~~g~~~C~C~~G~~   75 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTG-----PRCEIDVNEC-VSNPCQNDATCLD---QIGEFQCICMPGYE   75 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES-----TTSCEECCTT-TTCCCCSSCEEEE---CSSCEEEECCTTEE
T ss_pred             cccccCCCCCCCCCCEeECCCCCEEEECCCCCcC-----CcccccCccC-CCCCCCCCCEEeC---CCCCceeeCCCCCc
Confidence            78897  579999999999999999999999999     7886433999 7789999999999   99999999999999


Q ss_pred             cCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCC
Q psy9427         155 GDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSAC  233 (324)
Q Consensus       155 g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C  233 (324)
                      |..    |. ++++|..  .                   +|.++++|+++.++|+|.|++||+|      ..|+..+++|
T Consensus        76 G~~----C~~~~~~C~~--~-------------------~C~~~g~C~~~~g~~~C~C~~G~~G------~~C~~~i~~C  124 (135)
T 2vj3_A           76 GVH----CEVNTDECAS--S-------------------PCLHNGRCLDKINEFQCECPTGFTG------HLCQVDLHHI  124 (135)
T ss_dssp             SSS----SCEECCTTTT--C-------------------CSTTTCEEEECSSCEEEECCTTEES------SSSCEECC--
T ss_pred             CCc----ceecCCcccC--C-------------------CcCCCCEeECCCCCeEEECCCCCcC------CccCccCccc
Confidence            875    54 5677732  1                   5788999999999999999999997      3464325555


Q ss_pred             CC
Q psy9427         234 AG  235 (324)
Q Consensus       234 ~~  235 (324)
                      ..
T Consensus       125 ~~  126 (135)
T 2vj3_A          125 LD  126 (135)
T ss_dssp             --
T ss_pred             cC
Confidence            43

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.73  E-value=7.9e-18  Score=137.01  Aligned_cols=120  Identities=25%  Similarity=0.623  Sum_probs=93.6

Q ss_pred             cCCCCCCCCCCCEeeeCC--CceeeeeCCCeeecCCCCCCccc-CCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEE
Q psy9427          15 NSCDGVSCGVNAVCVVNN--HEARCFCPPGSYVGDPNIECRQV-PCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVC   91 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~--~~~~C~C~~G~y~g~~~~~C~~~-~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C   91 (324)
                      |+|..+||.++++|++..  ++|+|.|++| |+|..   |... ++..     ....|..     +++|...+|.++++|
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G-~~G~~---C~~~~~~~~-----~~~~c~~-----~~~C~~~~C~~~g~C   66 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDG-FTDPN---CSSVVEVAS-----DEEEPTS-----AGPCTPNPCHNGGTC   66 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTT-CCTTT---TCSCCCCTT-----TTTSCCC-----CCTTSSCCCCTTCEE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCC-CCCCC---CccCccccc-----ccccccc-----CCcCCCCCCCCCCEe
Confidence            578899999999999865  6899999999 98853   3221 1111     0111111     688988999999999


Q ss_pred             e-------eCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427          92 I-------PEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus        92 ~-------~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                      +       ++.++|+|.|++||+|     ..|+ ++ ++| ..++|..+++|++   +.++|+|+|++||+|+..
T Consensus        67 ~~~~~~~~~~~~~~~C~C~~G~~G-----~~C~~~i-~~C-~~~~C~~~~~C~~---~~g~~~C~C~~G~~G~~c  131 (143)
T 4d90_A           67 EISEAYRGDTFIGYVCKCPRGFNG-----IHCQHNI-NEC-EVEPCKNGGICTD---LVANYSCECPGEFMGRNC  131 (143)
T ss_dssp             EECCCEETTEECCEEEECCTTEES-----TTSCEEC-CTT-TTCCSCTTCEEEE---ETTEEEEECCTTCBSTTS
T ss_pred             cCCCccccCCCCCeEeECcCCCcC-----CCcccCC-CcC-CCCCCCCCCEeEC---CCCCeEeECCCCCccCCc
Confidence            9       6668999999999998     8898 66 999 7889999999999   999999999999999874

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.72  E-value=8.9e-18  Score=136.82  Aligned_cols=119  Identities=22%  Similarity=0.501  Sum_probs=98.3

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecCC------CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC---CCCCCCE
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGDP------NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG---ACGTNAV   90 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~------~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~---~C~~~~~   90 (324)
                      ++|.++|+|++.   |+|.|++| |+|..      ...|.+                      |++|...   +|.++++
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G-~~g~~~~~~~~~~~C~d----------------------ideC~~~~~~~C~~~~~   60 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPG-FSSFSEIITTPMETCDD----------------------INECATLSKVSCGKFSD   60 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTT-EECSSSSBCSTTCCCEE----------------------CCGGGC----CCCTTEE
T ss_pred             CcCCCCCEEcCC---CEEeCCCC-CcCccccccCCCCcCCc----------------------cccccCCCCCCCCCCCE
Confidence            478899999874   89999999 99852      234555                      8888764   8998999


Q ss_pred             EeeCCCCcEeeCCCCCcCCCCC-------CCcccccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCC
Q psy9427          91 CIPEDHRPVCHCPVGTHPSPSP-------DVHCARESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGC  162 (324)
Q Consensus        91 C~~~~~~~~C~C~~G~~g~~~~-------~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C  162 (324)
                      |+++.++|.|.|++||+|....       ...|+++ +||+. .++|..+++|++   +.++|+|+|++||+|......|
T Consensus        61 C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~di-deC~~~~~~C~~~~~C~n---~~g~y~C~C~~Gy~g~~~~~~C  136 (143)
T 2bou_A           61 CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDV-DECSSGQHQCDSSTVCFN---TVGSYSCRCRPGWKPRHGIPNN  136 (143)
T ss_dssp             EEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEEC-CHHHHTCCCCCTTSEEEE---CSSCEEEECCSSSCBCTTCCSS
T ss_pred             EEcCCCCeEeECCCCcccCcCccccccCCCCCcCCc-cCccCcCCCCCCCCEEEC---CCCCEEeeCCCCcccCCCCccC
Confidence            9999999999999999986321       1478888 99943 468999999999   9999999999999999877778


Q ss_pred             CCCCCC
Q psy9427         163 VPQGQC  168 (324)
Q Consensus       163 ~~~~eC  168 (324)
                      +++++|
T Consensus       137 ~~~~~C  142 (143)
T 2bou_A          137 QKDTVC  142 (143)
T ss_dssp             BTTCCB
T ss_pred             ccCCcc
Confidence            887766

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.70  E-value=1.9e-17  Score=134.93  Aligned_cols=118  Identities=19%  Similarity=0.453  Sum_probs=90.2

Q ss_pred             CCCCCCCEEeeCCCCcEeeCCCCCcCCC----CCCCcccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427          83 GACGTNAVCIPEDHRPVCHCPVGTHPSP----SPDVHCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGD  156 (324)
Q Consensus        83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~----~~~~~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~  156 (324)
                      .+|.++++|++.   |.|.|++||+|+.    .....|+++ ++|+..  .+|..+++|++   +.++|+|+|++||+|.
T Consensus         7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~di-deC~~~~~~~C~~~~~C~n---~~g~y~C~C~~Gy~g~   79 (143)
T 2bou_A            7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDI-NECATLSKVSCGKFSDCWN---TEGSYDCVCSPGYEPV   79 (143)
T ss_dssp             TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEEC-CGGGC----CCCTTEEEEE---CSSCEEEEECTTEEET
T ss_pred             CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCcc-ccccCCCCCCCCCCCEEEc---CCCCeEeECCCCcccC
Confidence            578888999874   8999999999852    112689888 999443  28998999999   9999999999999998


Q ss_pred             CCC--------CCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccc
Q psy9427         157 PYK--------TGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFR  228 (324)
Q Consensus       157 ~~~--------~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~  228 (324)
                      ...        ..|++++||....+                   +|.++++|+++.|+|+|.|++||+|.  .....|++
T Consensus        80 ~~~~~~~~~~~~~C~dideC~~~~~-------------------~C~~~~~C~n~~g~y~C~C~~Gy~g~--~~~~~C~~  138 (143)
T 2bou_A           80 SGAKTFKNESENTCQDVDECSSGQH-------------------QCDSSTVCFNTVGSYSCRCRPGWKPR--HGIPNNQK  138 (143)
T ss_dssp             TCCSCBSSGGGCCEEECCHHHHTCC-------------------CCCTTSEEEECSSCEEEECCSSSCBC--TTCCSSBT
T ss_pred             cCccccccCCCCCcCCccCccCcCC-------------------CCCCCCEEECCCCCEEeeCCCCcccC--CCCccCcc
Confidence            542        24666666633222                   58889999999999999999999983  22344544

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.69  E-value=6.1e-17  Score=131.74  Aligned_cols=107  Identities=30%  Similarity=0.722  Sum_probs=85.9

Q ss_pred             CCCCCCCCCCCCEEeeCC--CCcEeeCCCCCcCCCCCCCccccc------------CCCCCCCCCCCCCCeee-------
Q psy9427          78 PACDSGACGTNAVCIPED--HRPVCHCPVGTHPSPSPDVHCARE------------SNLCRDSNPCHPTARCE-------  136 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~~~~C~~~------------~~~C~~~~~C~~~~~C~-------  136 (324)
                      |+|.++||.++++|++..  ++|.|.|++||+|     ..|+.+            +++| ..++|.++++|+       
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G-----~~C~~~~~~~~~~~~c~~~~~C-~~~~C~~~g~C~~~~~~~~   74 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTD-----PNCSSVVEVASDEEEPTSAGPC-TPNPCHNGGTCEISEAYRG   74 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCT-----TTTCSCCCCTTTTTSCCCCCTT-SSCCCCTTCEEEECCCEET
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCC-----CCCccCccccccccccccCCcC-CCCCCCCCCEecCCCcccc
Confidence            567788999999999865  6899999999998     555431            2678 677899999999       


Q ss_pred             cCCCCCCCeeeeCCCCCccCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCC
Q psy9427         137 DTGATNGKVVCSCPELSVGDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGF  215 (324)
Q Consensus       137 ~~~~~~g~~~C~C~~G~~g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy  215 (324)
                      +   +.++|+|+|++||+|..    |. ++++|..  .                   +|.++++|+++.++|+|.|++||
T Consensus        75 ~---~~~~~~C~C~~G~~G~~----C~~~i~~C~~--~-------------------~C~~~~~C~~~~g~~~C~C~~G~  126 (143)
T 4d90_A           75 D---TFIGYVCKCPRGFNGIH----CQHNINECEV--E-------------------PCKNGGICTDLVANYSCECPGEF  126 (143)
T ss_dssp             T---EECCEEEECCTTEESTT----SCEECCTTTT--C-------------------CSCTTCEEEEETTEEEEECCTTC
T ss_pred             C---CCCCeEeECcCCCcCCC----cccCCCcCCC--C-------------------CCCCCCEeECCCCCeEeECCCCC
Confidence            6   67899999999998765    76 7888832  1                   47889999999999999999999


Q ss_pred             ccC
Q psy9427         216 SAV  218 (324)
Q Consensus       216 ~g~  218 (324)
                      +|.
T Consensus       127 ~G~  129 (143)
T 4d90_A          127 MGR  129 (143)
T ss_dssp             BST
T ss_pred             ccC
Confidence            983

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.66  E-value=2.7e-16  Score=155.25  Aligned_cols=132  Identities=27%  Similarity=0.567  Sum_probs=104.8

Q ss_pred             cCCCCCCCCCCCCEEeeCCC-CcEe-eCCCCCcCCCCCCCcccccCCCCCCCCC--CCCCC---eeecCCCCCCCeeee-
Q psy9427          77 IPACDSGACGTNAVCIPEDH-RPVC-HCPVGTHPSPSPDVHCARESNLCRDSNP--CHPTA---RCEDTGATNGKVVCS-  148 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~-~~~C-~C~~G~~g~~~~~~~C~~~~~~C~~~~~--C~~~~---~C~~~~~~~g~~~C~-  148 (324)
                      |++|..+||.++++|+++.+ +|+| .|++||+|++   ..|+++ +|| ..++  |.+++   +|++   +.++|+|. 
T Consensus         3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg---~~CeDi-DEC-~~~p~~C~~gg~~~~CvN---t~gsY~C~~   74 (634)
T 1yo8_A            3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG---THCEDL-DEC-ALVPDICFSTSKVPRCVN---TQPGFHCLP   74 (634)
T ss_dssp             -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCS---SSCCBC-CTT-TTSCCCSCCCSSSCCEEE---CSSSEEECC
T ss_pred             ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCC---CCcccc-ccc-cCCCCcccCCccccceee---ccCceeccc
Confidence            78898899999999999885 4999 9999999876   789988 999 6566  99888   9999   99999998 


Q ss_pred             CCCCCccCCCC-----------CCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCC----CCceeeCCC
Q psy9427         149 CPELSVGDPYK-----------TGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVG----KRPVCACPD  213 (324)
Q Consensus       149 C~~G~~g~~~~-----------~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~----g~y~C~C~~  213 (324)
                      |++||+|..+.           ..|++++||....+                   +|+++++|+++.    ++|+|.|++
T Consensus        75 C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~-------------------pC~~~~~Cvnt~~~~~GsY~C~C~~  135 (634)
T 1yo8_A           75 CPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH-------------------NCHKHAECIYLGHFSDPMYKCECQT  135 (634)
T ss_dssp             CCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCC-------------------CCCTTEEEEECCTTCSSSEEEEECT
T ss_pred             CCCCcccCccccccccccccCCCcccccccccCCCc-------------------ccccCccccccccccccceeeeccC
Confidence            99999998742           24777777743322                   588899999998    999999999


Q ss_pred             CCccCCCCCCCCcc---ccCCCCCC-CCccC
Q psy9427         214 GFSAVGGEARVGCF---REMSACAG-DQECL  240 (324)
Q Consensus       214 Gy~g~~~~~~~~C~---~~~~~C~~-~~~C~  240 (324)
                      ||+|.    ...|+   + +++|.. ...|.
T Consensus       136 Gy~Gd----G~~Ce~d~D-iDeC~~~~~~C~  161 (634)
T 1yo8_A          136 GYAGD----GLICGEDSD-LDGWPNLNLVCA  161 (634)
T ss_dssp             TEEES----SSSEEECTT-SSSSCSSCCTTT
T ss_pred             Ccccc----CcccccccC-cccccCCCCccc
Confidence            99972    12465   3 566643 34553

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.66  E-value=4.2e-18  Score=141.72  Aligned_cols=139  Identities=21%  Similarity=0.448  Sum_probs=98.2

Q ss_pred             cccCCC-CCCCCCCCEeeeCCCceeeeeCCCeeecCC-CCCCcccCCCCCCcCCCCCceeCCCCcccCC--CCC--CCC-
Q psy9427          13 CWNSCD-GVSCGVNAVCVVNNHEARCFCPPGSYVGDP-NIECRQVPCVHNHDCSTSHACDLLSHTCIPA--CDS--GAC-   85 (324)
Q Consensus        13 c~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~-~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~--C~~--~~C-   85 (324)
                      .+|+|+ .+||. +++|+++.++|+|+|++| |++++ ...|.+                      +++  |..  .+| 
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~G-y~~~~~g~~C~d----------------------~~~~~C~~~~~~c~   57 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPD-FELNPTRVGCVD----------------------TRSGNCYLDIRPRG   57 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTT-CEECTTSSBEEC----------------------CCCEEEEEEC----
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCC-CeECCCCCcccC----------------------CCCCcccCCCcccC
Confidence            367787 48997 789999999999999999 88643 335554                      343  532  223 


Q ss_pred             -CCCCEEeeCCC----CcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCC--CCccCCC
Q psy9427          86 -GTNAVCIPEDH----RPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPE--LSVGDPY  158 (324)
Q Consensus        86 -~~~~~C~~~~~----~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~--G~~g~~~  158 (324)
                       ..+++|+++.+    +|.|.|++||.+.    ..|+                .|.+.  ..++|+|.|++  ||+++..
T Consensus        58 ~~~~~~C~~~~~~~~~~~~C~C~~G~~~~----~~C~----------------~C~~~--~~~~y~C~C~~g~G~~~~~~  115 (162)
T 1uzk_A           58 DNGDTACSNEIGVGVSKASCCCSLGKAWG----TPCE----------------MCPAV--NTSEYKILCPGGEGFRPNPI  115 (162)
T ss_dssp             ------CEEEEEEEECHHHHHTTTCCEET----TTTE----------------ECCCT--TSHHHHHHCTTCTTEEECTT
T ss_pred             CCCCCcccCCcCCcccCceeeCCCCCCcC----CCcc----------------cCCCC--CCCCceeECCCCCCcccCCC
Confidence             24678998877    8999999999841    2232                13221  56789999998  9999875


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         159 KTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       159 ~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      ...|++++||+...+                   +|.+ ++|+++.|+|+|.|++||+|
T Consensus       116 ~~~c~dideC~~~~~-------------------~C~~-g~C~n~~gsy~C~C~~Gy~g  154 (162)
T 1uzk_A          116 TVILEDIDECQELPG-------------------LCQG-GKCINTFGSFQCRCPTGYYL  154 (162)
T ss_dssp             TCCEEECCHHHHCGG-------------------GGBT-SEEEECSSCEEEECCTTCCB
T ss_pred             CCccCccccccCCCC-------------------CcCC-CEeEcCCCCEEeeCCCCccC
Confidence            556888888844322                   4654 79999999999999999997

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.66  E-value=3.2e-16  Score=154.75  Aligned_cols=133  Identities=25%  Similarity=0.547  Sum_probs=107.7

Q ss_pred             ccCCCCCCCCCCCEeeeCCC-ceee-eeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCC--CCCCC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNH-EARC-FCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGA--CGTNA   89 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~-~~~C-~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~--C~~~~   89 (324)
                      +++|..+||.++++|+++.+ +|+| .|++| |+|+.. .|++                      |++|...+  |.+++
T Consensus         3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~G-ytGdg~-~CeD----------------------iDEC~~~p~~C~~gg   58 (634)
T 1yo8_A            3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVG-FLGNGT-HCED----------------------LDECALVPDICFSTS   58 (634)
T ss_dssp             -CGGGGCCSCTTCCEEECTTSCEEECCCCTT-BCSCSS-SCCB----------------------CCTTTTSCCCSCCCS
T ss_pred             ccccCCCCCCCCCEEecCCCCCeECCcCCCc-cCCCCC-Cccc----------------------cccccCCCCcccCCc
Confidence            57788899999999999875 5999 99999 887532 4665                      88998777  99988


Q ss_pred             ---EEeeCCCCcEee-CCCCCcCCCC----------CCCcccccCCCCCC-CCCCCCCCeeecCCCCC----CCeeeeCC
Q psy9427          90 ---VCIPEDHRPVCH-CPVGTHPSPS----------PDVHCARESNLCRD-SNPCHPTARCEDTGATN----GKVVCSCP  150 (324)
Q Consensus        90 ---~C~~~~~~~~C~-C~~G~~g~~~----------~~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~----g~~~C~C~  150 (324)
                         +|+++.++|+|. |++||+|...          ....|+++ ++|+. .++|+.+++|++   +.    ++|+|+|+
T Consensus        59 ~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di-deC~~~~~pC~~~~~Cvn---t~~~~~GsY~C~C~  134 (634)
T 1yo8_A           59 KVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE-NPCKDKTHNCHKHAECIY---LGHFSDPMYKCECQ  134 (634)
T ss_dssp             SSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEEC-CTTTTTCCCCCTTEEEEE---CCTTCSSSEEEEEC
T ss_pred             cccceeeccCceecccCCCCcccCccccccccccccCCCccccc-ccccCCCcccccCccccc---cccccccceeeecc
Confidence               999999999998 9999998652          11458888 99944 358999999999   88    99999999


Q ss_pred             CCCccCCCCCCCC---CCCCCCCCCCCCC
Q psy9427         151 ELSVGDPYKTGCV---PQGQCPRGDADCP  176 (324)
Q Consensus       151 ~G~~g~~~~~~C~---~~~eC~~~~~~C~  176 (324)
                      +||+|++  ..|.   +++||......|.
T Consensus       135 ~Gy~GdG--~~Ce~d~DiDeC~~~~~~C~  161 (634)
T 1yo8_A          135 TGYAGDG--LICGEDSDLDGWPNLNLVCA  161 (634)
T ss_dssp             TTEEESS--SSEEECTTSSSSCSSCCTTT
T ss_pred             CCccccC--cccccccCcccccCCCCccc
Confidence            9999976  3475   8888865555443

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.61  E-value=8.9e-20  Score=161.30  Aligned_cols=179  Identities=10%  Similarity=-0.049  Sum_probs=131.5

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecCCCC----C------CcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNI----E------CRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA   89 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~----~------C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~   89 (324)
                      .+|.++++|++..++|+|.|++| |+|....    +      |...||+++++|.....|..     +++|.+.||.+++
T Consensus        38 ~~c~ngG~C~~g~~~y~C~Cp~G-f~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~-----~~eC~s~pC~ngG  111 (267)
T 4fbr_A           38 IKSDDGGKTLKGTMTYNGEGPIG-FRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQ-----NIVAVSIKSNDGG  111 (267)
T ss_dssp             EECSSTTSEEEEEEEETTSCCEE-EEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSC-----CEEEEEEECSSTT
T ss_pred             CCcCCCCeecCCCCCeEEeCCCC-cccccccccccccccccCcCCCcccCCCeeeccCcccc-----ccccCCCCCCCCC
Confidence            47899999999999999999999 9986432    3      66668888777755554443     6688889999999


Q ss_pred             EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCC----------------------------CCCCCCCCCeeecCCCC
Q psy9427          90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCR----------------------------DSNPCHPTARCEDTGAT  141 (324)
Q Consensus        90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~----------------------------~~~~C~~~~~C~~~~~~  141 (324)
                      +|++...+|.|.|++||+|     ..|+..+++|+                            ...+|.++++|++   .
T Consensus       112 ~C~~~~~sy~C~C~~Gf~G-----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~d---g  183 (267)
T 4fbr_A          112 KTLTGTTTYNGEGPIGFKS-----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLS---G  183 (267)
T ss_dssp             SEEEEEEEETTSCCEEEEE-----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEE---E
T ss_pred             EEecCCccEEeeCCCCccc-----cCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeC---C
Confidence            9999999999999999998     55543323310                            1235778889988   8


Q ss_pred             CCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccC----------CcccCCCccCCCCCCeeeeCCCCceeeC
Q psy9427         142 NGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSG----------GQCVSVCQGACGPNALCRAVGKRPVCAC  211 (324)
Q Consensus       142 ~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~----------~~C~d~C~~~C~~~~~C~~~~g~y~C~C  211 (324)
                      ..+|+|.|++||+|..+.   .+++++ .....+ ....|.+          +.-++.|..+|.++++|++...+|+|.|
T Consensus       184 ~~~y~C~Cp~Gf~G~~c~---~~i~ec-~~~~~c-~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~sy~CeC  258 (267)
T 4fbr_A          184 TMTYNGEGPIGFRGTLTS---PDTYTV-ENQWGG-STAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEG  258 (267)
T ss_dssp             EEEETTSCCEEEEEEEEE---TTEEEE-EEECSC-TTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEEETTSC
T ss_pred             CCCeEEeCCCCccccccc---ccccee-ccCCCc-cCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcceeecC
Confidence            899999999999987632   244543 222111 1223333          2213444448999999999999999999


Q ss_pred             CCCCcc
Q psy9427         212 PDGFSA  217 (324)
Q Consensus       212 ~~Gy~g  217 (324)
                      |+||+|
T Consensus       259 p~GF~G  264 (267)
T 4fbr_A          259 PIGFRA  264 (267)
T ss_dssp             CEEEEE
T ss_pred             CCCccc
Confidence            999997

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.61  E-value=2.7e-16  Score=133.73  Aligned_cols=118  Identities=29%  Similarity=0.702  Sum_probs=98.0

Q ss_pred             cc--ccCCC----CCCCCCCCEeeeCC-----CceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCC
Q psy9427          12 TC--WNSCD----GVSCGVNAVCVVNN-----HEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPAC   80 (324)
Q Consensus        12 ~c--~~~C~----~~~C~~~~~C~~~~-----~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C   80 (324)
                      .|  +++|.    .+||.++++|+++.     ++|+|.|++| |+|+.. .|.                       +++|
T Consensus        40 ~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G-~~g~~~-~C~-----------------------~d~C   94 (186)
T 1z1y_A           40 TCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEG-YTLXED-TCV-----------------------LDVC   94 (186)
T ss_dssp             EEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTT-EEEETT-EEE-----------------------EGGG
T ss_pred             ccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCC-CccCCC-CCC-----------------------CCcC
Confidence            55  46798    67899999999998     8999999999 998532 122                       6788


Q ss_pred             CCCCCCCCCEEe----eCCCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCCCC-CCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          81 DSGACGTNAVCI----PEDHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSNPC-HPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        81 ~~~~C~~~~~C~----~~~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~~C-~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      ...+|.++++|+    ++.++|+|.|++||+|.+.....|+++ +++| . ++| ..+++|++   +.++|+|+|++||+
T Consensus        95 ~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C-~-~~C~~~~~~C~n---~~g~y~C~C~~G~~  169 (186)
T 1z1y_A           95 QYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETAC-Q-LXCNTDNEVCXN---VEGVYXCQCMEGFT  169 (186)
T ss_dssp             TTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCC-C-CCCCTTTEEEEE---ETTEEEEEECTTCE
T ss_pred             cCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcc-c-ccccccCcceec---CCCCeeeECCCCCc
Confidence            888899999999    888899999999999943222789875 4889 4 489 88999999   99999999999999


Q ss_pred             cCCCC
Q psy9427         155 GDPYK  159 (324)
Q Consensus       155 g~~~~  159 (324)
                      |+...
T Consensus       170 g~~~~  174 (186)
T 1z1y_A          170 FDXEX  174 (186)
T ss_dssp             EETTT
T ss_pred             cCccc
Confidence            98754

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.56  E-value=1.1e-15  Score=120.31  Aligned_cols=110  Identities=25%  Similarity=0.565  Sum_probs=85.9

Q ss_pred             cccCCCCCCCCCCCEeeeC-CCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEE
Q psy9427          13 CWNSCDGVSCGVNAVCVVN-NHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVC   91 (324)
Q Consensus        13 c~~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C   91 (324)
                      -+|+|..+||.+  +|+++ .++|+|.|++| |+|....   .                   ..|.++|...+|.  ++|
T Consensus         3 dideC~~~pC~~--~C~~~~~g~y~C~C~~G-y~g~~~~---~-------------------~~C~~~C~~~~C~--~~C   55 (118)
T 1dx5_I            3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEG-FAPIPHE---P-------------------HRCQMFCNQTACP--ADC   55 (118)
T ss_dssp             CCCGGGGCCCSS--EEEECSSSCEEEECCTT-EEEETTE---E-------------------EEEEECCCSSEEE--CEE
T ss_pred             ccccCCCCCCCC--CCCCCCCCCEEeECCCC-ccccCCC---C-------------------CccccccCCCCCC--Ccc
Confidence            467888899973  99999 99999999999 9886321   0                   0112334445564  688


Q ss_pred             eeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427          92 IPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus        92 ~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                      ++ .++|.|.|++||+++.  ...|+++ +||+..++|  +++|++   ++++|+|+|++||+|...
T Consensus        56 ~~-~~~y~C~C~~Gy~~~~--g~~C~di-deC~~~~~C--~~~C~n---~~g~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           56 DP-NTQASCECPEGYILDD--GFICTDI-DECENGGFC--SGVCHN---LPGTFECICGPDSALAGQ  113 (118)
T ss_dssp             CT-TSTTCEECCTTEEEET--TTEEEEC-CHHHHCSSC--SSEEEE---CSSSEEEEECSSSSCEEE
T ss_pred             cC-CCCeEeECCCCccCCC--CCccccc-cccCCCCCC--cCeEEe---CCCCEEEECCCCCccCCC
Confidence            87 5899999999999643  1889888 999444789  799999   999999999999998653

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.50  E-value=2.9e-15  Score=117.89  Aligned_cols=106  Identities=24%  Similarity=0.616  Sum_probs=82.1

Q ss_pred             cCCCCCCCCCCCCEEeeC-CCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCcc
Q psy9427          77 IPACDSGACGTNAVCIPE-DHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVG  155 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g  155 (324)
                      ||+|..+||.  ++|+++ .++|.|.|++||+|.......|+   ++| ...+|.  ++|++   . ++|+|+|++||++
T Consensus         4 ideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~---~~C-~~~~C~--~~C~~---~-~~y~C~C~~Gy~~   71 (118)
T 1dx5_I            4 VDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQ---MFC-NQTACP--ADCDP---N-TQASCECPEGYIL   71 (118)
T ss_dssp             CCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETTEEEEEE---ECC-CSSEEE--CEECT---T-STTCEECCTTEEE
T ss_pred             cccCCCCCCC--CCCCCCCCCCEEeECCCCccccCCCCCccc---ccc-CCCCCC--CcccC---C-CCeEeECCCCccC
Confidence            7889888997  399999 89999999999998532111332   224 344564  78987   5 8899999999997


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         156 DPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       156 ~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +. ...|++++||.. .+                   +|  +++|+++.++|+|.|++||+|
T Consensus        72 ~~-g~~C~dideC~~-~~-------------------~C--~~~C~n~~g~y~C~C~~G~~g  110 (118)
T 1dx5_I           72 DD-GFICTDIDECEN-GG-------------------FC--SGVCHNLPGTFECICGPDSAL  110 (118)
T ss_dssp             ET-TTEEEECCHHHH-CS-------------------SC--SSEEEECSSSEEEEECSSSSC
T ss_pred             CC-CCccccccccCC-CC-------------------CC--cCeEEeCCCCEEEECCCCCcc
Confidence            65 456888998843 12                   47  689999999999999999986

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.49  E-value=2.8e-14  Score=131.40  Aligned_cols=147  Identities=26%  Similarity=0.680  Sum_probs=64.2

Q ss_pred             CCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCC--CCcccCCCCCCcCCCCCceeCCCC----cc-cCCCCCCCCCCC
Q psy9427          16 SCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNI--ECRQVPCVHNHDCSTSHACDLLSH----TC-IPACDSGACGTN   88 (324)
Q Consensus        16 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~--~C~~~~C~~~~~C~~~~~C~c~~~----~C-i~~C~~~~C~~~   88 (324)
                      .|. ++|.++|+|.+   .+.|.|++| |+|+...  .|.. +|.+++.|...+.|.|..|    .| .+.|. .+|.++
T Consensus       150 ~C~-~~C~~~G~C~~---~~~C~C~~G-~~G~~C~~~~C~~-~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~-~~C~~~  222 (324)
T 2ygq_A          150 ECP-GGCRNGGFCNE---RRICECPDG-FHGPHCEKALCTP-RCMNGGLCVTPGFCICPPGFYGVNCDKANCS-TTCFNG  222 (324)
T ss_dssp             CCS-SCCCSSCEECT---TSCEECCTT-EESSSSCEESSSS-CCCTTCEECSSCCEECCTTCBTTTTCBCCCS-SCCCSS
T ss_pred             CCC-CCCCCCCEECC---CCeEECCCC-CcCCCCCCCCCCC-CCCCCCEEcCCCEEeCCCCccCCCcccCcCC-CCCCCC
Confidence            453 57999999975   478999999 9997543  3443 6888888887788888766    45 44564 578888


Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ++|++   .+.|.|++||+|     ..|+.  ++| . .+|.++++|+.      .++|.|++||+|+.+    . .++|
T Consensus       223 G~C~~---~~~C~C~~G~~G-----~~C~~--~~C-~-~~C~~~g~C~~------~~~C~C~~G~~G~~C----~-~~~C  279 (324)
T 2ygq_A          223 GTCFY---PGKCICPPGLEG-----EQCEI--SKC-P-QPCRNGGKCIG------KSKCKCSKGYQGDLC----S-KPVC  279 (324)
T ss_dssp             CCBSC---SSCBCCCTTCCT-----TTTC---------------------------------------------------
T ss_pred             CeeCC---CCeeeCCCCccC-----CCCCc--CcC-C-CcCCCCCEECC------CCEEECCCCCcCCCC----c-CCCC
Confidence            88865   367888888888     66753  566 2 57877888864      368888888888763    2 2233


Q ss_pred             CCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         169 PRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       169 ~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                                            ..+|.++++|++   .++|.|++||+|
T Consensus       280 ----------------------~~~C~~~g~C~~---~~~C~C~~G~~G  303 (324)
T 2ygq_A          280 ----------------------EPGCGAHGTCHE---PNKCQCQEGWHG  303 (324)
T ss_dssp             -------------------------------------------------
T ss_pred             ----------------------CCCCCCCCEECC---CCEeECCCCCcC
Confidence                                  225777889986   479999999998

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.45  E-value=3.2e-15  Score=122.21  Aligned_cols=114  Identities=23%  Similarity=0.456  Sum_probs=79.9

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC-----------CCCC-CCCCCCCCeeecCCCCCCC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN-----------LCRD-SNPCHPTARCEDTGATNGK  144 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~-----------~C~~-~~~C~~~~~C~~~~~~~g~  144 (324)
                      ||+|..+||.+ ++|+++.++|+|.|++||+|+... ..|+++ +           .|.. .+.|...+.|.+   ..++
T Consensus         4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~-~~C~~~-~~~~C~~~~~g~~C~~~~~~c~~~~~C~~---~~g~   77 (147)
T 2w86_A            4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK-TICIET-IKGTCWQTVIDGRCEININGATLKSQCCS---SLGA   77 (147)
T ss_dssp             CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS-SBEEEC-CCEEEEEEEETTEEEEEEEEEECHHHHHT---TTCS
T ss_pred             CccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC-CeecCC-CCCcccCCCCCCccccCCCccccCCcccc---CcCc
Confidence            78998899974 799999999999999999986543 556543 1           1200 011222223444   3343


Q ss_pred             ----------eeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCC
Q psy9427         145 ----------VVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDG  214 (324)
Q Consensus       145 ----------~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~G  214 (324)
                                |.|.|++||++.. ...|++++||+...+                   +|.+ ++|+++.++|+|.|++|
T Consensus        78 ~~g~~C~~c~~~C~C~~Gy~~~~-g~~C~dideC~~~~~-------------------~C~~-g~C~n~~g~y~C~C~~G  136 (147)
T 2w86_A           78 AWGSPCTLCQVDPICGKGYSRIK-GTQCEDIDECEVFPG-------------------VCKN-GLCVNTRGSFKCQCPSG  136 (147)
T ss_dssp             EETTTTEECCCCTTTCTTEEEEE-TTEEEECCHHHHSTT-------------------CSSS-SEEEEETTEEEEECCTT
T ss_pred             ccCCCcccCCCcccCCCccccCC-CCccCccccccCCCC-------------------CCCC-CEEECCCCCEEeeCCCC
Confidence                      7889999997521 245888888854333                   3664 59999999999999999


Q ss_pred             Ccc
Q psy9427         215 FSA  217 (324)
Q Consensus       215 y~g  217 (324)
                      |+|
T Consensus       137 y~g  139 (147)
T 2w86_A          137 MTL  139 (147)
T ss_dssp             CCB
T ss_pred             Ccc
Confidence            997

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.41  E-value=1.4e-14  Score=118.42  Aligned_cols=132  Identities=20%  Similarity=0.382  Sum_probs=82.5

Q ss_pred             cccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCC-CCCcccCCCCCCcCCCCCceeCCCCcc---cCCCCC------
Q psy9427          13 CWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPN-IECRQVPCVHNHDCSTSHACDLLSHTC---IPACDS------   82 (324)
Q Consensus        13 c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~-~~C~~~~C~~~~~C~~~~~C~c~~~~C---i~~C~~------   82 (324)
                      -+|+|+.+||.+ ++|+++.++|+|+|++| |+++.. ..|.+.   ..+.|...+    ..+.|   +++|..      
T Consensus         3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G-~~g~~~~~~C~~~---~~~~C~~~~----~g~~C~~~~~~c~~~~~C~~   73 (147)
T 2w86_A            3 DIDECESSPCIN-GVCKNSPGSFICECSSE-STLDPTKTICIET---IKGTCWQTV----IDGRCEININGATLKSQCCS   73 (147)
T ss_dssp             CCCGGGGCCSBT-SEEEEETTEEEEECCTT-EEECTTSSBEEEC---CCEEEEEEE----ETTEEEEEEEEEECHHHHHT
T ss_pred             cCccCcCCCCCC-CEeECCCCCEEeECCCC-cccCCCCCeecCC---CCCcccCCC----CCCccccCCCccccCCcccc
Confidence            468898899984 79999999999999999 888643 234431   001111000    00111   222210      


Q ss_pred             -CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCC
Q psy9427          83 -GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKT  160 (324)
Q Consensus        83 -~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~  160 (324)
                       .....++.|.  .-.|.|.|++||++..  ...|+++ |||+. +.+|.+ ++|++   +.++|+|.|++||+|+...+
T Consensus        74 ~~g~~~g~~C~--~c~~~C~C~~Gy~~~~--g~~C~di-deC~~~~~~C~~-g~C~n---~~g~y~C~C~~Gy~g~~~~~  144 (147)
T 2w86_A           74 SLGAAWGSPCT--LCQVDPICGKGYSRIK--GTQCEDI-DECEVFPGVCKN-GLCVN---TRGSFKCQCPSGMTLDATGR  144 (147)
T ss_dssp             TTCSEETTTTE--ECCCCTTTCTTEEEEE--TTEEEEC-CHHHHSTTCSSS-SEEEE---ETTEEEEECCTTCCBCTTSS
T ss_pred             CcCcccCCCcc--cCCCcccCCCccccCC--CCccCcc-ccccCCCCCCCC-CEEEC---CCCCEEeeCCCCCccCCCCC
Confidence             0000111121  1237889999997411  1899988 99932 345974 69999   99999999999999987554


Q ss_pred             CC
Q psy9427         161 GC  162 (324)
Q Consensus       161 ~C  162 (324)
                      .|
T Consensus       145 ~C  146 (147)
T 2w86_A          145 IC  146 (147)
T ss_dssp             CB
T ss_pred             ee
Confidence            44

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.40  E-value=9.5e-13  Score=131.69  Aligned_cols=190  Identities=21%  Similarity=0.456  Sum_probs=122.1

Q ss_pred             cccCCCCCCCCCCCEeeeCCCcee---eeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC----CCC
Q psy9427          13 CWNSCDGVSCGVNAVCVVNNHEAR---CFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS----GAC   85 (324)
Q Consensus        13 c~~~C~~~~C~~~~~C~~~~~~~~---C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~----~~C   85 (324)
                      |.-+|..+||.+++.|.+..|.|.   |.|++| |+|.... +..     +.     +     .....++|..    .+|
T Consensus       433 C~C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~G-y~G~~Ce-~~~-----~~-----~-----~~~~~~~C~~~~~~~~C  495 (690)
T 3fcs_B          433 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPG-WLGSQCE-CSE-----ED-----Y-----RPSQQDECSPREGQPVC  495 (690)
T ss_dssp             CSCGGGTTCCTTCTTTTTTSEEEETTEEEECTT-CCSSSSC-CSC-----C----------------CCCCSSSSSSCGG
T ss_pred             cccCCcCCCCCCCCcccCCCCeEeCCceEeCCC-ccCCcee-ecc-----Cc-----c-----CCccCCcCCCCCCCCCC
Confidence            444677889999999998888888   999999 9996431 110     00     0     0011344543    358


Q ss_pred             CCCCEEeeCCCCcEeeCC----CCCcCCCCCCCcccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427          86 GTNAVCIPEDHRPVCHCP----VGTHPSPSPDVHCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYK  159 (324)
Q Consensus        86 ~~~~~C~~~~~~~~C~C~----~G~~g~~~~~~~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~  159 (324)
                      .++++|+.    +.|.|+    +||.|     ..|+...++|...  .+|..+++|.+       ++|.|++||+|..+.
T Consensus       496 s~~G~C~~----g~C~C~~~~~~Gy~G-----~~Ce~~~~~C~~~~~~~C~~~G~C~~-------g~C~C~~Gy~G~~Ce  559 (690)
T 3fcs_B          496 SQRGECLC----GQCVCHSSDFGKITG-----KYCECDDFSCVRYKGEMCSGHGQCSC-------GDCLCDSDWTGYYCN  559 (690)
T ss_dssp             GGSEEECS----SSEEECCCSSCCCBS-----TTSCBCSSCCCBSSSSBGGGSEEEET-------TEEEECTTEESSSSC
T ss_pred             CCCCEEEC----CeeEeecCCCCCeeC-----CCcCcccCcCcCCCCCCCCCCCEecC-------CeeECcCCCcCCCCc
Confidence            88899973    689999    99999     7887433788321  37888899965       799999999998854


Q ss_pred             CCC-CCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeC-CCCCccCCCCCCCCccccCCCCCCCC
Q psy9427         160 TGC-VPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCAC-PDGFSAVGGEARVGCFREMSACAGDQ  237 (324)
Q Consensus       160 ~~C-~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C-~~Gy~g~~~~~~~~C~~~~~~C~~~~  237 (324)
                        | .++++|.....                  .+|.++++|++    .+|.| ++||+|.....-..|   +..|.+++
T Consensus       560 --C~~~~~~C~~~~g------------------~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C~~C---~~~C~~~g  612 (690)
T 3fcs_B          560 --CTTRTDTCMSSNG------------------LLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTC---PDACTFKK  612 (690)
T ss_dssp             --EECCCTTTBCTTS------------------SBTSSSCEEET----TEEECCSTTCBSTTSCBCTTS---CCTTTSCC
T ss_pred             --cCCCCCcccCCCC------------------CCCCCCCEEeC----CEEECCCCCccCCCcCcCCCC---CCCCCCCC
Confidence              3 24555632111                  15888999976    28999 999998432211123   23444444


Q ss_pred             ccCCCCCcCCCCcccCCCCCCCCCCCCCcccCCcccCCCCC
Q psy9427         238 ECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTS  278 (324)
Q Consensus       238 ~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~  278 (324)
                      .|..    |..+            +.|..|....|...|..
T Consensus       613 ~Cv~----C~~g------------~tG~~C~~~~C~~~C~~  637 (690)
T 3fcs_B          613 ECVE----CKKF------------DRGALHDENTCNRYCRD  637 (690)
T ss_dssp             GGGT----TTTT------------CCSSSSSSSCSTTTCCC
T ss_pred             Cccc----CCCC------------CccCCCCccccccccCC
Confidence            4430    2222            55666666666666654

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.38  E-value=1.4e-13  Score=115.13  Aligned_cols=90  Identities=24%  Similarity=0.637  Sum_probs=66.0

Q ss_pred             CCC-CCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCC-CCCCCeeecCCCCCCCeeeeCCCCCccCCCCCC
Q psy9427          84 ACG-TNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNP-CHPTARCEDTGATNGKVVCSCPELSVGDPYKTG  161 (324)
Q Consensus        84 ~C~-~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~-C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~  161 (324)
                      .|. .++.|++   .|.|.|++||+|     ..|+    +| ...+ |.+ ++|+      ++|+|+|++||+|..    
T Consensus        71 ~C~~~~g~C~~---~~~C~C~~G~~G-----~~C~----~C-~~~~~C~~-g~C~------~~~~C~C~~G~~G~~----  126 (169)
T 2vj2_A           71 GCSPKHGSCKL---PGDCRCQYGWQG-----LYCD----KC-IPHPGCVH-GICN------EPWQCLCETNWGGQL----  126 (169)
T ss_dssp             TCCTTTEECSS---TTCCEECTTEES-----SSSC----EE-CCCTTCSS-EECS------STTCCEECTTEETTT----
T ss_pred             CCCCCCcccCC---CCeeECCCCCCC-----CCcc----cC-CCCCCCCC-CCcC------CCCEEeCCCCCCCCc----
Confidence            354 4567764   589999999998     6664    34 3333 753 4774      468999999999865    


Q ss_pred             CC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeC-CCCceeeCCCCCcc
Q psy9427         162 CV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAV-GKRPVCACPDGFSA  217 (324)
Q Consensus       162 C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~-~g~y~C~C~~Gy~g  217 (324)
                      |. ++++|.. .                   .+|.++++|+++ .++|+|.|++||+|
T Consensus       127 C~~~~~~C~~-~-------------------~~C~~~g~C~~~~~~~~~C~C~~G~~G  164 (169)
T 2vj2_A          127 CDKDLNYCGT-H-------------------QPCLNGGTCSNTGPDKYQCSCPEGYSG  164 (169)
T ss_dssp             TCEESCHHHH-T-------------------CCCCTTCEEEECSTTCEEEECCTTCCS
T ss_pred             ccCCCCCCCC-C-------------------CCCCCCCEEcCCCCCCcEeECCCCCcC
Confidence            65 6666632 1                   158889999996 89999999999997

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.33  E-value=1.6e-12  Score=95.28  Aligned_cols=73  Identities=27%  Similarity=0.664  Sum_probs=63.4

Q ss_pred             cCCCCC-CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCcc
Q psy9427          77 IPACDS-GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVG  155 (324)
Q Consensus        77 i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g  155 (324)
                      ||+|.. .+|.+ ++|+++.++|+|.|++||++++   ..|+++ ++|+..++|.+ ++|++   +.++|+|+|++||+|
T Consensus         5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g---~~C~di-deC~~~~~C~~-~~C~n---~~g~y~C~C~~G~~g   75 (82)
T 1emn_A            5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAG---NECVDT-DECSVGNPCGN-GTCKN---VIGGFECTCEEGFEP   75 (82)
T ss_dssp             CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEET---TEEEEC-CGGGTCCTTSS-SCEEE---CSSSEEECCSSSSCC
T ss_pred             cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCC---CccCCc-ccccCCCCCCC-CEeEC---CCCCEEeECCCCeEe
Confidence            788975 78974 8999999999999999998533   899888 99954779974 69999   999999999999998


Q ss_pred             CCC
Q psy9427         156 DPY  158 (324)
Q Consensus       156 ~~~  158 (324)
                      +..
T Consensus        76 ~~~   78 (82)
T 1emn_A           76 GPM   78 (82)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            874

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.30  E-value=8.2e-16  Score=135.94  Aligned_cols=176  Identities=9%  Similarity=-0.076  Sum_probs=110.2

Q ss_pred             EeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEeeCCCCC
Q psy9427          27 VCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGT  106 (324)
Q Consensus        27 ~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C~C~~G~  106 (324)
                      .+.|..|.|.+.+.|| +.+.....+...                     +.++. .+|.++++|++..++|.|.|++||
T Consensus         5 ~~~n~~Gg~s~~~~pg-g~~~~g~~~~~n---------------------~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf   61 (267)
T 4fbr_A            5 LVQNQWGGSQATWNPG-GLWLIGARDKQN---------------------VVALD-IKSDDGGKTLKGTMTYNGEGPIGF   61 (267)
T ss_dssp             EEEEECSSTTSCCEEE-EEEECCCCSSCC---------------------EEEEE-EECSSTTSEEEEEEEETTSCCEEE
T ss_pred             eEeecCCcccCCcCCC-Cceeeccccccc---------------------cccCC-CCcCCCCeecCCCCCeEEeCCCCc
Confidence            4567788888888888 554211111110                     22222 356677788877778888888888


Q ss_pred             cCCCC-------------------------CCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCC
Q psy9427         107 HPSPS-------------------------PDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTG  161 (324)
Q Consensus       107 ~g~~~-------------------------~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~  161 (324)
                      +|..-                         ....|+++ ++| ...||.++++|++   ...+|+|+|+.||+|..+.  
T Consensus        62 ~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~-~eC-~s~pC~ngG~C~~---~~~sy~C~C~~Gf~G~~Ce--  134 (267)
T 4fbr_A           62 RGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQN-IVA-VSIKSNDGGKTLT---GTTTYNGEGPIGFKSEVTD--  134 (267)
T ss_dssp             EEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCC-EEE-EEEECSSTTSEEE---EEEEETTSCCEEEEEEECC--
T ss_pred             ccccccccccccccccCcCCCcccCCCeeeccCccccc-ccc-CCCCCCCCCEEec---CCccEEeeCCCCccccCCC--
Confidence            76110                         00223333 345 4567888999999   8899999999999998743  


Q ss_pred             CCCCCCCCC----CCCCCCCCCcccCC-cc---cCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCC
Q psy9427         162 CVPQGQCPR----GDADCPPSSRCSGG-QC---VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSAC  233 (324)
Q Consensus       162 C~~~~eC~~----~~~~C~~~~~C~~~-~C---~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C  233 (324)
                       .++++|..    ....|....+|+.+ +|   |+.+..+|.++++|++..++|+|.||+||+|      ..|+..+++|
T Consensus       135 -~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G------~~c~~~i~ec  207 (267)
T 4fbr_A          135 -GDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG------TLTSPDTYTV  207 (267)
T ss_dssp             -CCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE------EEEETTEEEE
T ss_pred             -CCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc------ccccccccee
Confidence             13444311    11223333344442 33   4433348999999999999999999999998      3455545555


Q ss_pred             CCCCcc
Q psy9427         234 AGDQEC  239 (324)
Q Consensus       234 ~~~~~C  239 (324)
                      ++..-|
T Consensus       208 ~~~~~c  213 (267)
T 4fbr_A          208 ENQWGG  213 (267)
T ss_dssp             EEECSC
T ss_pred             ccCCCc
Confidence            444334

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.30  E-value=1.4e-12  Score=108.97  Aligned_cols=130  Identities=25%  Similarity=0.506  Sum_probs=94.6

Q ss_pred             CcccccCCCCC-CCCCCCEeeeCCCceeeeeCCCeeecCCCC--CCcccCCC-CCCcCCCCCceeCCCC----cccCCCC
Q psy9427          10 TLTCWNSCDGV-SCGVNAVCVVNNHEARCFCPPGSYVGDPNI--ECRQVPCV-HNHDCSTSHACDLLSH----TCIPACD   81 (324)
Q Consensus        10 ~~~c~~~C~~~-~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~--~C~~~~C~-~~~~C~~~~~C~c~~~----~Ci~~C~   81 (324)
                      ...|...|... .|..+++|..   ..+|+|++| |+|+...  .|.. .|. .++.|...+.|.|..+    .| ++|.
T Consensus        27 G~~C~~~C~~~~~c~~~g~C~~---~g~C~C~~G-~~G~~C~~~~C~~-~C~~~~g~C~~~~~C~C~~G~~G~~C-~~C~  100 (169)
T 2vj2_A           27 GFGCNKFCRPRDDFFGHYACDQ---NGNKTCMEG-WMGPECNRAICRQ-GCSPKHGSCKLPGDCRCQYGWQGLYC-DKCI  100 (169)
T ss_dssp             TTTTCEECCCEEETTEEEEECS---SCCEEECTT-EESTTSCEECCCT-TCCTTTEECSSTTCCEECTTEESSSS-CEEC
T ss_pred             CCCcccccCCCCCcCCCCEeCC---CCeeECCCC-CcCCCCCCCCCCC-CCCCCCcccCCCCeeECCCCCCCCCc-ccCC
Confidence            34455556542 4666778853   347999999 9986432  2333 454 4567877888888776    44 2354


Q ss_pred             CCC-CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCCCCCCCCCCeeecCCCC-CCCeeeeCCCCCccCCC
Q psy9427          82 SGA-CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRDSNPCHPTARCEDTGAT-NGKVVCSCPELSVGDPY  158 (324)
Q Consensus        82 ~~~-C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~~~~C~~~~~C~~~~~~-~g~~~C~C~~G~~g~~~  158 (324)
                      ..+ |.+ ++|+   ++|.|.|++||+|     ..|+ ++ ++|....+|.++++|++   + +++|+|+|++||+|..+
T Consensus       101 ~~~~C~~-g~C~---~~~~C~C~~G~~G-----~~C~~~~-~~C~~~~~C~~~g~C~~---~~~~~~~C~C~~G~~G~~C  167 (169)
T 2vj2_A          101 PHPGCVH-GICN---EPWQCLCETNWGG-----QLCDKDL-NYCGTHQPCLNGGTCSN---TGPDKYQCSCPEGYSGPNC  167 (169)
T ss_dssp             CCTTCSS-EECS---STTCCEECTTEET-----TTTCEES-CHHHHTCCCCTTCEEEE---CSTTCEEEECCTTCCSTTS
T ss_pred             CCCCCCC-CCcC---CCCEEeCCCCCCC-----CcccCCC-CCCCCCCCCCCCCEEcC---CCCCCcEeECCCCCcCcCc
Confidence            444 764 4887   5799999999998     7898 55 89943479999999999   6 78999999999999863

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.28  E-value=2.1e-12  Score=95.59  Aligned_cols=79  Identities=25%  Similarity=0.630  Sum_probs=63.5

Q ss_pred             cCCCCCCC--CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCC--CCCCCeeecCCCCCCCeeeeCCCC
Q psy9427          77 IPACDSGA--CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNP--CHPTARCEDTGATNGKVVCSCPEL  152 (324)
Q Consensus        77 i~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~--C~~~~~C~~~~~~~g~~~C~C~~G  152 (324)
                      ||+|...+  |.+ ++|+++.++|+|.|++||++.......|+++ ||| ..++  |. +++|++   +.|+|+|+|++|
T Consensus         3 ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-deC-~~~~~~C~-~~~C~n---~~g~y~C~C~~G   75 (86)
T 1lmj_A            3 IDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-DEC-QRDPLLCR-GGVCHN---TEGSYRCECPPG   75 (86)
T ss_dssp             CCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-CHH-HHCSSTTT-TSEEEE---ETTEEEEESCTT
T ss_pred             cccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-ccc-cCCCCcCC-CCEeEc---CCCCEEEECcCC
Confidence            78887655  864 5999999999999999999653322889988 999 5454  75 689999   999999999999


Q ss_pred             CccCCCCCCC
Q psy9427         153 SVGDPYKTGC  162 (324)
Q Consensus       153 ~~g~~~~~~C  162 (324)
                      |++......|
T Consensus        76 ~~~~~~~~~C   85 (86)
T 1lmj_A           76 HQLSPNISAC   85 (86)
T ss_dssp             SCCCSSSCCC
T ss_pred             cccCCCCCcc
Confidence            9988754333

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.25  E-value=4.9e-12  Score=92.69  Aligned_cols=74  Identities=26%  Similarity=0.689  Sum_probs=60.4

Q ss_pred             ccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCC
Q psy9427         116 CARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACG  195 (324)
Q Consensus       116 C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~  195 (324)
                      |+++ |+|+..++|. +++|++   +.++|+|.|++||++++  ..|.+++||.. ..                   +|.
T Consensus         2 C~di-deC~~~~~C~-~g~C~n---~~g~y~C~C~~Gy~~~g--~~C~dideC~~-~~-------------------~C~   54 (82)
T 1emn_A            2 AVDM-DECKEPDVCK-HGQCIN---TDGSYRCECPFGYILAG--NECVDTDECSV-GN-------------------PCG   54 (82)
T ss_dssp             CCCC-CSSSSTTSCS-SSEECC---CSSCCCEECCTTEEEET--TEEEECCGGGT-CC-------------------TTS
T ss_pred             CCcc-ccCCCCCCcC-CCEEEe---cCCCEEEECCCCeECCC--CccCCcccccC-CC-------------------CCC
Confidence            5677 9995457896 489999   99999999999998644  45889998843 22                   465


Q ss_pred             CCCeeeeCCCCceeeCCCCCcc
Q psy9427         196 PNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       196 ~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      + ++|+++.++|+|.|++||+|
T Consensus        55 ~-~~C~n~~g~y~C~C~~G~~g   75 (82)
T 1emn_A           55 N-GTCKNVIGGFECTCEEGFEP   75 (82)
T ss_dssp             S-SCEEECSSSEEECCSSSSCC
T ss_pred             C-CEeECCCCCEEeECCCCeEe
Confidence            4 68999999999999999987

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.22  E-value=2e-11  Score=95.13  Aligned_cols=93  Identities=20%  Similarity=0.468  Sum_probs=67.2

Q ss_pred             ccCCCCCC--------CCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC--
Q psy9427          14 WNSCDGVS--------CGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG--   83 (324)
Q Consensus        14 ~~~C~~~~--------C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~--   83 (324)
                      +|+|+.+|        |.++++|+++.++|+|.|++| |+|..   |+++.         .          +++|...  
T Consensus         6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G-~~G~~---C~~~~---------~----------~~~C~~~~~   62 (114)
T 1aut_L            6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSG-WEGRF---CQREV---------S----------FLNCSLDNG   62 (114)
T ss_dssp             --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTT-EESTT---SCEEC---------C----------SSSSSSGGG
T ss_pred             cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCC-CcCCC---cCcCC---------c----------CCcCcCCCC
Confidence            56788888        999999999999999999999 99853   44410         0          2356532  


Q ss_pred             CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427          84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED  137 (324)
Q Consensus        84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~  137 (324)
                      .|.  ++|+++.++|+|.|++||+|.... +.|+++     ...||...++++.
T Consensus        63 ~C~--~~C~n~~g~y~C~C~~G~~~~~~g-~~C~~~-----~~~pC~~~~~~i~  108 (114)
T 1aut_L           63 GCT--HYCLEEVGWRRCSCAPGYKLGDDL-LQCHPA-----VKFPCGRPWKRME  108 (114)
T ss_dssp             GCS--SEEEECSSSEEEECCTTEEECTTS-SCEEEC-----SSSCTTCCC----
T ss_pred             CCC--CEeECCCCCEEeECCCCeeECCCC-CccCcC-----cccCCCCCCccCC
Confidence            343  399999999999999999976544 788876     4458887777765

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.20  E-value=5e-12  Score=93.70  Aligned_cols=80  Identities=23%  Similarity=0.463  Sum_probs=63.3

Q ss_pred             cCCCCCCC--CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCC--CC
Q psy9427          77 IPACDSGA--CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCP--EL  152 (324)
Q Consensus        77 i~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~--~G  152 (324)
                      ||+|...+  | ++++|+++.++|+|.|++||++++.. ..|+++ +|| ..++|.  ++|++   ++|+|+|+|+  .|
T Consensus         3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g-~~C~di-deC-~~~~C~--~~C~n---~~g~y~C~C~g~~G   73 (87)
T 1z6c_A            3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKS-KSCEDI-DEC-SENMCA--QLCVN---YPGGYTCYCDGKKG   73 (87)
T ss_dssp             SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTT-TEEECC-CHH-HHSCCS--SEECC---CSSSCCEECCSSSC
T ss_pred             cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCC-CcCCCc-Cee-CCCCCC--CEEEc---cCCCEEEECCCCcC
Confidence            78887766  8 67899999999999999999965433 789888 999 678895  79999   9999999995  56


Q ss_pred             CccCCCCCCCCCC
Q psy9427         153 SVGDPYKTGCVPQ  165 (324)
Q Consensus       153 ~~g~~~~~~C~~~  165 (324)
                      |........|.++
T Consensus        74 ~~~~~~~~~C~di   86 (87)
T 1z6c_A           74 FKLAQDQKSCEVV   86 (87)
T ss_dssp             CBCCTTSSSCBCC
T ss_pred             CcccCCCCcceEC
Confidence            6544433345544

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.19  E-value=1.5e-11  Score=90.91  Aligned_cols=74  Identities=28%  Similarity=0.655  Sum_probs=59.9

Q ss_pred             cccCCCCCC--CCCCCEeeeCCCceeeeeCCCeeecCC--CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCC--CC
Q psy9427          13 CWNSCDGVS--CGVNAVCVVNNHEARCFCPPGSYVGDP--NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGA--CG   86 (324)
Q Consensus        13 c~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~y~g~~--~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~--C~   86 (324)
                      .+|+|...|  |.+ ++|+++.++|+|.|++| |++..  ...|.+                      ||+|...+  |.
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~G-y~~~~~~g~~C~d----------------------ideC~~~~~~C~   57 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEG-YESGFMMMKNCMD----------------------IDECQRDPLLCR   57 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEEEECCCSS-EEECTTTSSSEEE----------------------CCHHHHCSSTTT
T ss_pred             ccccccCCCCCCCC-CEEECCCCCEEeeCCCC-cCccCCCCCccCC----------------------cccccCCCCcCC
Confidence            367888765  964 59999999999999999 88642  345666                      88887655  64


Q ss_pred             CCCEEeeCCCCcEeeCCCCCcCCCC
Q psy9427          87 TNAVCIPEDHRPVCHCPVGTHPSPS  111 (324)
Q Consensus        87 ~~~~C~~~~~~~~C~C~~G~~g~~~  111 (324)
                       +++|+++.++|.|.|++||++++.
T Consensus        58 -~~~C~n~~g~y~C~C~~G~~~~~~   81 (86)
T 1lmj_A           58 -GGVCHNTEGSYRCECPPGHQLSPN   81 (86)
T ss_dssp             -TSEEEEETTEEEEESCTTSCCCSS
T ss_pred             -CCEeEcCCCCEEEECcCCcccCCC
Confidence             589999999999999999998654

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.19  E-value=1.4e-11  Score=92.10  Aligned_cols=79  Identities=18%  Similarity=0.392  Sum_probs=63.2

Q ss_pred             ceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCC
Q psy9427          34 EARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPD  113 (324)
Q Consensus        34 ~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~  113 (324)
                      +|+|.|++| |+|.-.+                          +++|...||      ++..++|.|.|++||+      
T Consensus         1 sy~C~C~~g-~~g~~c~--------------------------~~~c~~~pC------~n~~~~y~C~C~~G~~------   41 (91)
T 1tpg_A            1 SYQVICRDE-KTQMIYQ--------------------------QHQSWLRPV------LRSNRVEYCWCNSGRA------   41 (91)
T ss_dssp             CCCCCCBCS-SSCCBCC--------------------------SSCEEEEEC------SSSSCEEEEECSSSCC------
T ss_pred             CeeeECCCC-CcCCeEC--------------------------CCcccCCcc------ccCCCCcEeECCCCCc------
Confidence            589999999 8884221                          566654444      4557899999999996      


Q ss_pred             Cccc--ccCCCCCCCCCCCCCCeeecCCCCC--CCeeeeCCCCCccCC
Q psy9427         114 VHCA--RESNLCRDSNPCHPTARCEDTGATN--GKVVCSCPELSVGDP  157 (324)
Q Consensus       114 ~~C~--~~~~~C~~~~~C~~~~~C~~~~~~~--g~~~C~C~~G~~g~~  157 (324)
                       .|+  ++ ++| ..+||.++++|++   +.  ++|+|.|++||+|..
T Consensus        42 -~C~~~~~-~~C-~~~pC~ngg~C~~---~~~~~~~~C~C~~G~~G~~   83 (91)
T 1tpg_A           42 -QCHSVPV-KSC-SEPRCFNGGTCQQ---ALYFSDFVCQCPEGFAGKS   83 (91)
T ss_dssp             -BCCEECE-EEC-SSCCSCTTCEEEE---ESSSSCEEEECCTTCBSSS
T ss_pred             -ccccCcC-Ccc-cCCCCCCCCEeec---CCCCCCeEeECCCCCcCCc
Confidence             465  45 899 7789999999998   77  899999999999876

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=99.17  E-value=3.3e-11  Score=120.58  Aligned_cols=159  Identities=23%  Similarity=0.518  Sum_probs=104.0

Q ss_pred             CCCCCCCCCCCEEeeCCCCcE---eeCCCCCcCCCCCCCcccccC--------CCCCCC---CCCCCCCeeecCCCCCCC
Q psy9427          79 ACDSGACGTNAVCIPEDHRPV---CHCPVGTHPSPSPDVHCARES--------NLCRDS---NPCHPTARCEDTGATNGK  144 (324)
Q Consensus        79 ~C~~~~C~~~~~C~~~~~~~~---C~C~~G~~g~~~~~~~C~~~~--------~~C~~~---~~C~~~~~C~~~~~~~g~  144 (324)
                      +|...+|.+++.|.+..+.|.   |.|++||+|     ..|+..+        ++|...   .+|..+++|++       
T Consensus       436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G-----~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-------  503 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLG-----SQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-------  503 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCS-----SSSCCSCC------CCCCSSSSSSCGGGGSEEECS-------
T ss_pred             CCcCCCCCCCCcccCCCCeEeCCceEeCCCccC-----CceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-------
Confidence            566677888888887777777   999999999     6775432        567322   25888889965       


Q ss_pred             eeeeCC----CCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCC
Q psy9427         145 VVCSCP----ELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGG  220 (324)
Q Consensus       145 ~~C~C~----~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~  220 (324)
                      ++|.|+    +||+|..++   .++.+|.....                  .+|.++++|++    ++|.|++||+|...
T Consensus       504 g~C~C~~~~~~Gy~G~~Ce---~~~~~C~~~~~------------------~~C~~~G~C~~----g~C~C~~Gy~G~~C  558 (690)
T 3fcs_B          504 GQCVCHSSDFGKITGKYCE---CDDFSCVRYKG------------------EMCSGHGQCSC----GDCLCDSDWTGYYC  558 (690)
T ss_dssp             SSEEECCCSSCCCBSTTSC---BCSSCCCBSSS------------------SBGGGSEEEET----TEEEECTTEESSSS
T ss_pred             CeeEeecCCCCCeeCCCcC---cccCcCcCCCC------------------CCCCCCCEecC----CeeECcCCCcCCCC
Confidence            599999    999998743   14555532111                  15777899977    79999999998433


Q ss_pred             CCCCCccccCCCCCCC--CccCCCCCcCCCCcccCCC-CCCCCCCCCCcccC-CcccCCCCCCCCCCC
Q psy9427         221 EARVGCFREMSACAGD--QECLAGEEKCIGGRCRVAC-LSHSDCSEGERCIS-SLCQSPCTSHSQCPT  284 (324)
Q Consensus       221 ~~~~~C~~~~~~C~~~--~~C~~~~~~C~~~~C~~~C-~~~~~C~~~~~C~~-~~C~~~C~~~~~C~~  284 (324)
                      .    |...+++|...  ..|. .+..|++++|.  | ..+   +.|..|.. ..|.++|.+++.|..
T Consensus       559 e----C~~~~~~C~~~~g~~C~-~~G~C~~g~C~--C~~~G---y~G~~Ce~C~~C~~~C~~~g~Cv~  616 (690)
T 3fcs_B          559 N----CTTRTDTCMSSNGLLCS-GRGKCECGSCV--CIQPG---SYGDTCEKCPTCPDACTFKKECVE  616 (690)
T ss_dssp             C----EECCCTTTBCTTSSBTS-SSCEEETTEEE--CCSTT---CBSTTSCBCTTSCCTTTSCCGGGT
T ss_pred             c----cCCCCCcccCCCCCCCC-CCCEEeCCEEE--CCCCC---ccCCCcCcCCCCCCCCCCCCCccc
Confidence            2    21124455432  3454 33345555442  3 222   45677776 677788888888853

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.16  E-value=2.9e-11  Score=94.25  Aligned_cols=79  Identities=24%  Similarity=0.381  Sum_probs=61.7

Q ss_pred             cCCCCCCC--------CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC--CCCCCC-CCCCCCCeeecCCCCCCCe
Q psy9427          77 IPACDSGA--------CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES--NLCRDS-NPCHPTARCEDTGATNGKV  145 (324)
Q Consensus        77 i~~C~~~~--------C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~--~~C~~~-~~C~~~~~C~~~~~~~g~~  145 (324)
                      +|+|...|        |.++++|+++.++|.|.|++||+|     ..|+++.  ++|... ..|.  .+|++   +.++|
T Consensus         6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G-----~~C~~~~~~~~C~~~~~~C~--~~C~n---~~g~y   75 (114)
T 1aut_L            6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEG-----RFCQREVSFLNCSLDNGGCT--HYCLE---EVGWR   75 (114)
T ss_dssp             --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEES-----TTSCEECCSSSSSSGGGGCS--SEEEE---CSSSE
T ss_pred             cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcC-----CCcCcCCcCCcCcCCCCCCC--CEeEC---CCCCE
Confidence            56676666        889999999999999999999999     7788752  368321 2453  49999   99999


Q ss_pred             eeeCCCCCccCCCCCCCCCC
Q psy9427         146 VCSCPELSVGDPYKTGCVPQ  165 (324)
Q Consensus       146 ~C~C~~G~~g~~~~~~C~~~  165 (324)
                      +|+|++||+|......|+++
T Consensus        76 ~C~C~~G~~~~~~g~~C~~~   95 (114)
T 1aut_L           76 RCSCAPGYKLGDDLLQCHPA   95 (114)
T ss_dssp             EEECCTTEEECTTSSCEEEC
T ss_pred             EeECCCCeeECCCCCccCcC
Confidence            99999999987766667654

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.16  E-value=2.3e-11  Score=99.07  Aligned_cols=81  Identities=23%  Similarity=0.550  Sum_probs=67.5

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCC-CCCCCCCee-ecCCCCCCCeeeeCCCCCc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS-NPCHPTARC-EDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~-~~C~~~~~C-~~~~~~~g~~~C~C~~G~~  154 (324)
                      ||+|.++||.++++|++..++|.|.|++||+|     ..|+++ ++|... .+|..  +| ++   +.|+|+|.|++||+
T Consensus        48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G-----~~C~~~-deC~~~~~~C~~--~C~~n---~~g~y~C~C~~Gy~  116 (146)
T 1x7a_L           48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEG-----KNCELD-ATCNIKNGRCKQ--FCKTG---ADSKVLCSCTTGYR  116 (146)
T ss_dssp             --CCSSCSSCTTCEEEECSSCEEEECCSSEES-----TTTCEE-CCTTSGGGSCSS--BCCCC---SSSCCCCBCCTTEE
T ss_pred             cCcCCCCCCCCCCEeECCCCCEEEecCCCCcC-----CcCCCC-ccccCCCCCCcC--CCCCC---CCCCEEeEcCCCcE
Confidence            88999999999999999999999999999998     899998 999432 26753  99 99   99999999999999


Q ss_pred             cCCCCCCCCCCCCC
Q psy9427         155 GDPYKTGCVPQGQC  168 (324)
Q Consensus       155 g~~~~~~C~~~~eC  168 (324)
                      +...+..|.++++.
T Consensus       117 l~~dG~~C~~~~~~  130 (146)
T 1x7a_L          117 LAPDQKSCKPAVPF  130 (146)
T ss_dssp             ECTTSSSEEECSSS
T ss_pred             eCCCCCcCCCCCCC
Confidence            76655668776543

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=99.14  E-value=8e-11  Score=108.24  Aligned_cols=143  Identities=28%  Similarity=0.748  Sum_probs=69.3

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      ++|. .+|.++++|.+   .+.|.|++||+|     ..|+.  ++| . .+|.++++|++      .++|.|++||+|..
T Consensus       149 ~~C~-~~C~~~G~C~~---~~~C~C~~G~~G-----~~C~~--~~C-~-~~C~~~G~C~~------~~~C~C~~G~~G~~  209 (324)
T 2ygq_A          149 AECP-GGCRNGGFCNE---RRICECPDGFHG-----PHCEK--ALC-T-PRCMNGGLCVT------PGFCICPPGFYGVN  209 (324)
T ss_dssp             CCCS-SCCCSSCEECT---TSCEECCTTEES-----SSSCE--ESS-S-SCCCTTCEECS------SCCEECCTTCBTTT
T ss_pred             CCCC-CCCCCCCEECC---CCeEECCCCCcC-----CCCCC--CCC-C-CCCCCCCEEcC------CCEEeCCCCccCCC
Confidence            3453 67888999975   589999999999     77875  457 3 47988999975      37899999999886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCCCCCC
Q psy9427         158 YKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQ  237 (324)
Q Consensus       158 ~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C~~~~  237 (324)
                      +    .. .+|                      ..+|.++++|++.   ++|.|++||+|.... ...|   ..+|.+++
T Consensus       210 C----~~-~~C----------------------~~~C~~~G~C~~~---~~C~C~~G~~G~~C~-~~~C---~~~C~~~g  255 (324)
T 2ygq_A          210 C----DK-ANC----------------------STTCFNGGTCFYP---GKCICPPGLEGEQCE-ISKC---PQPCRNGG  255 (324)
T ss_dssp             T----CB-CCC----------------------SSCCCSSCCBSCS---SCBCCCTTCCTTTTC----------------
T ss_pred             c----cc-CcC----------------------CCCCCCCCeeCCC---CeeeCCCCccCCCCC-cCcC---CCcCCCCC
Confidence            3    21 223                      1247778888763   689999999873221 1123   12333334


Q ss_pred             ccCCCCCcCCCCcccCCCCCCCCCCCCCcccCCcccCCCCCCCCCCC
Q psy9427         238 ECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPT  284 (324)
Q Consensus       238 ~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~C~~  284 (324)
                      .|. ..     ++|  .|..+   +.|..|....|..+|.+++.|..
T Consensus       256 ~C~-~~-----~~C--~C~~G---~~G~~C~~~~C~~~C~~~g~C~~  291 (324)
T 2ygq_A          256 KCI-GK-----SKC--KCSKG---YQGDLCSKPVCEPGCGAHGTCHE  291 (324)
T ss_dssp             -----------------------------------------------
T ss_pred             EEC-CC-----CEE--ECCCC---CcCCCCcCCCCCCCCCCCCEECC
Confidence            442 11     111  11111   44567776777777877777764

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.13  E-value=6.8e-11  Score=96.23  Aligned_cols=86  Identities=20%  Similarity=0.568  Sum_probs=63.7

Q ss_pred             cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC--CC
Q psy9427           8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG--AC   85 (324)
Q Consensus         8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~--~C   85 (324)
                      |..-.-+|+|..+||.++++|++..++|+|.|++| |+|.   .|.+                      +++|...  +|
T Consensus        42 ~~~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G-~~G~---~C~~----------------------~deC~~~~~~C   95 (146)
T 1x7a_L           42 WKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVG-FEGK---NCEL----------------------DATCNIKNGRC   95 (146)
T ss_dssp             --------CCSSCSSCTTCEEEECSSCEEEECCSS-EEST---TTCE----------------------ECCTTSGGGSC
T ss_pred             hccCCCcCcCCCCCCCCCCEeECCCCCEEEecCCC-CcCC---cCCC----------------------CccccCCCCCC
Confidence            44344567899999999999999999999999999 9874   4665                      6677643  46


Q ss_pred             CCCCEE-eeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          86 GTNAVC-IPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        86 ~~~~~C-~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      ..  +| +++.++|.|.|++||++.+.. ..|+++ ++.
T Consensus        96 ~~--~C~~n~~g~y~C~C~~Gy~l~~dG-~~C~~~-~~~  130 (146)
T 1x7a_L           96 KQ--FCKTGADSKVLCSCTTGYRLAPDQ-KSCKPA-VPF  130 (146)
T ss_dssp             SS--BCCCCSSSCCCCBCCTTEEECTTS-SSEEEC-SSS
T ss_pred             cC--CCCCCCCCCEEeEcCCCcEeCCCC-CcCCCC-CCC
Confidence            53  89 899999999999999954433 789887 443

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.12  E-value=4.3e-11  Score=89.40  Aligned_cols=77  Identities=21%  Similarity=0.418  Sum_probs=60.9

Q ss_pred             CcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC--CCCCCCCCCCC
Q psy9427          97 RPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV--PQGQCPRGDAD  174 (324)
Q Consensus        97 ~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~--~~~eC~~~~~~  174 (324)
                      +|.|.|.+||+|     ..|+ + ++| ..+||      ++   ..++|+|+|++||+      .|.  ++++|..    
T Consensus         1 sy~C~C~~g~~g-----~~c~-~-~~c-~~~pC------~n---~~~~y~C~C~~G~~------~C~~~~~~~C~~----   53 (91)
T 1tpg_A            1 SYQVICRDEKTQ-----MIYQ-Q-HQS-WLRPV------LR---SNRVEYCWCNSGRA------QCHSVPVKSCSE----   53 (91)
T ss_dssp             CCCCCCBCSSSC-----CBCC-S-SCE-EEEEC------SS---SSCEEEEECSSSCC------BCCEECEEECSS----
T ss_pred             CeeeECCCCCcC-----CeEC-C-Ccc-cCCcc------cc---CCCCcEeECCCCCc------ccccCcCCcccC----
Confidence            589999999999     6663 4 777 44454      56   77899999999996      364  5666632    


Q ss_pred             CCCCCcccCCcccCCCccCCCCCCeeeeCC--CCceeeCCCCCcc
Q psy9427         175 CPPSSRCSGGQCVSVCQGACGPNALCRAVG--KRPVCACPDGFSA  217 (324)
Q Consensus       175 C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~--g~y~C~C~~Gy~g  217 (324)
                                       .+|.++++|++..  ++|+|.|++||+|
T Consensus        54 -----------------~pC~ngg~C~~~~~~~~~~C~C~~G~~G   81 (91)
T 1tpg_A           54 -----------------PRCFNGGTCQQALYFSDFVCQCPEGFAG   81 (91)
T ss_dssp             -----------------CCSCTTCEEEEESSSSCEEEECCTTCBS
T ss_pred             -----------------CCCCCCCEeecCCCCCCeEeECCCCCcC
Confidence                             1588999999987  9999999999997

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.07  E-value=5.1e-12  Score=104.73  Aligned_cols=112  Identities=22%  Similarity=0.498  Sum_probs=74.8

Q ss_pred             cCCCC-CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCC--CCC-CCCC--CCCCeeecCCCCCC----Cee
Q psy9427          77 IPACD-SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNL--CRD-SNPC--HPTARCEDTGATNG----KVV  146 (324)
Q Consensus        77 i~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~--C~~-~~~C--~~~~~C~~~~~~~g----~~~  146 (324)
                      ||||+ +++|. +++|+++.++|+|.|++||++++.. ..|+++ ++  |.. ..+|  ..+++|++   +.+    +|+
T Consensus         3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g-~~C~d~-~~~~C~~~~~~c~~~~~~~C~~---~~~~~~~~~~   76 (162)
T 1uzk_A            3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTR-VGCVDT-RSGNCYLDIRPRGDNGDTACSN---EIGVGVSKAS   76 (162)
T ss_dssp             CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTS-SBEECC-CCEEEEEEC----------CEE---EEEEEECHHH
T ss_pred             cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCC-CcccCC-CCCcccCCCcccCCCCCCcccC---CcCCcccCce
Confidence            78887 47896 6899999999999999999965433 889877 76  732 1234  34789998   777    799


Q ss_pred             eeCCCCCcc-CCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCC--CCccCCCCCC
Q psy9427         147 CSCPELSVG-DPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPD--GFSAVGGEAR  223 (324)
Q Consensus       147 C~C~~G~~g-~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~--Gy~g~~~~~~  223 (324)
                      |.|++||.. .+    |.                             .|..     +..++|+|.|++  ||++.  ...
T Consensus        77 C~C~~G~~~~~~----C~-----------------------------~C~~-----~~~~~y~C~C~~g~G~~~~--~~~  116 (162)
T 1uzk_A           77 CCCSLGKAWGTP----CE-----------------------------MCPA-----VNTSEYKILCPGGEGFRPN--PIT  116 (162)
T ss_dssp             HHTTTCCEETTT----TE-----------------------------ECCC-----TTSHHHHHHCTTCTTEEEC--TTT
T ss_pred             eeCCCCCCcCCC----cc-----------------------------cCCC-----CCCCCceeECCCCCCcccC--CCC
Confidence            999999983 22    21                             0111     245789999998  99873  222


Q ss_pred             CCccccCCCCCC
Q psy9427         224 VGCFREMSACAG  235 (324)
Q Consensus       224 ~~C~~~~~~C~~  235 (324)
                      ..|++ +++|..
T Consensus       117 ~~c~d-ideC~~  127 (162)
T 1uzk_A          117 VILED-IDECQE  127 (162)
T ss_dssp             CCEEE-CCHHHH
T ss_pred             CccCc-cccccC
Confidence            34666 655543

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.07  E-value=3.3e-11  Score=92.81  Aligned_cols=76  Identities=28%  Similarity=0.607  Sum_probs=30.2

Q ss_pred             cCCCCC--CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          77 IPACDS--GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        77 i~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      +++|..  ..|.  ++|+++.++|.|.|++||+|...  ..|+++ |||...++|.  ++|++   +.++|+|.|++||+
T Consensus        29 ~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g--~~C~di-deC~~~~~C~--~~C~n---~~gsy~C~C~~Gy~   98 (107)
T 2w2n_E           29 TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQ--RRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQ   98 (107)
T ss_dssp             CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETT--TEEEC------------------------------------
T ss_pred             CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCC--Cccccc-cccCCCCCcC--Ceeec---CCCCEEEECCCCce
Confidence            677764  3453  69999999999999999998432  789988 9995457885  79999   99999999999999


Q ss_pred             cCCCCCCC
Q psy9427         155 GDPYKTGC  162 (324)
Q Consensus       155 g~~~~~~C  162 (324)
                      ++.....|
T Consensus        99 ~~~d~~~C  106 (107)
T 2w2n_E           99 LDPHTKAC  106 (107)
T ss_dssp             --------
T ss_pred             ECCCCCcc
Confidence            87754333

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.07  E-value=7.6e-11  Score=95.49  Aligned_cols=82  Identities=20%  Similarity=0.338  Sum_probs=66.5

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCC---eeecCCCCCC-CeeeeCCCC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTA---RCEDTGATNG-KVVCSCPEL  152 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~---~C~~~~~~~g-~~~C~C~~G  152 (324)
                      +|+|.++||.++++|+++.++|.|.|++||+|     ..|++.++++ ...++.+++   +|++   +.+ +|+|.|++|
T Consensus        47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G-----~~C~~~~~~c-~~c~~~~~~C~~~C~~---~~g~~y~C~C~~G  117 (142)
T 2c4f_L           47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG-----RNCETHKDDQ-LICVNENGGCEQYCSD---HTGTKRSCRCHEG  117 (142)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEES-----TTSCEEGGGC-CSTTTGGGGCSSEEEC---CTTSCCEEECCTT
T ss_pred             cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccC-----CccccCcccc-ccccCCCCCccCEeEC---CCCCCEEEECCCC
Confidence            78998899999999999999999999999998     8898632665 333443344   9999   899 999999999


Q ss_pred             CccCCCCCCCCCCCC
Q psy9427         153 SVGDPYKTGCVPQGQ  167 (324)
Q Consensus       153 ~~g~~~~~~C~~~~e  167 (324)
                      |++...+..|.++++
T Consensus       118 y~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          118 YSLLADGVSCTPTVE  132 (142)
T ss_dssp             EEECTTSSCEEESSS
T ss_pred             ceECCCCCCCCCCCc
Confidence            997665566877665

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.06  E-value=5.2e-11  Score=88.14  Aligned_cols=70  Identities=26%  Similarity=0.580  Sum_probs=56.9

Q ss_pred             cccCCCCCC--CCCCCEeeeCCCceeeeeCCCeeecCC-CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427          13 CWNSCDGVS--CGVNAVCVVNNHEARCFCPPGSYVGDP-NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA   89 (324)
Q Consensus        13 c~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~y~g~~-~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~   89 (324)
                      -+|+|..+|  | ++++|+++.++|+|.|++| |++++ ...|.+                      |++|..++|.  +
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G-~~~~~~g~~C~d----------------------ideC~~~~C~--~   55 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEG-YRYNLKSKSCED----------------------IDECSENMCA--Q   55 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTT-CEEETTTTEEEC----------------------CCHHHHSCCS--S
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCC-ceECCCCCcCCC----------------------cCeeCCCCCC--C
Confidence            367898877  8 7889999999999999999 88643 235655                      8888878886  7


Q ss_pred             EEeeCCCCcEeeCC--CCCcC
Q psy9427          90 VCIPEDHRPVCHCP--VGTHP  108 (324)
Q Consensus        90 ~C~~~~~~~~C~C~--~G~~g  108 (324)
                      +|+++.++|.|.|+  +||..
T Consensus        56 ~C~n~~g~y~C~C~g~~G~~~   76 (87)
T 1z6c_A           56 LCVNYPGGYTCYCDGKKGFKL   76 (87)
T ss_dssp             EECCCSSSCCEECCSSSCCBC
T ss_pred             EEEccCCCEEEECCCCcCCcc
Confidence            99999999999995  55554

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.01  E-value=2.8e-10  Score=92.18  Aligned_cols=84  Identities=18%  Similarity=0.382  Sum_probs=62.6

Q ss_pred             ccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC--
Q psy9427          12 TCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA--   89 (324)
Q Consensus        12 ~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~--   89 (324)
                      .-+|+|..+||.++++|++..++|+|.|++| |+|.   .|...                     +++|..-++.+++  
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G-~~G~---~C~~~---------------------~~~c~~c~~~~~~C~   99 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPA-FEGR---NCETH---------------------KDDQLICVNENGGCE   99 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTEEEEECCTT-EEST---TSCEE---------------------GGGCCSTTTGGGGCS
T ss_pred             CccCcCcCCCcCCCCEEeCCCCCEEeeCCCC-ccCC---ccccC---------------------ccccccccCCCCCcc
Confidence            4467899999999999999999999999999 9884   34431                     2333222233333  


Q ss_pred             -EEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCC
Q psy9427          90 -VCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNL  122 (324)
Q Consensus        90 -~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~  122 (324)
                       +|+++.+ +|.|.|++||++.+.. ..|+++ ++
T Consensus       100 ~~C~~~~g~~y~C~C~~Gy~l~~dG-~~C~~~-~e  132 (142)
T 2c4f_L          100 QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VE  132 (142)
T ss_dssp             SEEECCTTSCCEEECCTTEEECTTS-SCEEES-SS
T ss_pred             CEeECCCCCCEEEECCCCceECCCC-CCCCCC-Cc
Confidence             8999999 9999999999954433 789887 44

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.00  E-value=1e-10  Score=99.30  Aligned_cols=92  Identities=23%  Similarity=0.561  Sum_probs=34.3

Q ss_pred             cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCccc-CCCCC--CC
Q psy9427           8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCI-PACDS--GA   84 (324)
Q Consensus         8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci-~~C~~--~~   84 (324)
                      |..-.-+|+|..+||.++|+|++..++|+|.|++| |+|.   .|...                     | ++|..  .+
T Consensus        36 w~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~G-f~G~---~Ce~~---------------------i~deC~~~~~~   90 (195)
T 1nfu_B           36 WNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG-FEGK---NCELF---------------------TRKLCSLDNGD   90 (195)
T ss_dssp             ----------------------------------------------------------------------CCGGGTGGGG
T ss_pred             cccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCC-ceec---ccccc---------------------ccccccCCCCC
Confidence            44444567899999999999999999999999999 8874   34431                     3 56654  35


Q ss_pred             CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCC
Q psy9427          85 CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPT  132 (324)
Q Consensus        85 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~  132 (324)
                      |..  +|+++.++|.|.|++||++.+.. ..|+++     ...||+..
T Consensus        91 C~~--~C~n~~gsy~C~C~~Gy~l~~dG-~~C~~~-----~~~PC~~~  130 (195)
T 1nfu_B           91 CDQ--FCHEEQNSVVCSCARGYTLADNG-KACIPT-----GPYPCGKQ  130 (195)
T ss_dssp             CSS--EEEEETTEEEEECCTTEEECTTS-SCEEES-----SSSCTTCC
T ss_pred             CCC--EeECCCCCeEEECCCCceeCCCC-CccccC-----CCCCCCCC
Confidence            654  99999999999999999944332 789876     34567544

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.99  E-value=1.2e-10  Score=93.28  Aligned_cols=90  Identities=23%  Similarity=0.576  Sum_probs=32.6

Q ss_pred             cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCccc-CCCCC--CC
Q psy9427           8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCI-PACDS--GA   84 (324)
Q Consensus         8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci-~~C~~--~~   84 (324)
                      |..-.-+|+|..+||.++|+|++..++|+|.|++| |+|.   .|...                     | ++|..  .+
T Consensus        36 ~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G-~~G~---~C~~~---------------------i~d~C~~~~~~   90 (134)
T 2vh0_B           36 WNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG-FEGK---NCELF---------------------TRKLCSLDNGD   90 (134)
T ss_dssp             ----------------------------------------------------------------------CCGGGTGGGG
T ss_pred             cccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCC-ccCC---ccccC---------------------CCCccccCCCC
Confidence            33344467899999999999999999999999999 8874   34431                     3 55654  34


Q ss_pred             CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCC
Q psy9427          85 CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCH  130 (324)
Q Consensus        85 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~  130 (324)
                      |..  +|+++.++|.|.|++||++.+.. ..|+++     ...||+
T Consensus        91 C~~--~C~~~~g~y~C~C~~Gy~l~~~g-~~C~~~-----~~~pC~  128 (134)
T 2vh0_B           91 CDQ--FCHEEQNSVVCSCARGYTLADNG-KACIPT-----GPYPCG  128 (134)
T ss_dssp             CSS--EEEEETTEEEEECCTTEEECTTS-SCEEES-----SSSCTT
T ss_pred             CCC--EeECCCCCEEEECCCCcEECCCC-CccCcC-----CCcCCC
Confidence            653  99999999999999999954432 788876     334664

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.96  E-value=9.6e-11  Score=93.94  Aligned_cols=80  Identities=24%  Similarity=0.558  Sum_probs=30.4

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      +|+|.++||.++++|+++.++|.|.|++||+|     ..|++.+ ++|... .+|..  +|++   +.++|+|.|++||+
T Consensus        42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G-----~~C~~~i~d~C~~~~~~C~~--~C~~---~~g~y~C~C~~Gy~  111 (134)
T 2vh0_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEG-----KNCELFTRKLCSLDNGDCDQ--FCHE---EQNSVVCSCARGYT  111 (134)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSS--EEEE---ETTEEEEECCTTEE
T ss_pred             cCcCCCCCCCCcCCcccCCCCEEeeCCCCccC-----CccccCCCCccccCCCCCCC--EeEC---CCCCEEEECCCCcE
Confidence            78998899999999999999999999999998     8898754 778332 35753  9999   99999999999999


Q ss_pred             cCCCCCCCCCCC
Q psy9427         155 GDPYKTGCVPQG  166 (324)
Q Consensus       155 g~~~~~~C~~~~  166 (324)
                      +...+..|.+++
T Consensus       112 l~~~g~~C~~~~  123 (134)
T 2vh0_B          112 LADNGKACIPTG  123 (134)
T ss_dssp             ECTTSSCEEESS
T ss_pred             ECCCCCccCcCC
Confidence            665555676553

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.95  E-value=7.1e-10  Score=101.56  Aligned_cols=82  Identities=26%  Similarity=0.533  Sum_probs=71.4

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCC--CCCCCCCCeeecCCCCCCCeeeeCCCCC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRD--SNPCHPTARCEDTGATNGKVVCSCPELS  153 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~--~~~C~~~~~C~~~~~~~g~~~C~C~~G~  153 (324)
                      +|+|..+||.++++|++..++|.|.|++||+|     ..|+ ++ +||..  .++|.+  .|++   +.++|+|.|++||
T Consensus         5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g-----~~C~~~~-~eC~~~~~~~C~~--~C~~---~~g~~~C~C~~g~   73 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEG-----SNCELAK-NECHPERTDGCQH--FCLP---GQESYTCSCAQGY   73 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCS-----SSSCCCS-SSCCTTCTTSCSS--EEEC---CSSSCEEECCTTE
T ss_pred             CCcCCCCCCCCCCEeECCCCCeEEECCCCCcC-----CccccCc-ccCCCCCCCCCcC--cccc---CCCeeEEeccccc
Confidence            68898899999999999999999999999998     8998 66 99943  268965  9999   9999999999999


Q ss_pred             ccCCCCCCCCCCCCCC
Q psy9427         154 VGDPYKTGCVPQGQCP  169 (324)
Q Consensus       154 ~g~~~~~~C~~~~eC~  169 (324)
                      ++......|.++++|.
T Consensus        74 ~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           74 RLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             ECCTTSSCCEECSSCC
T ss_pred             cccccccccccccccc
Confidence            9987667899888773

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.92  E-value=1.7e-10  Score=98.08  Aligned_cols=79  Identities=23%  Similarity=0.537  Sum_probs=29.9

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSV  154 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~  154 (324)
                      +++|..+||.++++|++..++|.|.|++||+|     ..|++.+ ++|... .+|..  +|++   +.|+|+|.|++||+
T Consensus        42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G-----~~Ce~~i~deC~~~~~~C~~--~C~n---~~gsy~C~C~~Gy~  111 (195)
T 1nfu_B           42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEG-----KNCELFTRKLCSLDNGDCDQ--FCHE---EQNSVVCSCARGYT  111 (195)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSS--EEEE---ETTEEEEECCTTEE
T ss_pred             CcccCCCCCCCCCEeECCCCCeeEeCCCCcee-----ccccccccccccCCCCCCCC--EeEC---CCCCeEEECCCCce
Confidence            88999899999999999999999999999998     8898755 789332 36753  9999   99999999999999


Q ss_pred             cCCCCCCCCCC
Q psy9427         155 GDPYKTGCVPQ  165 (324)
Q Consensus       155 g~~~~~~C~~~  165 (324)
                      +...+..|.++
T Consensus       112 l~~dG~~C~~~  122 (195)
T 1nfu_B          112 LADNGKACIPT  122 (195)
T ss_dssp             ECTTSSCEEES
T ss_pred             eCCCCCccccC
Confidence            66544557654

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.87  E-value=5.1e-10  Score=86.08  Aligned_cols=71  Identities=25%  Similarity=0.635  Sum_probs=28.0

Q ss_pred             ccCCCCC--CCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCE
Q psy9427          14 WNSCDGV--SCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAV   90 (324)
Q Consensus        14 ~~~C~~~--~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~   90 (324)
                      +++|...  +|.  ++|+++.++|+|.|++| |++.+...|++                      ||+|. +.+|.  ++
T Consensus        29 ~neC~~~~~~C~--~~C~n~~g~y~C~C~~G-y~g~~g~~C~d----------------------ideC~~~~~C~--~~   81 (107)
T 2w2n_E           29 TNECLDNNGGCS--YVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCS--QL   81 (107)
T ss_dssp             CCGGGTGGGGCS--SEEECCSBSCEEECCTT-CEEETTTEEEC-------------------------------------
T ss_pred             CccCcCCCCCCC--CEeEeCCCCeEEECCCC-ccccCCCcccc----------------------ccccCCCCCcC--Ce
Confidence            4555532  343  48999999999999999 98865556666                      88886 36785  79


Q ss_pred             EeeCCCCcEeeCCCCCcCCCC
Q psy9427          91 CIPEDHRPVCHCPVGTHPSPS  111 (324)
Q Consensus        91 C~~~~~~~~C~C~~G~~g~~~  111 (324)
                      |+++.++|.|.|++||++++.
T Consensus        82 C~n~~gsy~C~C~~Gy~~~~d  102 (107)
T 2w2n_E           82 CVNLEGGYKCQCEEGFQLDPH  102 (107)
T ss_dssp             ---------------------
T ss_pred             eecCCCCEEEECCCCceECCC
Confidence            999999999999999998654

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.83  E-value=4.3e-09  Score=96.32  Aligned_cols=80  Identities=25%  Similarity=0.670  Sum_probs=67.8

Q ss_pred             ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCc-ccCCCCCCcCCCCCceeCCCCcccCCCCC---CCCCCCC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECR-QVPCVHNHDCSTSHACDLLSHTCIPACDS---GACGTNA   89 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~-~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~---~~C~~~~   89 (324)
                      +|+|..+||.++++|++..++|+|.|++| |+|.   .|+ +                      +++|..   .+|.+  
T Consensus         5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g-~~g~---~C~~~----------------------~~eC~~~~~~~C~~--   56 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDSIWGYTCTCSPG-YEGS---NCELA----------------------KNECHPERTDGCQH--   56 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCCSSSCCCCCSSS-CCSS---SSCCC----------------------SSSCCTTCTTSCSS--
T ss_pred             CCcCCCCCCCCCCEeECCCCCeEEECCCC-CcCC---ccccC----------------------cccCCCCCCCCCcC--
Confidence            67899999999999999999999999999 9874   454 3                      788875   68875  


Q ss_pred             EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      .|+++.++|.|.|++||++.... ..|.++ ++|
T Consensus        57 ~C~~~~g~~~C~C~~g~~~~~~~-~~C~~~-~~c   88 (317)
T 3h5c_B           57 FCLPGQESYTCSCAQGYRLGEDH-KQCVPH-DQC   88 (317)
T ss_dssp             EEECCSSSCEEECCTTEECCTTS-SCCEEC-SSC
T ss_pred             ccccCCCeeEEeccccccccccc-cccccc-ccc
Confidence            99999999999999999986654 788887 766

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.82  E-value=5.2e-09  Score=104.50  Aligned_cols=140  Identities=21%  Similarity=0.450  Sum_probs=90.4

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC----CCCCCCCEEeeCC
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS----GACGTNAVCIPED   95 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~----~~C~~~~~C~~~~   95 (324)
                      .+|..+|+|..    ..|.|++| |+|.... |...     ..=...     .    ...|..    .+|.++++|+.  
T Consensus       435 ~~Cs~~G~C~~----g~C~C~~G-y~G~~Ce-c~~~-----~~~~~~-----~----~~~C~~~~~~~~Cs~~G~C~~--  492 (687)
T 3k6s_B          435 SLCHGKGFLEC----GICRCDTG-YIGKNCE-CQTQ-----GRSSQE-----L----EGSCRKDNNSIICSGLGDCVC--  492 (687)
T ss_dssp             STGGGSEEESS----SSEEECSS-EESTTSC-EESS-----SCCCSG-----G----GSTTSSSTTSCGGGSSEEEET--
T ss_pred             CCCCCCCEEeC----CEeEcCCC-CcCCccc-ccCC-----cCCccc-----c----CCCCCCCCCCCcCCCCCEEeC--
Confidence            46877888862    37999999 9996443 1110     000000     0    112332    34888899983  


Q ss_pred             CCcEeeCC------CCCcCCCCCCCcccccCCCCCC--CCCCCC--CCeeecCCCCCCCeeeeCCCCCccCCCCCCCC-C
Q psy9427          96 HRPVCHCP------VGTHPSPSPDVHCARESNLCRD--SNPCHP--TARCEDTGATNGKVVCSCPELSVGDPYKTGCV-P  164 (324)
Q Consensus        96 ~~~~C~C~------~G~~g~~~~~~~C~~~~~~C~~--~~~C~~--~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~-~  164 (324)
                        ..|.|+      +||.|     ..|+.....|..  ..+|..  +++|..       .+|.|++||+|..+.  |. +
T Consensus       493 --G~C~C~~~~~~~~G~~G-----~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-------g~C~C~~G~~G~~Ce--c~~~  556 (687)
T 3k6s_B          493 --GQCLCHTSDVPGKLIYG-----QYCECDTINCERYNGQVCGGPGRGLCFC-------GKCRCHPGFEGSACQ--CERT  556 (687)
T ss_dssp             --TEEEECCCCSTTCCEES-----TTSCEESSCSCEETTEETSHHHHEEEET-------TEEEECTTCCSTTSC--SCCS
T ss_pred             --CEEEcCCCCCCCCCccc-----cccccccccccCCCCcCcCCCCCCeEEC-------CEEEcCCCCcCCCCc--cCCC
Confidence              389999      99999     788743377832  236877  889976       289999999998854  32 2


Q ss_pred             CCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCC
Q psy9427         165 QGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVG  219 (324)
Q Consensus       165 ~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~  219 (324)
                      .++|.....                  .+|.++++|+.    ++|.|++||+|..
T Consensus       557 ~~~C~~~~g------------------~~Cs~~G~C~~----g~C~C~~Gy~G~~  589 (687)
T 3k6s_B          557 TEGCLNPRR------------------VECSGRGRCRC----NVCECHSGYQLPL  589 (687)
T ss_dssp             SCTTBCTTC------------------SBTSSSCCBCS----SCBCCSTTCCTTT
T ss_pred             CCCCCCCCC------------------CCCCCCCcCCC----CEEECCCCCcCCC
Confidence            344422110                  15778888986    4799999999843

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.77  E-value=1.8e-08  Score=95.72  Aligned_cols=102  Identities=26%  Similarity=0.611  Sum_probs=70.6

Q ss_pred             CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC----------CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCC
Q psy9427          84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES----------NLCRDSNPCHPTARCEDTGATNGKVVCSCPELS  153 (324)
Q Consensus        84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~----------~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~  153 (324)
                      +|.++++|.+  +.+.|.|++||+|     ..|+...          ++|....+|..++.|..     ++|+|.|++||
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G~~G-----~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~-----~~~~C~C~~G~  271 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPGFMG-----RTCEKACELHTFGRTCKERCSGQEGCKSYVFCLP-----DPYGCSCATGW  271 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTTEES-----TTSCEECCTTEESTTSCEECCSTTTTTTCCEEET-----TTTEEECCBTC
T ss_pred             CCCCCCEEEC--CCCcEeCCCCccC-----CCcccccCCCCCCCCcCccCCCCCCCCCCCEECC-----CCCeEEeCCCc
Confidence            6888899976  5679999999999     6676421          23422446777788853     68999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         154 VGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       154 ~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +|..+...|.+.-    ....|           ..+|  +|.++++|.+..   .|.|++||+|
T Consensus       272 ~G~~C~~~C~~G~----~G~~C-----------~~~C--~C~ngg~C~~~~---~C~C~~G~~G  315 (423)
T 2gy5_A          272 KGLQCNEACHPGF----YGPDC-----------KLRC--SCNNGEMCDRFQ---GCLCSPGWQG  315 (423)
T ss_dssp             BSGGGCBCCCTTB----CSBTT-----------CCBC--CCTTCCEEETTT---EEECCTTCBS
T ss_pred             ccccccCccCCCC----cCCcc-----------cccc--cCCCCCEecCCC---ceECCCCCcC
Confidence            9987644343321    11111           1122  488899998765   3999999998

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.76  E-value=8.7e-09  Score=97.36  Aligned_cols=81  Identities=26%  Similarity=0.539  Sum_probs=66.8

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      |||...++...+.|+++.++|.|.|++||++..  ...|+++ |||....+|.  ..|+|   +.|+|+|.|++||.+..
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~--~~~C~di-deC~~~~~C~--~~C~n---~~g~~~C~C~~g~~~~~   72 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQLDP   72 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS--SSCEEEC-CCCSTTSSCS--SCCBC---CSSSCBCCCCTTCCCCT
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC--CCcccCc-hhhhccCCCC--CccCC---Cccceeeeccccccccc
Confidence            467666766678999999999999999999622  1889988 9996566885  49999   99999999999999887


Q ss_pred             CCCCCCCCC
Q psy9427         158 YKTGCVPQG  166 (324)
Q Consensus       158 ~~~~C~~~~  166 (324)
                      ....|..++
T Consensus        73 ~~~~C~~~~   81 (400)
T 3p5b_L           73 HTKACKAVG   81 (400)
T ss_dssp             TTSSCCCST
T ss_pred             cccceeecc
Confidence            666777654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.62  E-value=1.3e-07  Score=95.61  Aligned_cols=100  Identities=25%  Similarity=0.540  Sum_probs=68.7

Q ss_pred             CCCCCCEEeeCCC--CcEeeCCCCCcCCCCCCCcccccCCCCCCCC-CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCC
Q psy9427          84 ACGTNAVCIPEDH--RPVCHCPVGTHPSPSPDVHCARESNLCRDSN-PCHPTARCEDTGATNGKVVCSCPELSVGDPYKT  160 (324)
Q Consensus        84 ~C~~~~~C~~~~~--~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~-~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~  160 (324)
                      +|.+ +.|+....  .+.+.|+.|+.+..   ..| ++ +||+..+ .|  .+.|++   ++++|+|.|++||++. ...
T Consensus       262 ~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~---~~C-~~-~eC~~~~~~C--~~~C~~---~~~~~~C~C~~G~~~~-~~~  329 (699)
T 1n7d_A          262 KCHS-GECITLDKVCNMARDCRDWSDEPI---KEC-GT-NECLDNNGGC--SHVCND---LKIGYECLCPDGFQLV-AQR  329 (699)
T ss_dssp             CCTT-SCCCCSSCCSCSSCCSSSSCSCCC---SSC-CC-CCTTSSTTTS--CTTCCC---CTTCCCCCCCSSSCCC-SSS
T ss_pred             ecCC-CcEeCCcccccccceecCcccccc---ccc-cc-ccccccccCc--CCCccc---CCCCcEEeCCCCeEcC-CCC
Confidence            4543 55654322  24556777665422   344 33 7783322 45  478999   9999999999999983 346


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         161 GCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       161 ~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|.+++||.. ..                   +|.  ++|+|+.|+|+|.|++||++
T Consensus       330 ~C~dideC~~-~~-------------------~C~--~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          330 RCEDIDECQD-PD-------------------TCS--QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             CCCCCCCCSS-SS-------------------SCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred             cccCccccCC-CC-------------------ccc--cccccCCCCeeeeeeccccc
Confidence            7999999942 22                   353  47999999999999999996

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.58  E-value=5.6e-08  Score=91.82  Aligned_cols=79  Identities=24%  Similarity=0.593  Sum_probs=63.8

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCEEee
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAVCIP   93 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~C~~   93 (324)
                      |+|...++..++.|+++.++|+|.|++| |.+.+...|.+                      ||||. +.+|..  .|++
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G-~~~~~~~~C~d----------------------ideC~~~~~C~~--~C~n   55 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCSQ--LCVN   55 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTT-EEECSSSCEEE----------------------CCCCSTTSSCSS--CCBC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCC-CCcCCCCcccC----------------------chhhhccCCCCC--ccCC
Confidence            4677777777789999999999999999 88654456776                      88886 467864  8999


Q ss_pred             CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          94 EDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        94 ~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.++|.|.|.+||++++.. ..|..+
T Consensus        56 ~~g~~~C~C~~g~~~~~~~-~~C~~~   80 (400)
T 3p5b_L           56 LEGGYKCQCEEGFQLDPHT-KACKAV   80 (400)
T ss_dssp             CSSSCBCCCCTTCCCCTTT-SSCCCS
T ss_pred             Cccceeeeccccccccccc-cceeec
Confidence            9999999999999987654 566544

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.56  E-value=1.9e-07  Score=88.73  Aligned_cols=108  Identities=24%  Similarity=0.633  Sum_probs=72.0

Q ss_pred             CCCCCCEeeeCCCceeeeeCCCeeecCCCCC-CcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCEEeeCCCCc
Q psy9427          21 SCGVNAVCVVNNHEARCFCPPGSYVGDPNIE-CRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAVCIPEDHRP   98 (324)
Q Consensus        21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~-C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~C~~~~~~~   98 (324)
                      ||.++++|.+  +.+.|.|++| |+|..... |...  ..             ...|.++|. .++|.+++.|.  .+.|
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G-~~G~~Ce~~C~~g--~~-------------g~~C~~~C~~~~~C~~~g~C~--~~~~  263 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPG-FMGRTCEKACELH--TF-------------GRTCKERCSGQEGCKSYVFCL--PDPY  263 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTT-EESTTSCEECCTT--EE-------------STTSCEECCSTTTTTTCCEEE--TTTT
T ss_pred             CCCCCCEEEC--CCCcEeCCCC-ccCCCcccccCCC--CC-------------CCCcCccCCCCCCCCCCCEEC--CCCC
Confidence            7888888876  4568999999 88864431 2210  00             012234454 35688888885  5789


Q ss_pred             EeeCCCCCcCCCCCCCccccc------CCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427          99 VCHCPVGTHPSPSPDVHCARE------SNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYK  159 (324)
Q Consensus        99 ~C~C~~G~~g~~~~~~~C~~~------~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~  159 (324)
                      .|.|++||+|     ..|+..      -+.|...-+|.++++|.+   ..   .|.|++||+|..++
T Consensus       264 ~C~C~~G~~G-----~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~---~~---~C~C~~G~~G~~Ce  319 (423)
T 2gy5_A          264 GCSCATGWKG-----LQCNEACHPGFYGPDCKLRCSCNNGEMCDR---FQ---GCLCSPGWQGLQCE  319 (423)
T ss_dssp             EEECCBTCBS-----GGGCBCCCTTBCSBTTCCBCCCTTCCEEET---TT---EEECCTTCBSTTSC
T ss_pred             eEEeCCCccc-----ccccCccCCCCcCCcccccccCCCCCEecC---CC---ceECCCCCcCCCCc
Confidence            9999999999     677541      023422226888999988   43   39999999998753

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.55  E-value=1.2e-08  Score=95.82  Aligned_cols=82  Identities=20%  Similarity=0.436  Sum_probs=21.6

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD  156 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~  156 (324)
                      +|+|..+++...+.|.+..++|.|.|++||++.+.. ..|+++ +||....+|.  ..|++   +.|+|+|.|++||.+.
T Consensus         3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~-~~C~d~-~eC~~~~~C~--~~C~~---~~g~~~C~C~~g~~l~   75 (386)
T 3v65_B            3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDG-RTCQDV-NECAEEGYCS--QGCTN---SEGAFQCWCEAGYELR   75 (386)
T ss_dssp             ---------------------------------------------------CCT--TEEC--------CCEECCTTEEEC
T ss_pred             cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCC-CccCcc-ceeCCcCccc--CcCCC---CCCCCeEEECCCceEc
Confidence            678876665555689999999999999999965433 899888 9995456895  45999   9999999999999976


Q ss_pred             CCCCCCCCC
Q psy9427         157 PYKTGCVPQ  165 (324)
Q Consensus       157 ~~~~~C~~~  165 (324)
                      .....|...
T Consensus        76 ~d~~~C~~~   84 (386)
T 3v65_B           76 PDRRSCKAL   84 (386)
T ss_dssp             TTSSCEEEC
T ss_pred             CCCCeECCc
Confidence            655566544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.51  E-value=2.2e-07  Score=93.97  Aligned_cols=82  Identities=26%  Similarity=0.530  Sum_probs=63.2

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD  156 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~  156 (324)
                      +++|........+.|+++.++|.|.|++||++..  ...|+++ +||+...+|.  ++|+|   +.|+|+|.|++||++.
T Consensus       294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~--~~~C~di-deC~~~~~C~--~~C~n---~~g~y~C~C~~G~~~~  365 (699)
T 1n7d_A          294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQLD  365 (699)
T ss_dssp             CCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCS--SSCCCCC-CCCSSSSSCT--TTCCB---CSSCBCCCCCSSCBCC
T ss_pred             cccccccccCcCCCcccCCCCcEEeCCCCeEcCC--CCcccCc-cccCCCCccc--ccccc---CCCCeeeeeecccccC
Confidence            5566533211235899999999999999999722  1789988 9995566884  69999   9999999999999987


Q ss_pred             CCCCCCCCCC
Q psy9427         157 PYKTGCVPQG  166 (324)
Q Consensus       157 ~~~~~C~~~~  166 (324)
                      .....|..++
T Consensus       366 ~~~~~C~~~~  375 (699)
T 1n7d_A          366 PHTKACKAVG  375 (699)
T ss_dssp             SSCCCCBCCS
T ss_pred             CCCCcccccc
Confidence            7666676553

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.44  E-value=2e-07  Score=93.17  Aligned_cols=152  Identities=28%  Similarity=0.642  Sum_probs=92.5

Q ss_pred             CCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC---------CCCCC---CCCCCCCeeecCCCCCCCeeee
Q psy9427          81 DSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN---------LCRDS---NPCHPTARCEDTGATNGKVVCS  148 (324)
Q Consensus        81 ~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~---------~C~~~---~~C~~~~~C~~~~~~~g~~~C~  148 (324)
                      .+.+|..+++|.    ...|.|++||+|     ..|+-..+         .|...   .+|..++.|+.     |  +|.
T Consensus       433 ~s~~Cs~~G~C~----~g~C~C~~Gy~G-----~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-----G--~C~  496 (687)
T 3k6s_B          433 DRSLCHGKGFLE----CGICRCDTGYIG-----KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----G--QCL  496 (687)
T ss_dssp             CSSTGGGSEEES----SSSEEECSSEES-----TTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-----T--EEE
T ss_pred             CCCCCCCCCEEe----CCEeEcCCCCcC-----CcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-----C--EEE
Confidence            346787778887    357999999999     67762212         47321   24888899976     2  899


Q ss_pred             CC------CCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCC--CCeeeeCCCCceeeCCCCCccCCC
Q psy9427         149 CP------ELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGP--NALCRAVGKRPVCACPDGFSAVGG  220 (324)
Q Consensus       149 C~------~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~--~~~C~~~~g~y~C~C~~Gy~g~~~  220 (324)
                      |+      +||.|..+.  + +...|.....                  .+|.+  +++|..    .+|.|++||+|...
T Consensus       497 C~~~~~~~~G~~G~~Ce--~-~~~~C~~~~~------------------~~C~~~~~G~C~~----g~C~C~~G~~G~~C  551 (687)
T 3k6s_B          497 CHTSDVPGKLIYGQYCE--C-DTINCERYNG------------------QVCGGPGRGLCFC----GKCRCHPGFEGSAC  551 (687)
T ss_dssp             ECCCCSTTCCEESTTSC--E-ESSCSCEETT------------------EETSHHHHEEEET----TEEEECTTCCSTTS
T ss_pred             cCCCCCCCCCccccccc--c-ccccccCCCC------------------cCcCCCCCCeEEC----CEEEcCCCCcCCCC
Confidence            99      999998843  1 3334421100                  14777  788985    27999999998443


Q ss_pred             CCCCCccccCCCCCCC--CccCCCCCcCCCCcccCCCCCCCCCCCCCcccC-CcccCCCCCCCCCC
Q psy9427         221 EARVGCFREMSACAGD--QECLAGEEKCIGGRCRVACLSHSDCSEGERCIS-SLCQSPCTSHSQCP  283 (324)
Q Consensus       221 ~~~~~C~~~~~~C~~~--~~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~-~~C~~~C~~~~~C~  283 (324)
                      .    |......|...  ..|. .+..|+.++|.  |..+   +.|..|.. ..|.++|.+++.|.
T Consensus       552 e----c~~~~~~C~~~~g~~Cs-~~G~C~~g~C~--C~~G---y~G~~Ce~c~~C~~~C~~~g~Cv  607 (687)
T 3k6s_B          552 Q----CERTTEGCLNPRRVECS-GRGRCRCNVCE--CHSG---YQLPLCQECPGCPSPCGKYISCA  607 (687)
T ss_dssp             C----SCCSSCTTBCTTCSBTS-SSCCBCSSCBC--CSTT---CCTTTTCCCTTSCCCCTTTHHHH
T ss_pred             c----cCCCCCCCCCCCCCCCC-CCCcCCCCEEE--CCCC---CcCCCCCCCCCCCcccCCCCCCC
Confidence            3    11112344332  3454 23345555442  3222   55667765 46777787777664

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.44  E-value=3.3e-07  Score=93.67  Aligned_cols=72  Identities=26%  Similarity=0.553  Sum_probs=60.2

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      +.|+++.++|.|.|++||++..  ...|+++ +||....+|  .++|+|   +.|+|+|.|++||.+......|..++++
T Consensus       324 ~~C~~~~~~y~C~C~~Gy~l~~--g~~C~di-deC~~~~~C--~~~C~n---~~gsy~C~C~~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          324 HVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTC--SQLCVN---LEGGYKCQCEEGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             SEEEECSBSEEEECCTTCEEET--TTEEECC-CCCSSSSSC--TTTCCB---CSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred             ccccCCCCCcccCCCCCCccCC--CCccccC-cccCCCCCC--CCeeec---CCCCceeecCCCCEeCCCCceeeecccc
Confidence            5999999999999999998621  1889998 999545567  469999   9999999999999987766778877655

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.30  E-value=2e-07  Score=87.50  Aligned_cols=71  Identities=20%  Similarity=0.441  Sum_probs=14.5

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCee
Q psy9427         121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALC  200 (324)
Q Consensus       121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C  200 (324)
                      ||| ..+++...+.|.+   ..|+|+|.|++||++......|.+++||. ...                   +|.+  .|
T Consensus         4 ~~C-~~~~~~c~~~C~~---~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~-------------------~C~~--~C   57 (386)
T 3v65_B            4 ENC-NVNNGGCAQKCQM---IRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEG-------------------YCSQ--GC   57 (386)
T ss_dssp             ------------------------------------------------------------------------CCTT--EE
T ss_pred             Ccc-cCCCCCCCCCCcC---CCCCcEeECCCCceECCCCCccCccceeC-CcC-------------------cccC--cC
Confidence            888 5555444569998   89999999999999766556799999994 222                   3544  49


Q ss_pred             eeCCCCceeeCCCCCcc
Q psy9427         201 RAVGKRPVCACPDGFSA  217 (324)
Q Consensus       201 ~~~~g~y~C~C~~Gy~g  217 (324)
                      +++.|+|+|.|++||..
T Consensus        58 ~~~~g~~~C~C~~g~~l   74 (386)
T 3v65_B           58 TNSEGAFQCWCEAGYEL   74 (386)
T ss_dssp             C-----CCEECCTTEEE
T ss_pred             CCCCCCCeEEECCCceE
Confidence            99999999999999985

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.11  E-value=2.6e-06  Score=52.56  Aligned_cols=32  Identities=25%  Similarity=0.583  Sum_probs=30.3

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHP  108 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g  108 (324)
                      +++|...||.++++|++..++|.|.|++||+|
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G   34 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG   34 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCCCcC
Confidence            68898899999999999999999999999998

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.10  E-value=3.1e-06  Score=52.19  Aligned_cols=33  Identities=24%  Similarity=0.699  Sum_probs=30.6

Q ss_pred             ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      +|+|..+||.++++|++..++|+|.|++| |+|.
T Consensus         3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G-~~G~   35 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDINSYECWCPFG-FEGK   35 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTT-CCST
T ss_pred             cccCCCCCCCCCCEeEcCCCceEeECCCC-CcCC
Confidence            57899999999999999999999999999 9885

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.03  E-value=3.7e-06  Score=85.95  Aligned_cols=80  Identities=24%  Similarity=0.578  Sum_probs=59.9

Q ss_pred             CCCCCCCCCC-----EeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCE
Q psy9427          17 CDGVSCGVNA-----VCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAV   90 (324)
Q Consensus        17 C~~~~C~~~~-----~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~   90 (324)
                      |..++|..+.     .|+++.++|+|.|++| |.+.+...|.+                      |+||. +.+|.  +.
T Consensus       310 C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~G-y~l~~g~~C~d----------------------ideC~~~~~C~--~~  364 (791)
T 3m0c_C          310 CGTNECLDNNGGCSHVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCS--QL  364 (791)
T ss_dssp             BSCCSTTTGGGGCSSEEEECSBSEEEECCTT-CEEETTTEEEC----------------------CCCCSSSSSCT--TT
T ss_pred             cccccccccccCccccccCCCCCcccCCCCC-CccCCCCcccc----------------------CcccCCCCCCC--Ce
Confidence            4445555433     8999999999999999 87644456666                      88886 34564  58


Q ss_pred             EeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          91 CIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        91 C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      |+++.++|.|.|++||++.+.. ..|..+ ++.
T Consensus       365 C~n~~gsy~C~C~~Gy~l~~~~-~~C~~~-~~~  395 (791)
T 3m0c_C          365 CVNLEGGYKCQCEEGFQLDPHT-KACKAV-GSI  395 (791)
T ss_dssp             CCBCSSCBCCCCCSSEECCSSC-CCCEET-TSC
T ss_pred             eecCCCCceeecCCCCEeCCCC-ceeeec-ccc
Confidence            9999999999999999986654 678766 544

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.91  E-value=8.1e-06  Score=70.31  Aligned_cols=106  Identities=20%  Similarity=0.386  Sum_probs=70.3

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcE
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPV   99 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~   99 (324)
                      ..|..+++|+.    ..|.|++| |+|.... |......  ..+        ....|.......+|..+++|+.    ..
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G-~~G~~Ce-c~~~~~~--~~~--------~~~~C~~~~~~~~Csg~G~C~~----g~  155 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTG-YIGKNCE-CQTQGRS--SQE--------LEGSCRKDNNSIICSGLGDCVC----GQ  155 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTT-EESTTSC-EECCCCC---GG--------GGGGGBSSTTSCBGGGTEEEET----TE
T ss_pred             CccCCCceEEC----CEEECCCC-ccCCccc-ccCcccc--ccc--------CCCcCCCCCCCCCCCCCCEEeC----Cc
Confidence            46888899974    38999999 9996543 2211000  000        0122333333467888899983    47


Q ss_pred             eeCCCC------CcCCCCCCCcccccCCCCCCCC---CCCCC--CeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427         100 CHCPVG------THPSPSPDVHCARESNLCRDSN---PCHPT--ARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus       100 C~C~~G------~~g~~~~~~~C~~~~~~C~~~~---~C~~~--~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                      |.|.+|      |+|     ..|+...+.| ..+   +|..+  ++|..       .+|.|.+||+|..+
T Consensus       156 C~C~~gw~~~~~~~G-----~~Ce~~~~~C-~~~~g~~C~~~~~G~C~~-------g~C~C~~G~~G~~C  212 (217)
T 2p28_B          156 CLCHTSDVPGKLIYG-----QYCECDTINC-ERYNGQVCGGPGRGLCFC-------GKCRCHPGFEGSAC  212 (217)
T ss_dssp             EEECCCCSTTCCEES-----TTSCEESSCS-CEETTEETTCTTTEEEET-------TEEEECTTEESTTS
T ss_pred             eECCCCCCCcccEEC-----CCcccCCccC-CCCCCCCCCCCCCcEEeC-------CeeECCCCCccCCc
Confidence            999999      567     7887433678 433   68777  89976       28999999999874

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.90  E-value=7.1e-06  Score=54.60  Aligned_cols=38  Identities=18%  Similarity=0.444  Sum_probs=32.4

Q ss_pred             cCCCCCCCCCCCCEEe-----eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          77 IPACDSGACGTNAVCI-----PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +|+|.++||.++++|+     +..++|.|.|++||+|     ..|+..
T Consensus         8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G-----~~CE~~   50 (55)
T 3u7u_G            8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTG-----DRCQNY   50 (55)
T ss_dssp             CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEES-----TTSCEE
T ss_pred             CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcC-----CCcCcc
Confidence            8999999999999995     5567999999999999     788754

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.89  E-value=1.4e-05  Score=53.12  Aligned_cols=35  Identities=23%  Similarity=0.462  Sum_probs=29.2

Q ss_pred             ccccCCCCCCCCCCCEee-----eCCCceeeeeCCCeeecC
Q psy9427          12 TCWNSCDGVSCGVNAVCV-----VNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        12 ~c~~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~y~g~   47 (324)
                      .-+|+|+++||.++|+|.     +..++|+|.|++| |+|.
T Consensus         6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g-~~G~   45 (55)
T 3u7u_G            6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNE-FTGD   45 (55)
T ss_dssp             EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTT-EEST
T ss_pred             ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCC-CcCC
Confidence            346889999999999994     5678999999999 9995

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.82  E-value=3.1e-05  Score=51.11  Aligned_cols=38  Identities=26%  Similarity=0.657  Sum_probs=33.2

Q ss_pred             cCCCCCC---CCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          77 IPACDSG---ACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        77 i~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      |++|.+.   ||.++++|+  +..++|.|.|++||+|     ..|+..
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G-----~~Ce~~   45 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSG-----DRCQTR   45 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCS-----SSSCCC
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcC-----CcCCcc
Confidence            7888876   999999999  7889999999999999     778653

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.80  E-value=2.7e-06  Score=57.90  Aligned_cols=41  Identities=24%  Similarity=0.651  Sum_probs=34.8

Q ss_pred             cCCCCCCCCCCC--CEEeeCCCCcEeeCCCCCc-CCCCCCCcccccCCCC
Q psy9427          77 IPACDSGACGTN--AVCIPEDHRPVCHCPVGTH-PSPSPDVHCARESNLC  123 (324)
Q Consensus        77 i~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~~-g~~~~~~~C~~~~~~C  123 (324)
                      +|+|.++||.++  ++|++..++|.|.|++||+ |     ..|++. ++|
T Consensus        11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G-----~~C~~~-~~C   54 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRIS-----LDGTGN-VTC   54 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEE-----ECSSSC-EEE
T ss_pred             CCcCcCCCCcCCCccccccCCCceEeECCCCCccC-----CCCCCC-CEe
Confidence            688888999988  7999999999999999999 8     667654 444

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.74  E-value=2.7e-05  Score=49.55  Aligned_cols=36  Identities=19%  Similarity=0.414  Sum_probs=30.0

Q ss_pred             CCCCC---CCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          79 ACDSG---ACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        79 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +|.+.   ||.++++|+  +..++|+|.|++||+|     ..|+..
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G-----~~Ce~~   42 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSG-----DRCQTR   42 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEET-----TTTCEE
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcC-----CcCCcc
Confidence            45555   899999998  6778999999999999     778653

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.73  E-value=8.3e-06  Score=55.48  Aligned_cols=37  Identities=24%  Similarity=0.489  Sum_probs=32.2

Q ss_pred             CcccccCCCCCCCCCC--CEeeeCCCceeeeeCCCeee-cC
Q psy9427          10 TLTCWNSCDGVSCGVN--AVCVVNNHEARCFCPPGSYV-GD   47 (324)
Q Consensus        10 ~~~c~~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~y~-g~   47 (324)
                      +.+-+|+|..+||.++  ++|++..++|+|.|++| |+ |.
T Consensus         7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~G-y~~G~   46 (61)
T 2k2s_B            7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQG-YRISL   46 (61)
T ss_dssp             CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTT-EEEEE
T ss_pred             hcCCCCcCcCCCCcCCCccccccCCCceEeECCCC-CccCC
Confidence            3455688989999998  79999999999999999 98 84

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.60  E-value=5e-05  Score=50.07  Aligned_cols=34  Identities=29%  Similarity=0.674  Sum_probs=30.0

Q ss_pred             cccCCCCC---CCCCCCEee--eCCCceeeeeCCCeeecC
Q psy9427          13 CWNSCDGV---SCGVNAVCV--VNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        13 c~~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~y~g~   47 (324)
                      .+++|..+   ||.++|+|+  +..++|+|.|++| |+|.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G-~~G~   40 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIG-YSGD   40 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTT-CCSS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCC-CcCC
Confidence            46788876   999999999  7889999999999 9885

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.57  E-value=2.7e-05  Score=53.34  Aligned_cols=41  Identities=17%  Similarity=0.443  Sum_probs=33.9

Q ss_pred             CCCCCCCCCCCCEEee-----CCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          78 PACDSGACGTNAVCIP-----EDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      ++|..+||.++++|++     ..++|.|.|++||+|     ..|+..++++
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G-----~~Ce~~i~~~   52 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTG-----ARCTENVPMK   52 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEES-----TTSCEECCSS
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcC-----CccCcCcCcc
Confidence            5666789999999996     668999999999999     8897544776

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.54  E-value=0.0001  Score=46.76  Aligned_cols=31  Identities=26%  Similarity=0.453  Sum_probs=27.0

Q ss_pred             CCCCC---CCCCCCEee--eCCCceeeeeCCCeeecC
Q psy9427          16 SCDGV---SCGVNAVCV--VNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        16 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~y~g~   47 (324)
                      +|..+   ||.++|+|+  +..++|+|.|++| |+|.
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G-~~G~   37 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIG-YSGD   37 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTT-EETT
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCC-CcCC
Confidence            56666   999999998  6778999999999 9985

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.48  E-value=5.2e-05  Score=65.25  Aligned_cols=93  Identities=26%  Similarity=0.583  Sum_probs=62.8

Q ss_pred             CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC---------CCCC---CCCCCCCCeeecCCCCCCCeeeeCC
Q psy9427          83 GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN---------LCRD---SNPCHPTARCEDTGATNGKVVCSCP  150 (324)
Q Consensus        83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~---------~C~~---~~~C~~~~~C~~~~~~~g~~~C~C~  150 (324)
                      ..|..+++|+.    ..|.|.+||+|     ..|+-..+         .|..   ..+|..+++|+.       .+|+|.
T Consensus        96 ~~Csg~G~C~~----g~C~C~~G~~G-----~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-------g~C~C~  159 (217)
T 2p28_B           96 SLCHGKGFLEC----GICRCDTGYIG-----KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-------GQCLCH  159 (217)
T ss_dssp             CTTTTSEEEET----TEEEECTTEES-----TTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-------TEEEEC
T ss_pred             CccCCCceEEC----CEEECCCCccC-----CcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-------CceECC
Confidence            45878889974    58999999999     66652212         3532   346888889976       379999


Q ss_pred             CCC------ccCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCC--CeeeeCCCCceeeCCCCCcc
Q psy9427         151 ELS------VGDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPN--ALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       151 ~G~------~g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~--~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +||      +|..    |. +..+|.....                  .+|..+  ++|..    .+|.|.+||+|
T Consensus       160 ~gw~~~~~~~G~~----Ce~~~~~C~~~~g------------------~~C~~~~~G~C~~----g~C~C~~G~~G  209 (217)
T 2p28_B          160 TSDVPGKLIYGQY----CECDTINCERYNG------------------QVCGGPGRGLCFC----GKCRCHPGFEG  209 (217)
T ss_dssp             CCCSTTCCEESTT----SCEESSCSCEETT------------------EETTCTTTEEEET----TEEEECTTEES
T ss_pred             CCCCCcccEECCC----cccCCccCCCCCC------------------CCCCCCCCcEEeC----CeeECCCCCcc
Confidence            994      6665    43 2334421100                  147666  89985    28999999998

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.45  E-value=7.5e-05  Score=49.63  Aligned_cols=42  Identities=24%  Similarity=0.552  Sum_probs=33.3

Q ss_pred             CCCCC--CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          78 PACDS--GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        78 ~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      |||..  ..|.  +.|+|+.++|.|.|++||++.+.. ..|+++ ++|
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~-~~C~di-dec   45 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNG-KACIPT-GPY   45 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTS-SCEEES-SSS
T ss_pred             ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCC-CeeccC-ccc
Confidence            45643  3464  589999999999999999975554 789998 888

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.42  E-value=0.00011  Score=71.76  Aligned_cols=99  Identities=18%  Similarity=0.389  Sum_probs=34.3

Q ss_pred             CcEe-eCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCC-CCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCC
Q psy9427          97 RPVC-HCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTG-ATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDAD  174 (324)
Q Consensus        97 ~~~C-~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~-~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~  174 (324)
                      ++.| .|++||.|     ..+... +.| ...+|...+.|.+.. .....+.|.|++||+|..+. .|.+.-.- ...  
T Consensus       417 G~~C~~C~~Gy~G-----~~c~~~-~~C-~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g-~~~--  485 (525)
T 4aqs_A          417 GERCDVCKEGFYD-----LSAEDP-YGC-KSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWG-LSN--  485 (525)
T ss_dssp             TTTTCEECTTEEC-----CCTTST-TSS-EECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C-------------
T ss_pred             CCcccCCCCCCcC-----CCCCCC-CCC-ccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccC-CCC--
Confidence            4455 68888887     444444 455 444565555554310 01245689999999998853 23321100 000  


Q ss_pred             CCCCCcccCCcccCCCcc-CCCCCCeeeeC--CCCceeeCCCCCcc
Q psy9427         175 CPPSSRCSGGQCVSVCQG-ACGPNALCRAV--GKRPVCACPDGFSA  217 (324)
Q Consensus       175 C~~~~~C~~~~C~d~C~~-~C~~~~~C~~~--~g~y~C~C~~Gy~g  217 (324)
                                 -++.|.. +|.+++.+...  ...++|.|++||+|
T Consensus       486 -----------~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G  520 (525)
T 4aqs_A          486 -----------DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIG  520 (525)
T ss_dssp             ----------------------------------------------
T ss_pred             -----------CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcC
Confidence                       0222333 46666555433  23458999999998

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.32  E-value=7.1e-05  Score=49.76  Aligned_cols=44  Identities=30%  Similarity=0.692  Sum_probs=34.9

Q ss_pred             CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427         121 NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP  169 (324)
Q Consensus       121 ~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~  169 (324)
                      |||+.. ..|.  +.|+|   ++|+|+|.|++||++......|.+++||.
T Consensus         2 dEC~~~~~~C~--~~C~n---t~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHE---EQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             CCTTTGGGGCS--SEEEE---ETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ccccCCCCCcC--cEeEc---CCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            667332 2573  59999   99999999999999777667899999883

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=97.29  E-value=0.00025  Score=52.40  Aligned_cols=67  Identities=24%  Similarity=0.666  Sum_probs=53.0

Q ss_pred             CCCCCCCCEEee-CCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCCC-CCCCCCeeecCCCCC-----CCeeeeCCCCC
Q psy9427          82 SGACGTNAVCIP-EDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDSN-PCHPTARCEDTGATN-----GKVVCSCPELS  153 (324)
Q Consensus        82 ~~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~~-~C~~~~~C~~~~~~~-----g~~~C~C~~G~  153 (324)
                      ...|..+|.|.+ .++...|+|.+||.+++   ..|..+. ..|+..+ -|..+|+|..   +.     +..+|+|.+||
T Consensus         9 ~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg---~~Cv~~~~~sC~~nNGGCd~nA~C~~---~~~~~~~~ki~C~C~~g~   82 (99)
T 1ob1_C            9 KKQCPQNSGCFRHLDEREECKCLLNYKQEG---DKCVENPNPTCNENNGGCDADAKCTE---EDSGSNGKKITCECTKPD   82 (99)
T ss_dssp             SCCCCTTEEEECCTTSCCEEEECTTEEEET---TEEEECSCCCSTTGGGGCCTTEEEEC---CSCSSSSCCCEEEECSTT
T ss_pred             cCCCCCCCCeEEcCCCCEEEEecCCeecCC---CeEeeCCCCChhhcCCCcCCCceeEe---cCCcccCCceEeEeCCCC
Confidence            356778999987 57889999999999977   6788762 4674332 5999999997   53     67999999997


Q ss_pred             c
Q psy9427         154 V  154 (324)
Q Consensus       154 ~  154 (324)
                      .
T Consensus        83 ~   83 (99)
T 1ob1_C           83 S   83 (99)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.27  E-value=0.00013  Score=46.55  Aligned_cols=36  Identities=36%  Similarity=0.736  Sum_probs=29.8

Q ss_pred             cCCCCC---CCCCCCCEEeeCC--CCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDS---GACGTNAVCIPED--HRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      |++|.+   +||.+ ++|+...  ++|.|.|++||+|     ..|+.
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG-----~~Ce~   43 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTG-----VRCEH   43 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSS-----TTSCC
T ss_pred             cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCcc-----CCCCc
Confidence            677876   89988 7999754  6899999999999     77764

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.25  E-value=0.00021  Score=46.78  Aligned_cols=32  Identities=22%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427         127 NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV  163 (324)
Q Consensus       127 ~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~  163 (324)
                      .+|.  ++|+|   ++|+|+|.|++||++......|.
T Consensus        20 ~~C~--~~C~n---~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A           20 PQCQ--HLCHN---YVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CTTS--SEEEE---ETTEEEEECSTTCEECTTSSCEE
T ss_pred             CCCC--CEeEC---CCCCeEEECCCCCeECCCCCccC
Confidence            5784  69999   99999999999999876544453

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.22  E-value=0.00012  Score=50.05  Aligned_cols=32  Identities=25%  Similarity=0.604  Sum_probs=27.8

Q ss_pred             cCCCCCCCCCCCEeee-----CCCceeeeeCCCeeecC
Q psy9427          15 NSCDGVSCGVNAVCVV-----NNHEARCFCPPGSYVGD   47 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~y~g~   47 (324)
                      ++|..+||.++|+|++     ..++|+|.|++| |+|.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~G-f~G~   43 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG-FTGA   43 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTT-EEST
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCC-CcCC
Confidence            4677789999999996     678999999999 9985

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=97.21  E-value=0.0007  Score=50.38  Aligned_cols=65  Identities=25%  Similarity=0.543  Sum_probs=53.8

Q ss_pred             CCCCCCCEEee-CCCCcEeeCCCCCcCCCCCCCcccccCCC-CCCCC-CCCCCCeeecCCCC-CCCeeeeCCCCCc
Q psy9427          83 GACGTNAVCIP-EDHRPVCHCPVGTHPSPSPDVHCARESNL-CRDSN-PCHPTARCEDTGAT-NGKVVCSCPELSV  154 (324)
Q Consensus        83 ~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~~~C~~~~~~-C~~~~-~C~~~~~C~~~~~~-~g~~~C~C~~G~~  154 (324)
                      ..|..+|.|.. .++...|+|..||.+++   ..|..+ +. |+..+ -|+.+|.|..   + +....|.|..+|.
T Consensus        16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg---~~Cv~~-Np~C~~nNGGCd~nAeC~~---~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           16 TNVPENAACYRYLDGTEEWRCLLGFKEVG---GKCVPA-SITCEENNGGCAPEAECTM---DDKKEVECKCTKEGS   84 (105)
T ss_dssp             SCCCTTEEEEECTTSCEEEEECTTEEECS---SSEEEC-CCCTTSGGGGSCTTSEEEE---CTTSCEEEECCSTTC
T ss_pred             CCCCCCCCeEECCCCCEeEEEECCeeccC---CEEEEC-CcchhhcCCCcCCCcEeEE---CCCCEEEeECCCCCC
Confidence            45778899997 78889999999999987   789988 77 73333 5999999998   5 4789999999974

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.17  E-value=0.00026  Score=45.13  Aligned_cols=32  Identities=25%  Similarity=0.557  Sum_probs=27.0

Q ss_pred             ccCCCC---CCCCCCCEeeeCC--CceeeeeCCCeeecC
Q psy9427          14 WNSCDG---VSCGVNAVCVVNN--HEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~y~g~   47 (324)
                      +++|..   +||.+ ++|+...  ++|+|.|++| |+|.
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~G-ytG~   39 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVG-YTGV   39 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTT-CSST
T ss_pred             cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCC-CccC
Confidence            567887   89998 7998744  6899999999 9995

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.12  E-value=6.2e-05  Score=49.43  Aligned_cols=31  Identities=23%  Similarity=0.489  Sum_probs=25.0

Q ss_pred             CCCCCCCEEee----CCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          83 GACGTNAVCIP----EDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        83 ~~C~~~~~C~~----~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      +||.++++|++    ..++|.|.|++||+|     ..|+.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G-----~~Ce~   48 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFMG-----QRCEY   48 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEES-----TTSCE
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCcC-----CCCcc
Confidence            46778889986    356899999999999     77764

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.11  E-value=0.00036  Score=45.66  Aligned_cols=32  Identities=19%  Similarity=0.401  Sum_probs=25.5

Q ss_pred             CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          83 GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      .+|.  ++|+++.++|.|.|++||++.... +.|.
T Consensus        20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~-~~C~   51 (53)
T 1apq_A           20 PQCQ--HLCHNYVGGYFCSCRPGYELQEDR-HSCQ   51 (53)
T ss_dssp             CTTS--SEEEEETTEEEEECSTTCEECTTS-SCEE
T ss_pred             CCCC--CEeECCCCCeEEECCCCCeECCCC-CccC
Confidence            4675  599999999999999999986543 5554

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.07  E-value=0.00039  Score=48.73  Aligned_cols=25  Identities=16%  Similarity=0.207  Sum_probs=21.1

Q ss_pred             CCCCCCeeeeCCCCceee-CCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCA-CPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~-C~~Gy~g  217 (324)
                      +|..+++|+|+.|+|+|. ++.||++
T Consensus        12 ~C~~~~~C~Nt~Gsy~C~~~~~g~~~   37 (71)
T 2kl7_A           12 ACKGEMKCINHYGGYLCLPRSAAVIN   37 (71)
T ss_dssp             SCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred             CCCCCCEeECCCCCeEecccCCcccc
Confidence            477788999999999998 5678875

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.03  E-value=0.00068  Score=55.51  Aligned_cols=33  Identities=27%  Similarity=0.685  Sum_probs=26.2

Q ss_pred             CCCCCCEeeeCC--Cceee-eeCCCeeecCCCCCCcc
Q psy9427          21 SCGVNAVCVVNN--HEARC-FCPPGSYVGDPNIECRQ   54 (324)
Q Consensus        21 ~C~~~~~C~~~~--~~~~C-~C~~G~y~g~~~~~C~~   54 (324)
                      ||.++++|....  +.++| .|++| |+|.....|.+
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g-~~G~~Ce~C~~   37 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTG-TAGKRCELCDD   37 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTT-EESTTSCEECT
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCC-CcCCCCcCCCC
Confidence            688899998765  67899 79999 99976665554

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.98  E-value=0.00025  Score=49.39  Aligned_cols=45  Identities=27%  Similarity=0.530  Sum_probs=36.2

Q ss_pred             ccCCCCCCCC-CCCCCCeeecCCCCCC-CeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         118 RESNLCRDSN-PCHPTARCEDTGATNG-KVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       118 ~~~~~C~~~~-~C~~~~~C~~~~~~~g-~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ++ ++|+..+ .|  ...|++   ++| +|+|.|++||.+....+.|.+++||
T Consensus         4 d~-~eC~~~nggC--~h~C~n---~~g~s~~C~C~~Gy~L~~D~~tC~d~dec   50 (69)
T 1kli_L            4 DQ-LICVNENGGC--EQYCSD---HTGTKRSCRCHEGYSLLADGVSCTPTVEY   50 (69)
T ss_dssp             CC-CCTTSGGGGC--SSEEEE---ETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             cc-ccccCCCCCc--CCEeEc---CCCCCEEEeCCCCCeECCCCCcccCcccc
Confidence            44 8884333 46  568999   898 8999999999987777889999987

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.95  E-value=0.0005  Score=47.84  Aligned_cols=43  Identities=19%  Similarity=0.397  Sum_probs=34.1

Q ss_pred             cCCCCCC--CCCCCCEEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          77 IPACDSG--ACGTNAVCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        77 i~~C~~~--~C~~~~~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      +++|...  .|.  ..|+++.+ +|.|.|++||.+.+.. ++|.++ +++
T Consensus         5 ~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~-~tC~d~-dec   50 (69)
T 1kli_L            5 QLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VEY   50 (69)
T ss_dssp             CCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTS-SCEEEC-SSS
T ss_pred             cccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCC-CcccCc-ccc
Confidence            6677543  353  58999998 8999999999976654 899998 887

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.91  E-value=0.0034  Score=46.67  Aligned_cols=68  Identities=22%  Similarity=0.483  Sum_probs=53.0

Q ss_pred             CCCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCC-CCC--CCCCCCCEE
Q psy9427          16 SCDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPA-CDS--GACGTNAVC   91 (324)
Q Consensus        16 ~C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~-C~~--~~C~~~~~C   91 (324)
                      .|....|..||.|.. .+|...|.|..| |+++. ..|..                      +++ |..  +-|..+|.|
T Consensus        12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~g-Y~~dg-~~Cv~----------------------~Np~C~~nNGGCd~nAeC   67 (105)
T 1n1i_A           12 KCIDTNVPENAACYRYLDGTEEWRCLLG-FKEVG-GKCVP----------------------ASITCEENNGGCAPEAEC   67 (105)
T ss_dssp             SCCSSCCCTTEEEEECTTSCEEEEECTT-EEECS-SSEEE----------------------CCCCTTSGGGGSCTTSEE
T ss_pred             EecCCCCCCCCCeEECCCCCEeEEEECC-eeccC-CEEEE----------------------CCcchhhcCCCcCCCcEe
Confidence            355556889999997 789999999999 99863 34665                      444 432  348889999


Q ss_pred             eeCC-CCcEeeCCCCCc
Q psy9427          92 IPED-HRPVCHCPVGTH  107 (324)
Q Consensus        92 ~~~~-~~~~C~C~~G~~  107 (324)
                      +.+. ..-.|.|..+|.
T Consensus        68 ~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           68 TMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             EECTTSCEEEECCSTTC
T ss_pred             EECCCCEEEeECCCCCC
Confidence            9885 789999999975

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.90  E-value=0.0015  Score=48.29  Aligned_cols=69  Identities=28%  Similarity=0.689  Sum_probs=51.6

Q ss_pred             CCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCCCEEee
Q psy9427          17 CDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTNAVCIP   93 (324)
Q Consensus        17 C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~~~C~~   93 (324)
                      |....|..||.|.. .++...|.|.+| |+++. ..|..++                    .+.|..  +-|..+|.|+.
T Consensus         7 C~~~~C~~NA~C~r~~~g~e~C~C~~g-y~gdg-~~Cv~~~--------------------~~sC~~nNGGCd~nA~C~~   64 (99)
T 1ob1_C            7 CVKKQCPQNSGCFRHLDEREECKCLLN-YKQEG-DKCVENP--------------------NPTCNENNGGCDADAKCTE   64 (99)
T ss_dssp             CCSCCCCTTEEEECCTTSCCEEEECTT-EEEET-TEEEECS--------------------CCCSTTGGGGCCTTEEEEC
T ss_pred             eccCCCCCCCCeEEcCCCCEEEEecCC-eecCC-CeEeeCC--------------------CCChhhcCCCcCCCceeEe
Confidence            55556889999987 589999999999 99864 3455510                    135543  44888999997


Q ss_pred             CC-----CCcEeeCCCCCc
Q psy9427          94 ED-----HRPVCHCPVGTH  107 (324)
Q Consensus        94 ~~-----~~~~C~C~~G~~  107 (324)
                      +.     +...|.|.+||.
T Consensus        65 ~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           65 EDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CSCSSSSCCCEEEECSTTC
T ss_pred             cCCcccCCceEeEeCCCCc
Confidence            65     679999999986

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.90  E-value=0.00073  Score=47.31  Aligned_cols=33  Identities=18%  Similarity=0.383  Sum_probs=26.1

Q ss_pred             ccCCCC--CCCCCCCEeeeCCCceeee-eCCCeeecC
Q psy9427          14 WNSCDG--VSCGVNAVCVVNNHEARCF-CPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~--~~C~~~~~C~~~~~~~~C~-C~~G~y~g~   47 (324)
                      +|+|..  ++|..+++|+|+.++|+|. +..| |.++
T Consensus         3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g-~~~~   38 (71)
T 2kl7_A            3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAA-VIND   38 (71)
T ss_dssp             SCCTTCCCCSCTTEEEEEETTCCEEEEETTSC-CCSC
T ss_pred             cccccCCCCCCCCCCEeECCCCCeEecccCCc-cccc
Confidence            677864  5799889999999999998 4456 6654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.84  E-value=0.00016  Score=69.45  Aligned_cols=62  Identities=23%  Similarity=0.616  Sum_probs=25.3

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD  156 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~  156 (324)
                      +++|.. +|.+ ++|+..   +.|.|++||+|     ..|+ + ++| .. +|.++++|++   .   ++|.|++||+|.
T Consensus       392 ~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G-----~~C~-~-~~C-~~-~C~~~g~C~~---~---~~C~C~~G~~G~  451 (463)
T 2wg3_C          392 TSECSR-LCRN-GYCTPT---GKCCCSPGWEG-----DFCR-T-AKC-EP-ACRHGGVCVR---P---NKCLCKKGYLGP  451 (463)
T ss_dssp             CCHHHH-HCCS-EEECTT---SCEEECTTEES-----TTSC-E-ECC---------------------------------
T ss_pred             cccccC-CCCC-CccCCC---CeECCCCCcCC-----CcCC-c-CcC-CC-CCCCCCEECC---C---CEEECCCCcccC
Confidence            445542 5775 789753   48999999999     7885 3 678 44 8998999987   4   799999999998


Q ss_pred             CC
Q psy9427         157 PY  158 (324)
Q Consensus       157 ~~  158 (324)
                      .+
T Consensus       452 ~C  453 (463)
T 2wg3_C          452 QC  453 (463)
T ss_dssp             --
T ss_pred             CC
Confidence            74

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.84  E-value=0.00047  Score=44.93  Aligned_cols=33  Identities=18%  Similarity=0.381  Sum_probs=28.2

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      +.|+++.++|+|.|++||++.+.. ++|+++ +|+
T Consensus        10 ~~C~n~~gs~~C~C~~Gy~L~~d~-~tC~di-de~   42 (51)
T 1kig_L           10 QFCREERSEVRCSCAHGYVLGDDS-KSCVST-ERF   42 (51)
T ss_dssp             SCCCEETTEECCCCCTTEEECTTS-SCEEEC-SSS
T ss_pred             CEeEcCCCCeEEeCCCCcEECCCC-CccccC-Ccc
Confidence            479999999999999999965544 889998 877

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.81  E-value=0.00045  Score=67.34  Aligned_cols=55  Identities=16%  Similarity=0.401  Sum_probs=12.1

Q ss_pred             CcEeeCCCCCcCCCCCCCcccc----------cCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427          97 RPVCHCPVGTHPSPSPDVHCAR----------ESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY  158 (324)
Q Consensus        97 ~~~C~C~~G~~g~~~~~~~C~~----------~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~  158 (324)
                      .+.|.|++||+|     ..|+.          .++.| .+.+|..++.+... .....++|+|++||+|..+
T Consensus       459 tg~C~C~~g~~G-----~~Ce~C~~G~~g~~~~~~~C-~~C~C~~~gs~~~~-C~~~tG~C~C~~G~~G~~C  523 (525)
T 4aqs_A          459 TGYCYCKRLVTG-----QRCDQCLPQHWGLSNDLDGC-RPCDCDLGGALNNS-CSEDSGQCSCLPHMIGRQC  523 (525)
T ss_dssp             TCCBCBCTTCCS-----TTTCC--------------------------------------------------
T ss_pred             CCEEECCCCCcC-----CCcccCCCCccCCCCCCCCC-cCCCCCCCCccCCc-cCCCCCeeECCCCCcCCCC
Confidence            457889999988     55531          12556 55577666655430 0123458999999999863

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.77  E-value=0.00047  Score=56.12  Aligned_cols=41  Identities=17%  Similarity=0.378  Sum_probs=36.9

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      +++|...+|.++++|++..++|.|.|++||.|     ..|+.+ ++|
T Consensus       119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G-----~~Ce~~-~~c  159 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYG-----PECEYV-RDD  159 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECSSSEEEEECTTEES-----TTSCEE-CC-
T ss_pred             eCCCcCCCCCCCCEEecCCCCceEeCCCCCcC-----cccccC-ccc
Confidence            67888889999999999999999999999999     889988 788

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.62  E-value=0.0006  Score=44.42  Aligned_cols=34  Identities=24%  Similarity=0.446  Sum_probs=29.6

Q ss_pred             CCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      .+.|+|   ++|+|+|.|++||++......|.+++|+
T Consensus         9 ~~~C~n---~~gs~~C~C~~Gy~L~~d~~tC~dide~   42 (51)
T 1kig_L            9 DQFCRE---ERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSCCCE---ETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             CCEeEc---CCCCeEEeCCCCcEECCCCCccccCCcc
Confidence            357999   9999999999999987766789999887

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.61  E-value=0.0014  Score=43.05  Aligned_cols=29  Identities=28%  Similarity=0.633  Sum_probs=25.1

Q ss_pred             CCCCCCCCEee--eCCCceeeeeCCCeeecCC
Q psy9427          19 GVSCGVNAVCV--VNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        19 ~~~C~~~~~C~--~~~~~~~C~C~~G~y~g~~   48 (324)
                      .+||.++++|+  +..++|+|.|++| |+|..
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~G-ytG~~   41 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVG-YIGER   41 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTT-EESTT
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCC-CcCCC
Confidence            46899999998  5678899999999 99953

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.53  E-value=0.00057  Score=60.65  Aligned_cols=42  Identities=19%  Similarity=0.411  Sum_probs=35.2

Q ss_pred             cCCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCC
Q psy9427          77 IPACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNL  122 (324)
Q Consensus        77 i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~  122 (324)
                      +|||.  ..+|..++.|+|+.++|.|.|++||.|++   ..|.++ |+
T Consensus         5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG---~~C~d~-d~   48 (285)
T 1gl4_A            5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG---RQCVAE-GS   48 (285)
T ss_dssp             --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS---SSEEET-TC
T ss_pred             chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC---CcCCCC-CC
Confidence            78886  46899899999999999999999999887   789887 54

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.52  E-value=0.0009  Score=43.95  Aligned_cols=34  Identities=26%  Similarity=0.439  Sum_probs=29.9

Q ss_pred             CCeeecCCCCCC-CeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNG-KVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       132 ~~~C~~~~~~~g-~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ...|++   +++ +|+|.|++||++....+.|.+++||
T Consensus        10 ~~~C~n---~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec   44 (53)
T 2bz6_L           10 EQYCSD---HTGTKRSCRCHEGYSLLADGVSCTPTVEY   44 (53)
T ss_dssp             SSEEEE---ETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred             CCEeEc---CCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence            467999   898 7999999999987767789999988

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.51  E-value=0.0016  Score=42.75  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=28.5

Q ss_pred             CEEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          89 AVCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        89 ~~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      ..|+++.+ +|+|.|++||++.+.. ++|+++ +||
T Consensus        11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg-~tC~d~-dec   44 (53)
T 2bz6_L           11 QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VEY   44 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTS-SCEEEC-SSS
T ss_pred             CEeEcCCCCCEEeeCCCCCEECCCC-CcccCC-ccc
Confidence            57999998 7999999999976554 899998 888

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.37  E-value=0.00061  Score=60.49  Aligned_cols=45  Identities=24%  Similarity=0.603  Sum_probs=35.1

Q ss_pred             ccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         118 RESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       118 ~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ++ |||+. ..+|+.++.|+|   +.|+|+|.|++||.|++  ..|.++++-
T Consensus         4 Di-DEC~~~~~~C~~~a~C~N---t~Gsy~C~C~~Gy~GnG--~~C~d~d~P   49 (285)
T 1gl4_A            4 AQ-QTCANNRHQCSVHAECRD---YATGFCCRCVANYTGNG--RQCVAEGSP   49 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEE---CSSCEEEEECTTEEECS--SSEEETTCE
T ss_pred             cc-hhccCCCCCCCCCCEeEc---CCCCeEEEcCCCCCCCC--CcCCCCCCC
Confidence            45 88832 358999999999   99999999999999987  358887653

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.26  E-value=0.0044  Score=50.63  Aligned_cols=25  Identities=36%  Similarity=0.813  Sum_probs=19.4

Q ss_pred             CCCCCCEEeeCC--CCcEe-eCCCCCcC
Q psy9427          84 ACGTNAVCIPED--HRPVC-HCPVGTHP  108 (324)
Q Consensus        84 ~C~~~~~C~~~~--~~~~C-~C~~G~~g  108 (324)
                      ||.++++|....  +.++| .|++||+|
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G   29 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTGTAG   29 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTTEES
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCCCcC
Confidence            466778888655  56889 69999988

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.26  E-value=0.0014  Score=43.01  Aligned_cols=33  Identities=27%  Similarity=0.634  Sum_probs=27.8

Q ss_pred             CCCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          82 SGACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        82 ~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      .+||.++++|+  +..++|.|.|++||+|     ..|+..
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG-----~~Ce~~   45 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYIG-----ERCQYR   45 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEES-----TTSCEE
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCcC-----CCCCcC
Confidence            46898999998  5678899999999999     778643

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.21  E-value=0.0016  Score=62.38  Aligned_cols=59  Identities=32%  Similarity=0.867  Sum_probs=18.2

Q ss_pred             CCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEe
Q psy9427          21 SCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVC  100 (324)
Q Consensus        21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C  100 (324)
                      +|.+ ++|+..   ++|.|++| |+|..   |.                       +++|.+ +|.++++|++.   +.|
T Consensus       398 ~C~n-G~C~~~---~~C~C~~G-~~G~~---C~-----------------------~~~C~~-~C~~~g~C~~~---~~C  442 (463)
T 2wg3_C          398 LCRN-GYCTPT---GKCCCSPG-WEGDF---CR-----------------------TAKCEP-ACRHGGVCVRP---NKC  442 (463)
T ss_dssp             HCCS-EEECTT---SCEEECTT-EESTT---SC-----------------------EECC--------------------
T ss_pred             CCCC-CccCCC---CeECCCCC-cCCCc---CC-----------------------cCcCCC-CCCCCCEECCC---CEE
Confidence            4664 678643   36888888 87753   22                       456764 88888999865   689


Q ss_pred             eCCCCCcCCCCCCCccccc
Q psy9427         101 HCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus       101 ~C~~G~~g~~~~~~~C~~~  119 (324)
                      .|++||+|     ..|+..
T Consensus       443 ~C~~G~~G-----~~C~~~  456 (463)
T 2wg3_C          443 LCKKGYLG-----PQCEQV  456 (463)
T ss_dssp             -------------------
T ss_pred             ECCCCccc-----CCCCCC
Confidence            99999999     777654

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.08  E-value=0.0052  Score=41.18  Aligned_cols=41  Identities=20%  Similarity=0.459  Sum_probs=31.5

Q ss_pred             CEEeeCC-CCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427          89 AVCIPED-HRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED  137 (324)
Q Consensus        89 ~~C~~~~-~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~  137 (324)
                      ..|+++. ++|.|.|++||.+.+.. +.|+++     ...||  ...|+|
T Consensus        11 ~~C~n~~~gs~~C~C~~Gy~L~~D~-~tC~d~-----~~~pC--~~~c~n   52 (59)
T 2wph_E           11 QFCKNSADNKVVCSCTEGYRLAENQ-KSCEPA-----VPFPC--GRVSVS   52 (59)
T ss_dssp             SEEEECSTTCEEEECCTTEEECTTS-SCEEES-----SSSCT--TCCCSC
T ss_pred             CEeEeCCCCCEEeeCCCCcEECCCC-CcccCC-----CCCCC--CCcccc
Confidence            5899998 69999999999976554 789887     33466  355666

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.00  E-value=0.0042  Score=40.47  Aligned_cols=27  Identities=26%  Similarity=0.570  Sum_probs=23.3

Q ss_pred             CCCCCCCEeee----CCCceeeeeCCCeeecC
Q psy9427          20 VSCGVNAVCVV----NNHEARCFCPPGSYVGD   47 (324)
Q Consensus        20 ~~C~~~~~C~~----~~~~~~C~C~~G~y~g~   47 (324)
                      +||.++|+|++    ..++|+|.|++| |+|.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~G-f~G~   44 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIG-FMGQ   44 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTT-EEST
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCC-CcCC
Confidence            58999999996    356899999999 9995

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.98  E-value=0.0048  Score=57.92  Aligned_cols=97  Identities=23%  Similarity=0.546  Sum_probs=30.9

Q ss_pred             CCCC-CEeeeCCCceeeeeCCCeeecCCCCCCccc----CCCCCCcCC----CCCcee---CCCCcccCCCC--CCCCCC
Q psy9427          22 CGVN-AVCVVNNHEARCFCPPGSYVGDPNIECRQV----PCVHNHDCS----TSHACD---LLSHTCIPACD--SGACGT   87 (324)
Q Consensus        22 C~~~-~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~----~C~~~~~C~----~~~~C~---c~~~~Ci~~C~--~~~C~~   87 (324)
                      |..+ +.|....+.+.|.|+.| |+|...+.|.+.    |++.+..++    ....|.   |...  .+.|.  ..+|.+
T Consensus       299 CnGHas~C~~~~g~~~C~C~~~-ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~--g~~CD~~t~~C~n  375 (426)
T 3zyj_B          299 CNLHATVCVYDNSKLTCECEHN-TTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIG--TNVCDNELLHCQN  375 (426)
T ss_dssp             CSSSCSCEEEETTEEEECCCTT-EESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------
T ss_pred             CCCchhhcCCCCCCceeeCCCC-CcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCC--cCccccCcccCCC
Confidence            5444 48988778899999999 999877777652    454443221    112222   1100  12332  258888


Q ss_pred             CCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427          88 NAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED  137 (324)
Q Consensus        88 ~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~  137 (324)
                      +++|++..   .|.|++||.|     ..|+.        .+|..++.|..
T Consensus       376 gg~C~~~~---~C~C~~G~~G-----~~Ce~--------c~C~~~g~C~~  409 (426)
T 3zyj_B          376 GGTCHNNV---RCLCPAAYTG-----ILCEK--------LRCEEAGSCGS  409 (426)
T ss_dssp             --------------------------------------------------
T ss_pred             CCCcCCCC---CCcCCCCCcC-----CCCcC--------CCCCCCCcccC
Confidence            89998655   8999999999     55532        25666777765

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.87  E-value=0.0045  Score=50.13  Aligned_cols=36  Identities=33%  Similarity=0.823  Sum_probs=30.9

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcc
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQ   54 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~   54 (324)
                      ++|...||.++++|++..++|.|+|++| |.|.   .|..
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g-~~G~---~Ce~  155 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPG-FYGP---ECEY  155 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTT-EEST---TSCE
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCC-CcCc---cccc
Confidence            4577889999999999999999999999 9984   4555

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.91  E-value=0.016  Score=38.55  Aligned_cols=27  Identities=26%  Similarity=0.591  Sum_probs=22.8

Q ss_pred             CCCCCCEeee----CCCceeeeeCCCeeecCC
Q psy9427          21 SCGVNAVCVV----NNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        21 ~C~~~~~C~~----~~~~~~C~C~~G~y~g~~   48 (324)
                      ||.++|+|+.    ..++|.|.|++| |+|..
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~G-f~G~~   45 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIG-FMGQR   45 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTT-EESSS
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCC-CccCC
Confidence            8999999983    456799999999 99953

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=94.84  E-value=0.014  Score=39.03  Aligned_cols=32  Identities=31%  Similarity=0.550  Sum_probs=26.8

Q ss_pred             CCeeecCCCCC-CCeeeeCCCCCccCCCCCCCCCCC
Q psy9427         132 TARCEDTGATN-GKVVCSCPELSVGDPYKTGCVPQG  166 (324)
Q Consensus       132 ~~~C~~~~~~~-g~~~C~C~~G~~g~~~~~~C~~~~  166 (324)
                      ...|++   ++ |+|+|.|++||.+......|.+++
T Consensus        10 ~~~C~n---~~~gs~~C~C~~Gy~L~~D~~tC~d~~   42 (59)
T 2wph_E           10 EQFCKN---SADNKVVCSCTEGYRLAENQKSCEPAV   42 (59)
T ss_dssp             SSEEEE---CSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred             CCEeEe---CCCCCEEeeCCCCcEECCCCCcccCCC
Confidence            468999   88 699999999999877667788764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.75  E-value=0.033  Score=43.05  Aligned_cols=56  Identities=18%  Similarity=0.443  Sum_probs=38.1

Q ss_pred             CCCCCCEEeeCC--CCc-EeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427          84 ACGTNAVCIPED--HRP-VCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus        84 ~C~~~~~C~~~~--~~~-~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      ||.++++|++..  .+| .|.|++||+|     ..|+..++     .+|..+        ....|++.+..++.|..
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G-----~~Ce~~~~-----~~C~~g--------~G~~YrG~~~~t~sG~~   60 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGG-----QHCEIDKS-----KTCYEG--------NGHFYRGKASTDTMGRP   60 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEES-----TTSCEESS-----CCSBCS--------SCTTCCSCCCBBTTSCB
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCC-----ccccccCc-----CCCccc--------ccccceeeccccccCCc
Confidence            688999999874  556 9999999999     78876422     123211        12357777777777665

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=94.67  E-value=0.013  Score=39.13  Aligned_cols=31  Identities=23%  Similarity=0.545  Sum_probs=25.7

Q ss_pred             CCCCCCEEee----CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          84 ACGTNAVCIP----EDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        84 ~C~~~~~C~~----~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +|.++++|+.    ..++|.|.|++||+|     ..|+..
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G-----~~Ce~~   49 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMG-----QRCEYK   49 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEES-----SSSCEE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCcc-----CCCccc
Confidence            7889999983    445789999999999     778754

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=94.63  E-value=0.025  Score=55.51  Aligned_cols=35  Identities=23%  Similarity=0.597  Sum_probs=30.5

Q ss_pred             ccCCCCCCCCCCCEeee-CCCceeeeeC-CCeeecCCC
Q psy9427          14 WNSCDGVSCGVNAVCVV-NNHEARCFCP-PGSYVGDPN   49 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~y~g~~~   49 (324)
                      +|+|.++||.++|+|++ ..++|.|.|+ +| |+|..+
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G-~~G~~C   37 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTG-FYGENC   37 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSS-EETTTT
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCC-ccCCCC
Confidence            57899999999999995 5589999999 99 999643

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=94.61  E-value=0.019  Score=56.04  Aligned_cols=35  Identities=29%  Similarity=0.607  Sum_probs=31.4

Q ss_pred             ccCCCCCCCCCCCEeee-CCCceeeeeC-CCeeecCCC
Q psy9427          14 WNSCDGVSCGVNAVCVV-NNHEARCFCP-PGSYVGDPN   49 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~y~g~~~   49 (324)
                      +|+|.++||.++|+|++ ..++|+|.|+ +| |+|..+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G-~~G~~C   38 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTG-YSGPNC   38 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSS-EETTTT
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCC-cCCCCC
Confidence            47899999999999999 8999999999 99 999643

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=94.34  E-value=0.024  Score=53.19  Aligned_cols=81  Identities=21%  Similarity=0.534  Sum_probs=26.1

Q ss_pred             CCCC-CeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCC---CCCCCCCCC----CCCCcccCCcc---cCCCcc---CC
Q psy9427         129 CHPT-ARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQG---QCPRGDADC----PPSSRCSGGQC---VSVCQG---AC  194 (324)
Q Consensus       129 C~~~-~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~---eC~~~~~~C----~~~~~C~~~~C---~d~C~~---~C  194 (324)
                      |..+ ..|..   ..+.++|.|+++++|..+. .|.+.-   .+... ..+    .....|..-.|   -+.|+.   +|
T Consensus       299 CnGHas~C~~---~~g~~~C~C~~~ttG~~CE-~C~pgy~~~P~~~g-t~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C  373 (426)
T 3zyj_B          299 CNLHATVCVY---DNSKLTCECEHNTTGPDCG-KCKKNYQGRPWSPG-SYLPIPKGAANACIPSISSIGTNVCDNELLHC  373 (426)
T ss_dssp             CSSSCSCEEE---ETTEEEECCCTTEESSSSC-EECTTCCSSCCCCC-BCCSSSSCBCCCCCCCCC--------------
T ss_pred             CCCchhhcCC---CCCCceeeCCCCCcCCCcc-ccccccccCcccCC-cccccCCCCCCcccCCCCCCCcCccccCcccC
Confidence            5433 47887   6778999999999998864 343321   11000 000    00112221111   223433   78


Q ss_pred             CCCCeeeeCCCCceeeCCCCCcc
Q psy9427         195 GPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       195 ~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .++++|++..   +|.|++||.|
T Consensus       374 ~ngg~C~~~~---~C~C~~G~~G  393 (426)
T 3zyj_B          374 QNGGTCHNNV---RCLCPAAYTG  393 (426)
T ss_dssp             -----------------------
T ss_pred             CCCCCcCCCC---CCcCCCCCcC
Confidence            8999998765   8999999997

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=94.05  E-value=0.018  Score=47.11  Aligned_cols=51  Identities=22%  Similarity=0.404  Sum_probs=35.7

Q ss_pred             CCCcCCCCCCCcccccCCCCCCCC----CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCC
Q psy9427         104 VGTHPSPSPDVHCARESNLCRDSN----PCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVP  164 (324)
Q Consensus       104 ~G~~g~~~~~~~C~~~~~~C~~~~----~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~  164 (324)
                      +||.+.    ..+.++ ++|....    +|.  ..|++   +.|+|+|+|++||++......|++
T Consensus       113 ~Gf~~~----~~~~di-~eC~~~~~~~~~C~--~~C~n---~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          113 TGFEAF----YAAEDI-DECQVAPGEAPTCD--HHCHN---HLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             CEEEEE----EEEEEC-CTTCCCTTSCCSSS--SEEEE---ETTEEEEECCTTEEECTTSSCEEE
T ss_pred             cCceee----eecccc-CcccCCCCCCCccC--Ccccc---CCCCEEEeCCCCcEECCCCCcccc
Confidence            667661    234566 9994432    274  48999   999999999999997765555654

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=93.99  E-value=0.025  Score=55.25  Aligned_cols=37  Identities=22%  Similarity=0.582  Sum_probs=33.4

Q ss_pred             cCCCCCCCCCCCCEEee-CCCCcEeeCC-CCCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIP-EDHRPVCHCP-VGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~~~~C~~  118 (324)
                      +|+|.++||.++++|++ ..++|.|.|+ +||+|     ..|+.
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G-----~~Ce~   40 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSG-----PNCTI   40 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEET-----TTTCE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCC-----CCCCC
Confidence            57888899999999999 8999999999 99999     77764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=93.64  E-value=0.1  Score=40.21  Aligned_cols=26  Identities=31%  Similarity=0.746  Sum_probs=22.0

Q ss_pred             CCCCCCEeeeCC--Cce-eeeeCCCeeecC
Q psy9427          21 SCGVNAVCVVNN--HEA-RCFCPPGSYVGD   47 (324)
Q Consensus        21 ~C~~~~~C~~~~--~~~-~C~C~~G~y~g~   47 (324)
                      ||.++++|++..  .+| +|.|++| |+|.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g-~~G~   30 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKK-FGGQ   30 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTT-EEST
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCC-CCCc
Confidence            799999998873  455 9999999 9985

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=93.46  E-value=0.039  Score=54.06  Aligned_cols=37  Identities=22%  Similarity=0.552  Sum_probs=32.1

Q ss_pred             cCCCCCCCCCCCCEEee-CCCCcEeeCC-CCCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIP-EDHRPVCHCP-VGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~~~~C~~  118 (324)
                      +++|.++||.++++|++ ..++|.|.|+ +||+|     ..|+.
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G-----~~Ce~   39 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYG-----ENCTT   39 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEET-----TTTCE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccC-----CCCCC
Confidence            57898999999999995 5589999999 99999     67764

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=92.36  E-value=0.065  Score=43.20  Aligned_cols=26  Identities=19%  Similarity=0.565  Sum_probs=23.6

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCccC
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSAV  218 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g~  218 (324)
                      +|..+++|++..++|+|.|++||.|.
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~g~  151 (164)
T 3cfw_A          126 SCSGHGECVEIINNYTCNCDVGYYGP  151 (164)
T ss_dssp             SSCSSEEEEEETTEEEEEECTTCBSS
T ss_pred             cCCCCCeecccCCCceeeeCCCcccc
Confidence            67788999999999999999999973

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=91.17  E-value=0.13  Score=41.86  Aligned_cols=40  Identities=20%  Similarity=0.470  Sum_probs=30.0

Q ss_pred             cCCCCCCC-----CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          77 IPACDSGA-----CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        77 i~~C~~~~-----C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +++|...+     |..  .|+++.++|.|.|++||++.+.. ..|+++
T Consensus       124 i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~-~~C~~~  168 (170)
T 1szb_A          124 IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNK-RTCSEQ  168 (170)
T ss_dssp             CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTS-SCEEEC
T ss_pred             cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCC-Cccccc
Confidence            57776433     653  89999999999999999965543 677654

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.96  E-value=0.13  Score=41.20  Aligned_cols=43  Identities=28%  Similarity=0.515  Sum_probs=31.1

Q ss_pred             cccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427         115 HCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV  163 (324)
Q Consensus       115 ~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~  163 (324)
                      .+.++ ++|...  .+|  ...|.+   +.++|+|+|++||++......|+
T Consensus       113 ~~~d~-~eC~~~~~~~C--~~~C~n---~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          113 VATDI-NECTDFVDVPC--SHFCNN---FIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             EEEEC-CTTTC-CCCCS--SSEEEE---ETTEEEEECCTTCEECTTSSCEE
T ss_pred             ecccC-cccCCCCCCCC--CCcccC---cCCCEEEecCCCcEECCCCCccc
Confidence            34556 899543  256  468999   99999999999999766444454

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=90.76  E-value=0.069  Score=42.60  Aligned_cols=37  Identities=22%  Similarity=0.656  Sum_probs=32.7

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      +++|...||.+++.|.+...+|.|.|.+||+|     ..|+.
T Consensus       119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g-----~~Ce~  155 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETINNYTCKCDPGFSG-----LKCEQ  155 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEETTEEEEEECTTEES-----TTSCE
T ss_pred             cCCCCCCCCCCCCEeecCCCCeeEECCCCccC-----ccccc
Confidence            67787788988899999999999999999999     67764

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=89.10  E-value=0.75  Score=33.24  Aligned_cols=69  Identities=25%  Similarity=0.550  Sum_probs=50.8

Q ss_pred             CCCCCCCCCCEEeeC-CCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCC-CCCCCCeeecCCCCC-CCeeeeCCCCCc
Q psy9427          80 CDSGACGTNAVCIPE-DHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSN-PCHPTARCEDTGATN-GKVVCSCPELSV  154 (324)
Q Consensus        80 C~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~-~C~~~~~C~~~~~~~-g~~~C~C~~G~~  154 (324)
                      |....|..+|.|... .+.-.|+|..+|.-+.   ..|... .-.|+..+ -|..+|.|..   .. ...+|+|...+.
T Consensus         7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~---~kCV~~~~~~C~~NNGGCd~nA~C~~---~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A            7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDA---GKCVPAPNMTCKDKNGGCAPEAECKM---NDKNEIVCKCTKEGS   79 (95)
T ss_dssp             CSSCCCCTTEEEEECTTSCEEEEECTTEEEET---TEEEECTTCCTTTGGGGSCTTSEEEE---CTTSCEEEECCSTTE
T ss_pred             cccCCCCCCcCeEEEcCCCEEEEEECCeEecC---CEEEcCCCCCccccCCCcCCCcceee---cCCCcEEEECCCCCC
Confidence            333467889999985 5788999999998754   678765 12563322 5999999997   55 678999988764

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=88.59  E-value=0.32  Score=34.28  Aligned_cols=34  Identities=26%  Similarity=0.599  Sum_probs=24.5

Q ss_pred             cccCCC---CCCCCCCCEeee--CCCceeeeeCCCeeecCC
Q psy9427          13 CWNSCD---GVSCGVNAVCVV--NNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        13 c~~~C~---~~~C~~~~~C~~--~~~~~~C~C~~G~y~g~~   48 (324)
                      -.++|.   .+.|.++ +|+.  ..+.+.|.|++| |+|..
T Consensus        36 ~~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~G-YtG~R   74 (79)
T 1xdt_R           36 KRDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPG-YHGER   74 (79)
T ss_dssp             ---CTTTTTTTCCSSE-EECCBGGGTBCCEEECTT-EESTT
T ss_pred             cCCCCCccccCcCCCC-EeeeecCCCCeEEEcCCC-ccccc
Confidence            356787   5789886 9953  346789999999 99953

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=88.32  E-value=0.16  Score=46.22  Aligned_cols=41  Identities=24%  Similarity=0.600  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCC
Q psy9427         121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQG  166 (324)
Q Consensus       121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~  166 (324)
                      |||+....|  ...|+|   ++|+|+|.|++||........|...+
T Consensus         2 ~ec~~~~~C--~~~C~n---~~g~~~C~C~~g~~l~~d~~~C~~~~   42 (349)
T 3v64_C            2 NECAEEGYC--SQGCTN---SEGAFQCWCEAGYELRPDRRSCKALG   42 (349)
T ss_dssp             -------CC--SSEECC---C---CCEECCTTEEECTTSSCEEESS
T ss_pred             cccCCCCCC--cCeeec---CCCCeEEECCCCccCCCCCCcccccc
Confidence            778423356  569999   99999999999999876566676443

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=88.00  E-value=0.37  Score=30.82  Aligned_cols=24  Identities=29%  Similarity=0.854  Sum_probs=19.5

Q ss_pred             CCCCCCeeeeC--CCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAV--GKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~--~g~y~C~C~~Gy~g  217 (324)
                      .|.++ +|...  .+.+.|.|+.||+|
T Consensus        15 yC~nG-~C~~~~~~~~~~C~C~~gy~G   40 (50)
T 3e50_C           15 FCFHG-TCRFLVQEDKPACVCHSGYVG   40 (50)
T ss_pred             cccCC-EEeeccCCCCeEEECCCCCcc
Confidence            57776 99853  46799999999998

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=87.60  E-value=0.51  Score=43.92  Aligned_cols=32  Identities=25%  Similarity=0.626  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCC-CeeecC
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPP-GSYVGD   47 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~y~g~   47 (324)
                      ++|..+||.++++|+....+|+|.|+. | |.|.
T Consensus       186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~-~~G~  218 (410)
T 3asi_A          186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTS-FSGP  218 (410)
T ss_dssp             SCCCTTSSSTTCEEEECSSSEEEECTTTS-EEST
T ss_pred             CCcccccCCCCCEecCCCCCceEeccCCc-ccCC
Confidence            579999999999999999999999996 9 8885

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=87.08  E-value=0.5  Score=30.22  Aligned_cols=31  Identities=23%  Similarity=0.607  Sum_probs=24.2

Q ss_pred             CCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          83 GACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        83 ~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.|.++ +|..  ..+.+.|.|++||+|     ..|+..
T Consensus        14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G-----~RCe~~   46 (50)
T 3e50_C           14 QFCFHG-TCRFLVQEDKPACVCHSGYVG-----ARCEHA   46 (50)
T ss_pred             CcccCC-EEeeccCCCCeEEECCCCCcc-----cCCCce
Confidence            567765 9985  346799999999999     777654

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=86.71  E-value=0.4  Score=39.60  Aligned_cols=26  Identities=38%  Similarity=1.154  Sum_probs=21.1

Q ss_pred             CCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         189 VCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       189 ~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|...|.++|.|+...   +|.|++||.|
T Consensus       150 ~C~~~C~ngG~Cv~P~---~C~C~~Gw~G  175 (188)
T 2ygo_A          150 ECPGGCRNGGFCNERR---ICECPDGFHG  175 (188)
T ss_dssp             CCTTCCCTTCEECTTS---CEECCTTCBT
T ss_pred             ccCCCCCCCCEeCCCC---cccCcCCCCC
Confidence            3445789999998644   7999999998

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=86.62  E-value=0.28  Score=34.61  Aligned_cols=36  Identities=28%  Similarity=0.516  Sum_probs=24.9

Q ss_pred             cCCCC---CCCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACD---SGACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~---~~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      .++|.   .+.|.++ +|+.  ..+.+.|.|.+||+|     ..|+.
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG-----~RCE~   77 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHG-----ERCHG   77 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEES-----TTCCE
T ss_pred             CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccc-----ccccc
Confidence            34554   4678775 8953  346789999999999     67754

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=86.09  E-value=0.56  Score=29.97  Aligned_cols=24  Identities=17%  Similarity=0.462  Sum_probs=19.1

Q ss_pred             CCCCCCeee--eCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCR--AVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~--~~~g~y~C~C~~Gy~g  217 (324)
                      .|.+ ++|+  ...+.+.|.|+.||+|
T Consensus        19 yC~n-G~C~~i~~~~~~~C~C~~gy~G   44 (50)
T 2rnl_A           19 FCIH-GECKYIEHLEAVTCKCQQEYFG   44 (50)
T ss_dssp             TCSS-SEEEEETTTTEEEEECCSSCCS
T ss_pred             cCCC-CEEEEecCCCCeeEECCCCccc
Confidence            5766 5997  4456789999999997

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=85.72  E-value=0.68  Score=29.56  Aligned_cols=29  Identities=17%  Similarity=0.402  Sum_probs=22.3

Q ss_pred             CCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          83 GACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        83 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      +.|.+ ++|+  ...+.+.|.|++||+|     ..|+
T Consensus        18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G-----~RCe   48 (50)
T 2rnl_A           18 NFCIH-GECKYIEHLEAVTCKCQQEYFG-----ERCG   48 (50)
T ss_dssp             GTCSS-SEEEEETTTTEEEEECCSSCCS-----SSCC
T ss_pred             CcCCC-CEEEEecCCCCeeEECCCCccc-----cccc
Confidence            56765 5997  4456789999999999     6664

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=85.66  E-value=0.58  Score=29.88  Aligned_cols=31  Identities=23%  Similarity=0.449  Sum_probs=23.0

Q ss_pred             CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427         127 NPCHPTARCEDTGATNGKVVCSCPELSVGDPYK  159 (324)
Q Consensus       127 ~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~  159 (324)
                      +.|.+ ++|..+. ..+.+.|+|++||+|+.++
T Consensus        14 ~yC~n-G~C~~~~-~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           14 HYCIK-GRCRFVV-AEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TSCTT-CCEEEET-TTTEEEECCCTTEETTTTC
T ss_pred             CcccC-CEEEeEc-CCCCeEEECCCCcccCCCC
Confidence            56776 7896210 5677999999999999843

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=85.27  E-value=0.38  Score=43.65  Aligned_cols=40  Identities=23%  Similarity=0.576  Sum_probs=23.3

Q ss_pred             cCCCC-CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          77 IPACD-SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        77 i~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ||||. .+.|.  ..|+++.++|.|.|++||.+.+.. +.|...
T Consensus         1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~~d~-~~C~~~   41 (349)
T 3v64_C            1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYELRPDR-RSCKAL   41 (349)
T ss_dssp             --------CCS--SEECCC---CCEECCTTEEECTTS-SCEEES
T ss_pred             CcccCCCCCCc--CeeecCCCCeEEECCCCccCCCCC-Cccccc
Confidence            45665 24464  589999999999999999976543 677654

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=85.17  E-value=0.71  Score=36.68  Aligned_cols=20  Identities=20%  Similarity=0.575  Sum_probs=18.4

Q ss_pred             CeeeeCCCCceeeCCCCCcc
Q psy9427         198 ALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       198 ~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      ..|.+..++|+|.|++||+.
T Consensus       130 ~~C~n~~g~~~C~C~~Gy~l  149 (159)
T 1nzi_A          130 HFCNNFIGGYFCSCPPEYFL  149 (159)
T ss_dssp             SEEEEETTEEEEECCTTCEE
T ss_pred             CcccCcCCCEEEecCCCcEE
Confidence            47999999999999999986

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=84.91  E-value=0.48  Score=30.27  Aligned_cols=31  Identities=26%  Similarity=0.580  Sum_probs=24.0

Q ss_pred             CCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          83 GACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        83 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.|.+ ++|+  ...+.+.|+|++||+|     ..|+..
T Consensus        14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G-----~RCe~~   46 (50)
T 1iox_A           14 HYCIK-GRCRFVVAEQTPSCVCDEGYIG-----ARCERV   46 (50)
T ss_dssp             TSCTT-CCEEEETTTTEEEECCCTTEET-----TTTCEE
T ss_pred             CcccC-CEEEeEcCCCCeEEECCCCccc-----CCCCee
Confidence            56776 6886  4456789999999999     788754

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=84.90  E-value=0.64  Score=43.22  Aligned_cols=37  Identities=19%  Similarity=0.576  Sum_probs=32.5

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCC-CCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPV-GTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~~g~~~~~~~C~~  118 (324)
                      .++|...||.++++|+....+|.|.|+. ||.|     ..|+.
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G-----~~C~~  222 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG-----PLCND  222 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEES-----TTSCE
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcccC-----CCCCC
Confidence            4688889999999999999999999996 9998     67764

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=84.37  E-value=1.2  Score=35.27  Aligned_cols=31  Identities=23%  Similarity=0.588  Sum_probs=25.1

Q ss_pred             CCCCCCEEeeC--CCCc-EeeCCCCCcCCCCCCCccccc
Q psy9427          84 ACGTNAVCIPE--DHRP-VCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        84 ~C~~~~~C~~~--~~~~-~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ||.++++|+..  ...+ .|.|++||.|     ..|+..
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G-----~~Cei~   47 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGG-----QHCEID   47 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEES-----TTSCEE
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCC-----Cceecc
Confidence            79999999865  2455 8999999999     788654

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=83.85  E-value=0.72  Score=40.56  Aligned_cols=43  Identities=21%  Similarity=0.668  Sum_probs=32.2

Q ss_pred             cCCCCCC---CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          77 IPACDSG---ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        77 i~~C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      +|||...   .|  ...|.++.++|.|.|.+||.+.... +.|... ++|
T Consensus         2 ~~eC~~~~~~~C--~~~C~~~~~~~~C~C~~G~~l~~d~-~sC~p~-~~c   47 (283)
T 3f1s_B            2 KNECHPERTDGC--QHFCLPGQESYTCSCAQGYRLGEDH-KQCVPH-DQC   47 (283)
T ss_dssp             -CCCCSSCSSSC--SSBCCCCTTSCCCBCCTTEEECTTS-SCEEEC-STT
T ss_pred             CCccCCCCCCCC--CCEeeCCCCCeEecCCCCcccCCCC-Cccccc-ccc
Confidence            4666533   45  3689999999999999999876544 788877 666

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=82.92  E-value=0.35  Score=38.32  Aligned_cols=25  Identities=28%  Similarity=0.678  Sum_probs=23.2

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +|.+++.|.+..+.|.|.|.+||+|
T Consensus       126 pc~~~g~C~~~~~~~~c~C~~g~~g  150 (157)
T 1g1t_A          126 SCSGHGECVETINNYTCKCDPGFSG  150 (157)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEES
T ss_pred             CCCCCCEeecCCCCeeEECCCCccC
Confidence            6778899999999999999999997

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=82.69  E-value=0.58  Score=41.15  Aligned_cols=44  Identities=27%  Similarity=0.575  Sum_probs=34.9

Q ss_pred             CCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427         121 NLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP  169 (324)
Q Consensus       121 ~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~  169 (324)
                      |||...  ..|  ...|.+   +.++|+|.|..||........|.+.++|.
T Consensus         3 ~eC~~~~~~~C--~~~C~~---~~~~~~C~C~~G~~l~~d~~sC~p~~~c~   48 (283)
T 3f1s_B            3 NECHPERTDGC--QHFCLP---GQESYTCSCAQGYRLGEDHKQCVPHDQCA   48 (283)
T ss_dssp             CCCCSSCSSSC--SSBCCC---CTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred             CccCCCCCCCC--CCEeeC---CCCCeEecCCCCcccCCCCCccccccccc
Confidence            788444  256  578999   99999999999999877667898877763

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=82.32  E-value=4.6  Score=29.11  Aligned_cols=70  Identities=24%  Similarity=0.480  Sum_probs=49.1

Q ss_pred             CCCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCCCEEe
Q psy9427          16 SCDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTNAVCI   92 (324)
Q Consensus        16 ~C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~~~C~   92 (324)
                      .|....|..||.|+. ..+.-.|.|..| |.-+ ...|...+                    ...|..  +-|..+|.|.
T Consensus         6 ~C~~tkcp~NA~Cyr~~dg~EecRClln-ykk~-~~kCV~~~--------------------~~~C~~NNGGCd~nA~C~   63 (95)
T 1b9w_A            6 RCIDTNVPENAACYRYLDGTEEWRCLLY-FKED-AGKCVPAP--------------------NMTCKDKNGGCAPEAECK   63 (95)
T ss_dssp             SCSSCCCCTTEEEEECTTSCEEEEECTT-EEEE-TTEEEECT--------------------TCCTTTGGGGSCTTSEEE
T ss_pred             ccccCCCCCCcCeEEEcCCCEEEEEECC-eEec-CCEEEcCC--------------------CCCccccCCCcCCCccee
Confidence            355557899999997 468889999999 7753 22344310                    113332  4577889999


Q ss_pred             eCC-CCcEeeCCCCCc
Q psy9427          93 PED-HRPVCHCPVGTH  107 (324)
Q Consensus        93 ~~~-~~~~C~C~~G~~  107 (324)
                      ... ..-.|.|...+.
T Consensus        64 ~~~~~kIvC~C~~~~~   79 (95)
T 1b9w_A           64 MNDKNEIVCKCTKEGS   79 (95)
T ss_dssp             ECTTSCEEEECCSTTE
T ss_pred             ecCCCcEEEECCCCCC
Confidence            877 788999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	324
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.48
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.46
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.37
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.37
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.37
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.36
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.36
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.35
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.32
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.3
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.29
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.24
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.24
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.14
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.11
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.1
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.06
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.06
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.02
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.01
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.91
d1szba2	45	Mannose-binding protein associated serine protease	97.89
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.85
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.82
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.81
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.81
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.8
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.8
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.8
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.76
d1nt0a3	45	Mannose-binding protein associated serine protease	97.76
d1szba2	45	Mannose-binding protein associated serine protease	97.75
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.72
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.72
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.71
d1nt0a3	45	Mannose-binding protein associated serine protease	97.66
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.64
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.58
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.57
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.45
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.39
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.07
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.06
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	96.96
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.93
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.87
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.84
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.77
d1oiga_	26	Dumpy {Fruit fly (Drosophila melanogaster) [TaxId:	96.65
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.52
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	96.48
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.37
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.3
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.16
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.76
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	95.55
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.51
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.47
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.09
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	92.61
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	92.49
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	92.4
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	92.22
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	91.96
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	91.43
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	90.39
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	90.28
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	89.63
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	89.17
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	88.83
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	88.82
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	84.99
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	84.94
d1oiga_	26	Dumpy {Fruit fly (Drosophila melanogaster) [TaxId:	84.17
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	83.53
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	81.33

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=6.1e-08  Score=58.28  Aligned_cols=37  Identities=30%  Similarity=0.662  Sum_probs=34.2

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      ||+|.++||.++++|++..++|.|.|++||+|     ..|+.
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G-----~~Ce~   37 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEG-----VHCEV   37 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEES-----SSSCE
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCcc-----CcCee
Confidence            68999999999999999999999999999999     77764

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=9.9e-08  Score=57.32  Aligned_cols=34  Identities=35%  Similarity=0.740  Sum_probs=31.7

Q ss_pred             ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      ||+|..+||.++|+|++..++|+|.|++| |+|..
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G-~~G~~   34 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPG-YEGVH   34 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTT-EESSS
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCC-CccCc
Confidence            68999999999999999999999999999 99953

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=2.2e-07  Score=56.92  Aligned_cols=34  Identities=24%  Similarity=0.584  Sum_probs=30.7

Q ss_pred             cccCCC--CCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          13 CWNSCD--GVSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        13 c~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      .+|+|+  .+||.++|+|+++.++|+|.|++| |+|.
T Consensus         2 DideC~~~~~pC~n~g~C~n~~g~y~C~C~~G-~~G~   37 (42)
T d2vj3a1           2 DVDECSLGANPCEHAGKCINTLGSFECQCLQG-YTGP   37 (42)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTT-EEST
T ss_pred             CCccccCCCCCCCCCcEeECCCCCEEeECCCC-CcCC
Confidence            467786  579999999999999999999999 9985

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.7e-07  Score=56.32  Aligned_cols=34  Identities=24%  Similarity=0.670  Sum_probs=31.7

Q ss_pred             ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      +|+|..+||.++|+|++..++|+|.|++| |+|..
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g-~~G~~   36 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFG-FEGKN   36 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTT-CCSTT
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCC-CCCCC
Confidence            68999999999999999999999999999 99853

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.37  E-value=1.1e-07  Score=56.39  Aligned_cols=33  Identities=24%  Similarity=0.650  Sum_probs=31.2

Q ss_pred             ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      +|+|..+||.++|+|++..++|+|+|++| |+|.
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g-~~G~   34 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPA-FEGR   34 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTT-EEST
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCC-CcCC
Confidence            68899999999999999999999999999 9985

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.6e-07  Score=57.58  Aligned_cols=36  Identities=22%  Similarity=0.573  Sum_probs=32.4

Q ss_pred             cCCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          77 IPACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        77 i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      ||+|.  ++||.++++|+++.++|+|.|++||+|     ..|+
T Consensus         3 ideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G-----~~Ce   40 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTG-----PRCE   40 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES-----TTSC
T ss_pred             CccccCCCCCCCCCcEeECCCCCEEeECCCCCcC-----CCCc
Confidence            78886  579999999999999999999999999     6665

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.6e-07  Score=56.38  Aligned_cols=36  Identities=25%  Similarity=0.620  Sum_probs=33.2

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      +|+|.++||.++++|++..++|.|.|++||+|     ..|+
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G-----~~Ce   38 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG-----KNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCS-----TTSC
T ss_pred             cccCCCCCCCCCcEEEcCCCCEEEECCCCCCC-----CCCC
Confidence            68999999999999999999999999999999     6664

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.35  E-value=1e-07  Score=56.64  Aligned_cols=32  Identities=19%  Similarity=0.448  Sum_probs=30.8

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHP  108 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g  108 (324)
                      +|+|.++||.++++|++..++|.|.|++||+|
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G   33 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG   33 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEES
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcC
Confidence            68999999999999999999999999999999

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3e-07  Score=53.85  Aligned_cols=32  Identities=31%  Similarity=0.819  Sum_probs=30.2

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      |+|..+||.++|+|++..++|+|.|++| |+|.
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g-~~G~   32 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTG-FTGH   32 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTT-EESS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCC-CCCC
Confidence            6899999999999999999999999999 9985

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.9e-07  Score=53.88  Aligned_cols=31  Identities=29%  Similarity=0.681  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHP  108 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g  108 (324)
                      |+|.++||.++++|++..++|+|.|++||+|
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G   31 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTG   31 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCC
Confidence            5788899999999999999999999999999

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.2e-07  Score=55.03  Aligned_cols=33  Identities=24%  Similarity=0.615  Sum_probs=30.6

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      |+|+++||.++|+|++..++|+|.|++| |+|..
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G-~~G~~   33 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEG-FEGKN   33 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTT-EETTT
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCC-CCcCc
Confidence            6799999999999999999999999999 99963

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.9e-07  Score=56.09  Aligned_cols=24  Identities=25%  Similarity=0.753  Sum_probs=21.1

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|. +++|+|++|+|+|.|++||++
T Consensus        12 ~C~-~~~C~Nt~Gsy~C~C~~Gy~~   35 (44)
T d1lmja1          12 LCG-RGQCVNTPGDFECKCDEGYES   35 (44)
T ss_dssp             TTT-TSCEEEETTEEEECCCSSEEE
T ss_pred             CCC-CCEeEcCCCCeEEeCCCCCcc
Confidence            354 578999999999999999987

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.5e-07  Score=54.85  Aligned_cols=36  Identities=19%  Similarity=0.522  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      |+|.++||.++++|++..++|.|.|++||+|     ..|+.
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G-----~~Cei   36 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG-----KNCEL   36 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEET-----TTTCE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCc-----CcCeE
Confidence            5788899999999999999999999999999     77764

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.6e-07  Score=57.79  Aligned_cols=38  Identities=18%  Similarity=0.392  Sum_probs=31.5

Q ss_pred             cccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         115 HCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       115 ~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      .|.++ ||| ...++..+++|+|   ++|+|+|.|++||++++
T Consensus         1 sCvDi-dEC-~~~~~~~~~~C~N---t~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           1 SAVDM-DEC-KEPDVCKHGQCIN---TDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCC-CSS-SSTTSCSSSCCCC---CSSCCCCCCCTTEEESS
T ss_pred             CCcce-ecc-CCcCCCCCCEeEC---CCCCeEeECCCCcccCC
Confidence            36788 999 4444556889999   99999999999999865

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.1e-07  Score=57.22  Aligned_cols=38  Identities=24%  Similarity=0.558  Sum_probs=32.5

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      ||||+..++..+++|+|+.|+|.|.|++||++++   ..|+
T Consensus         5 idEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g---~~C~   42 (43)
T d1emoa1           5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAG---NECV   42 (43)
T ss_dssp             CCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESS---SCEE
T ss_pred             eeccCCcCCCCCCEeECCCCCeEeECCCCcccCC---Cccc
Confidence            8999877676789999999999999999999865   5564

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=5e-07  Score=54.20  Aligned_cols=33  Identities=30%  Similarity=0.737  Sum_probs=30.6

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      ++|..+||.++|+|++..++|+|.|++| |+|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g-~~G~~   34 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPG-FSGLK   34 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTT-EESTT
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCC-CcCcC
Confidence            6799999999999999999999999999 99953

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=3.1e-07  Score=56.14  Aligned_cols=24  Identities=25%  Similarity=0.722  Sum_probs=21.1

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|. +++|+|++|+|+|.|++||+.
T Consensus        11 ~C~-~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          11 LCR-GGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TTT-TSEEEEETTEEEEESCTTSCC
T ss_pred             CCC-CCEeECCCCCeEEeCCCCCeE
Confidence            454 579999999999999999985

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=2.1e-06  Score=55.17  Aligned_cols=42  Identities=17%  Similarity=0.351  Sum_probs=30.6

Q ss_pred             CCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         163 VPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       163 ~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +|++||+.....|....             .++-.++|+|++|+|+|.|++||+.
T Consensus         2 vDidEC~~~~~~c~~~~-------------~~~c~~~C~Nt~GsY~C~C~~Gy~l   43 (53)
T d1apqa_           2 VDLDECASRSKSGEEDP-------------QPQCQHLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             CSCCTTTCSTTTCCCSS-------------SCTTSSEEEEETTEEEEECSTTCEE
T ss_pred             eecccccCCCCCcccCC-------------CCCccCEeEcCCCCeEeECCCCCeE
Confidence            47888876655443111             2334568999999999999999986

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=6.5e-07  Score=55.00  Aligned_cols=41  Identities=34%  Similarity=0.786  Sum_probs=32.3

Q ss_pred             ccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427         118 RESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV  163 (324)
Q Consensus       118 ~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~  163 (324)
                      +| |||+..+.+ .++.|+|   ++|+|+|.|++||.+......|+
T Consensus         2 Di-dEC~~~~~~-c~~~C~N---t~G~y~C~C~~Gy~l~~d~~~C~   42 (43)
T d1uzka1           2 DV-NECLDPTTC-ISGNCVN---TPGSYICDCPPDFELNPTRVGCV   42 (43)
T ss_dssp             CC-CGGGSTTSS-BTSEEEE---ETTEEEEECCTTCEECTTSSBEE
T ss_pred             Cc-cccCCCCcC-cCCEeEC---CCCCEEEecCCCCEECCCCCccc
Confidence            45 899555544 4789999   99999999999999887555554

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=9.9e-07  Score=53.52  Aligned_cols=39  Identities=28%  Similarity=0.672  Sum_probs=31.9

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCC
Q psy9427         121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVP  164 (324)
Q Consensus       121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~  164 (324)
                      |||+..++|  .+.|+|   ++|+|+|.|++||++....+.|++
T Consensus         2 dEC~~~~~C--~~~C~n---~~Gsy~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           2 DECQDPDTC--SQLCVN---LEGGYKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CTTTTTTSC--SSCEEC---SSSCCEECCCTTEEECTTTCCEEE
T ss_pred             ccCCCCCCC--CCEeEC---CCCCEEeECCCCCeECCCCCcccc
Confidence            889665677  579999   999999999999998876555653

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.1e-06  Score=52.91  Aligned_cols=33  Identities=30%  Similarity=0.753  Sum_probs=30.5

Q ss_pred             cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      +.|..+||.++|+|+...++|+|.|++| |+|..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g-~~G~~   34 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPG-FYGPE   34 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTT-EESTT
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCC-ccCCC
Confidence            6799999999999999999999999999 99953

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.3e-06  Score=53.65  Aligned_cols=40  Identities=20%  Similarity=0.538  Sum_probs=31.2

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      ||||+......++.|+|+.++|.|.|++||++++.. +.|+
T Consensus         3 idEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~-~~C~   42 (43)
T d1uzka1           3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTR-VGCV   42 (43)
T ss_dssp             CCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTS-SBEE
T ss_pred             ccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCC-Cccc
Confidence            788865443346899999999999999999987654 5554

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=3.6e-07  Score=56.14  Aligned_cols=24  Identities=25%  Similarity=0.607  Sum_probs=20.8

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      .|. +++|+|++|+|+|.|++||+.
T Consensus        12 ~c~-~~~C~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2          12 LCQ-GGKCINTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             GGB-TSEEEECSSCEEEECCTTCCB
T ss_pred             CcC-CCEEECCCCCeEeECCCCCeE
Confidence            354 468999999999999999985

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=8.8e-07  Score=53.41  Aligned_cols=37  Identities=19%  Similarity=0.485  Sum_probs=33.4

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.|.++||.++++|+...++|+|.|++||.|     ..|+.+
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G-----~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYG-----PECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEES-----TTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccC-----CCCCCC
Confidence            5677899999999999999999999999999     788765

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=6e-07  Score=53.83  Aligned_cols=37  Identities=22%  Similarity=0.637  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ++|.++||.++++|++..++|+|.|++||+|     ..|+..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G-----~~Ce~~   38 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSG-----LKCEQI   38 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEES-----TTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcC-----cCcCcc
Confidence            5688899999999999999999999999999     777653

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.91  E-value=3.5e-06  Score=51.21  Aligned_cols=34  Identities=29%  Similarity=0.598  Sum_probs=29.6

Q ss_pred             ccCCCCCCCCCCCEeeeC-CCceeeeeCC-CeeecCC
Q psy9427          14 WNSCDGVSCGVNAVCVVN-NHEARCFCPP-GSYVGDP   48 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~-~~~~~C~C~~-G~y~g~~   48 (324)
                      +|+|..+||.++|+|+.. .++|+|.|++ | |+|..
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G-~~G~~   37 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTG-YSGPN   37 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSS-EETTT
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCC-cCCcC
Confidence            578999999999999874 6889999986 9 99953

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=3.7e-06  Score=52.01  Aligned_cols=30  Identities=17%  Similarity=0.420  Sum_probs=24.2

Q ss_pred             CCeeeeCCCCceeeCCCCCccCCCCCCCCccc
Q psy9427         197 NALCRAVGKRPVCACPDGFSAVGGEARVGCFR  228 (324)
Q Consensus       197 ~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~  228 (324)
                      .++|+|++|+|+|.|++||+.  ..+.+.|+|
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l--~~d~~tC~D   44 (45)
T d1szba2          15 DHHCHNHLGGFYCSCRAGYVL--HRNKRTCSE   44 (45)
T ss_dssp             SSEEEEETTEEEEECCTTEEE--CTTSSCEEE
T ss_pred             CCCCccCCCCeEEECCCCCeE--CCCCCCccC
Confidence            578999999999999999986  344455654

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.1e-06  Score=50.25  Aligned_cols=39  Identities=23%  Similarity=0.670  Sum_probs=30.5

Q ss_pred             cCCCCC-CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDS-GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      ||||+. ++|  .+.|+|+.++|+|.|++||++++.. +.|++
T Consensus         1 idEC~~~~~C--~~~C~n~~Gsy~C~C~~Gy~L~~d~-~~C~a   40 (41)
T d1i0ua2           1 IDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDPHT-KACKA   40 (41)
T ss_dssp             CCTTTTTTSC--SSCEECSSSCCEECCCTTEEECTTT-CCEEE
T ss_pred             CccCCCCCCC--CCEeECCCCCEEeECCCCCeECCCC-Ccccc
Confidence            577752 355  4699999999999999999987654 66764

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=2.4e-06  Score=52.03  Aligned_cols=38  Identities=26%  Similarity=0.665  Sum_probs=28.7

Q ss_pred             CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCC
Q psy9427         121 NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGC  162 (324)
Q Consensus       121 ~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C  162 (324)
                      |||+.. ..|. +++|+|   ++|+|+|.|++||+.......|
T Consensus         3 dEC~~~~~~C~-~~~C~N---t~Gsy~C~C~~Gy~l~~d~~~C   41 (42)
T d1lmja2           3 DECQRDPLLCR-GGVCHN---TEGSYRCECPPGHQLSPNISAC   41 (42)
T ss_dssp             CHHHHCSSTTT-TSEEEE---ETTEEEEESCTTSCCCSSSCCC
T ss_pred             cccCCCCCCCC-CCEeEC---CCCCeEEeCCCCCeECcCCCcc
Confidence            777332 2564 689999   9999999999999977644444

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.82  E-value=4.1e-06  Score=50.91  Aligned_cols=37  Identities=22%  Similarity=0.537  Sum_probs=32.0

Q ss_pred             cCCCCCCCCCCCCEEeeC-CCCcEeeCCC-CCcCCCCCCCcccc
Q psy9427          77 IPACDSGACGTNAVCIPE-DHRPVCHCPV-GTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~-~~~~~C~C~~-G~~g~~~~~~~C~~  118 (324)
                      ||+|.++||.++++|++. .++|.|.|++ ||+|     ..|+.
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G-----~~Ce~   40 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSG-----PNCTI   40 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEET-----TTTCE
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCC-----cCcCc
Confidence            688999999999999975 6889999986 9999     77764

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=1.1e-05  Score=48.70  Aligned_cols=34  Identities=24%  Similarity=0.633  Sum_probs=29.2

Q ss_pred             ccCCCCCCCCCCCEeeeC-CCceeeeeC-CCeeecCC
Q psy9427          14 WNSCDGVSCGVNAVCVVN-NHEARCFCP-PGSYVGDP   48 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~-~~~~~C~C~-~G~y~g~~   48 (324)
                      .|+|..+||.++|+|++. .++|+|.|+ +| |+|..
T Consensus         1 ad~C~~~PC~ngG~C~~~~~~~y~C~C~~~g-y~G~~   36 (41)
T d1cvua2           1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTG-FYGEN   36 (41)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSS-EETTT
T ss_pred             CCcCcCCCCCCCCEEEECCCCCEEEeCcCCC-cCCcC
Confidence            378999999999999875 688999997 69 99953

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5e-06  Score=50.97  Aligned_cols=35  Identities=29%  Similarity=0.505  Sum_probs=28.5

Q ss_pred             ccCCCCCCCC-CCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         118 RESNLCRDSN-PCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       118 ~~~~~C~~~~-~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      || |||+... +|. +++|+|   ++|+|+|.|++||.++.
T Consensus         2 Di-dEC~~~~~~C~-~~~C~N---t~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           2 DI-DECRISPDLCG-RGQCVN---TPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CC-CTTTTCSSTTT-TSCEEE---ETTEEEECCCSSEEECT
T ss_pred             cc-cccCCCCCCCC-CCEeEc---CCCCeEEeCCCCCccCC
Confidence            45 9995433 564 689999   99999999999999874

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.3e-05  Score=48.36  Aligned_cols=35  Identities=26%  Similarity=0.605  Sum_probs=29.4

Q ss_pred             CCCCCCCCCCEEeeC--CCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          80 CDSGACGTNAVCIPE--DHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        80 C~~~~C~~~~~C~~~--~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      |.++||.++++|+..  ..+|+|.|++||+|     ..|+..
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G-----~~Ce~~   37 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAG-----KSCEID   37 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTTCBS-----SSCCBC
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCCCCC-----CCcCcC
Confidence            557899999999964  46799999999999     788754

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=2e-06  Score=52.64  Aligned_cols=40  Identities=23%  Similarity=0.535  Sum_probs=29.9

Q ss_pred             ccCCCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCC
Q psy9427         118 RESNLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGC  162 (324)
Q Consensus       118 ~~~~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C  162 (324)
                      || |||+.. ..|. +++|+|   ++|+|+|+|++||+.....+.|
T Consensus         2 Di-nEC~~~~~~c~-~~~C~N---t~Gsy~C~C~~Gy~l~~~~~~C   42 (43)
T d1uzka2           2 DI-DECQELPGLCQ-GGKCIN---TFGSFQCRCPTGYYLNEDTRVC   42 (43)
T ss_dssp             EC-CHHHHCGGGGB-TSEEEE---CSSCEEEECCTTCCBCTTTCBB
T ss_pred             Cc-ccccCCCCCcC-CCEEEC---CCCCeEeECCCCCeECcCCCcc
Confidence            45 888432 2464 579999   9999999999999987644433

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.4e-06  Score=51.14  Aligned_cols=34  Identities=24%  Similarity=0.597  Sum_probs=30.2

Q ss_pred             cccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCC
Q psy9427          13 CWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        13 c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~   48 (324)
                      -+++|..+||.+ ++|++..++|+|.|++| |+|..
T Consensus         7 ~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G-~~G~~   40 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDGIGSFSCDCRSG-WEGRF   40 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCCSSCCCEEECTT-EESTT
T ss_pred             CCCcccCCCCCC-CEEECCCCCCeEeCCCC-CcCCC
Confidence            467899999986 79999999999999999 99953

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=6.1e-06  Score=51.52  Aligned_cols=37  Identities=32%  Similarity=0.622  Sum_probs=33.0

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +++|.++||.+ ++|++..++|+|.|++||+|     ..|+..
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G-----~~Ce~~   44 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSFSCDCRSGWEG-----RFCQRE   44 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCCCEEECTTEES-----TTSCEE
T ss_pred             CCcccCCCCCC-CEEECCCCCCeEeCCCCCcC-----CCcccc
Confidence            68899999986 79999999999999999999     788653

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.76  E-value=6.8e-06  Score=50.79  Aligned_cols=41  Identities=17%  Similarity=0.367  Sum_probs=28.9

Q ss_pred             cCCCCCC---CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDSG---ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      ||||+..   .....+.|+|+.++|+|.|++||++.... ++|+.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~-~tC~~   44 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNK-HTCSA   44 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTS-SCEEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCC-Ccccc
Confidence            5677542   22345799999999999999999976654 66653

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=9e-06  Score=50.21  Aligned_cols=41  Identities=20%  Similarity=0.344  Sum_probs=30.7

Q ss_pred             cCCCCCC---CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427          77 IPACDSG---ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR  118 (324)
Q Consensus        77 i~~C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~  118 (324)
                      ||||+..   .....+.|+|+.++|+|.|++||++.... ++|++
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~-~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNK-RTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTS-SCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCC-CCccC
Confidence            5777643   22346799999999999999999976654 66654

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=5.1e-06  Score=49.80  Aligned_cols=32  Identities=19%  Similarity=0.427  Sum_probs=27.9

Q ss_pred             CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          83 GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      +.|..+|.|+|+.++|.|+|++||+|++   ..|.
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG---~~C~   38 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGNG---RQCV   38 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEECS---SSEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCCC---CEee
Confidence            4577889999999999999999999987   5664

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=9e-06  Score=48.68  Aligned_cols=29  Identities=28%  Similarity=0.558  Sum_probs=25.7

Q ss_pred             CCCCCCCEeeeCCCceeeeeCCCeeecCCC
Q psy9427          20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPN   49 (324)
Q Consensus        20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~   49 (324)
                      +.|..+|.|+|+.++|.|.|++| |.|+..
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~G-y~GdG~   35 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVAN-YTGNGR   35 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTT-EEECSS
T ss_pred             CCCCCCCEeecCCCCeEeECCCC-CcCCCC
Confidence            35888999999999999999999 999753

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.1e-05  Score=51.70  Aligned_cols=41  Identities=17%  Similarity=0.314  Sum_probs=29.7

Q ss_pred             ccCCCCCCCC-C------CCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCC
Q psy9427         118 RESNLCRDSN-P------CHPTARCEDTGATNGKVVCSCPELSVGDPYKTGC  162 (324)
Q Consensus       118 ~~~~~C~~~~-~------C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C  162 (324)
                      || |||+... .      ++..+.|+|   ++|+|+|+|++||++......|
T Consensus         3 Di-dEC~~~~~~c~~~~~~~c~~~C~N---t~GsY~C~C~~Gy~l~~d~~tC   50 (53)
T d1apqa_           3 DL-DECASRSKSGEEDPQPQCQHLCHN---YVGGYFCSCRPGYELQEDRHSC   50 (53)
T ss_dssp             SC-CTTTCSTTTCCCSSSCTTSSEEEE---ETTEEEEECSTTCEECTTSSCE
T ss_pred             ec-ccccCCCCCcccCCCCCccCEeEc---CCCCeEeECCCCCeECCCCCce
Confidence            44 7884432 2      333568999   9999999999999977654444

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.66  E-value=9.2e-06  Score=50.15  Aligned_cols=40  Identities=25%  Similarity=0.391  Sum_probs=28.2

Q ss_pred             CCCCCCC--CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427         121 NLCRDSN--PCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV  163 (324)
Q Consensus       121 ~~C~~~~--~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~  163 (324)
                      |||+..+  .....+.|+|   ++|+|+|+|++||+.....+.|+
T Consensus         2 dEC~~~~~~~~~C~~~C~N---t~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           2 DECRTSLGDSVPCDHYCHN---YLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CTTC-------CCSSEEEE---ETTEEEEECCTTEEECTTSSCEE
T ss_pred             cCCccCCCCcCCCCCEeec---CCCCEEEeCCCCCEECCCCCccc
Confidence            7885432  2333789999   99999999999999876555553

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=1.7e-05  Score=47.86  Aligned_cols=36  Identities=22%  Similarity=0.581  Sum_probs=30.8

Q ss_pred             CCCCCCCCCCCCEEeeC-CCCcEeeCC-CCCcCCCCCCCcccc
Q psy9427          78 PACDSGACGTNAVCIPE-DHRPVCHCP-VGTHPSPSPDVHCAR  118 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~~-~~~~~C~C~-~G~~g~~~~~~~C~~  118 (324)
                      |+|.++||.++++|++. .++|+|.|+ +||+|     ..|+.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G-----~~Ce~   39 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYG-----ENCTT   39 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEET-----TTTCE
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCC-----cCcCc
Confidence            68888999999999975 678999996 69999     77764

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=3.2e-05  Score=46.55  Aligned_cols=31  Identities=26%  Similarity=0.692  Sum_probs=26.7

Q ss_pred             CCCCCCCCCCEeeeC--CCceeeeeCCCeeecCC
Q psy9427          17 CDGVSCGVNAVCVVN--NHEARCFCPPGSYVGDP   48 (324)
Q Consensus        17 C~~~~C~~~~~C~~~--~~~~~C~C~~G~y~g~~   48 (324)
                      |..+||.++|+|+..  .++|+|.|++| |+|..
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g-~~G~~   33 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEG-FAGKS   33 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTT-CBSSS
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCC-CCCCC
Confidence            678899999999964  56799999999 99953

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=7.4e-06  Score=48.93  Aligned_cols=32  Identities=22%  Similarity=0.521  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      |||+...+|  .+.|+|   ++|+|+|.|++||++.+
T Consensus         3 dEC~~~~~C--~~~C~N---~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           3 DECENGGFC--SGVCHN---LPGTFECICGPDSALAG   34 (40)
T ss_dssp             CHHHHCSSC--SSEEEE---CSSSEEEEECSSSSCEE
T ss_pred             cccCCCcCc--cCEeeC---CCCCeEeECCCCCeeCC
Confidence            788555577  579999   99999999999999764

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=1.7e-05  Score=47.33  Aligned_cols=23  Identities=17%  Similarity=0.501  Sum_probs=20.2

Q ss_pred             CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCRAVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~~~~g~y~C~C~~Gy~g  217 (324)
                      +|  .++|+|++|+|+|.|++||+.
T Consensus        10 ~C--~~~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3          10 FC--SGVCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             SC--SSEEEECSSSEEEEECSSSSC
T ss_pred             Cc--cCEeeCCCCCeEeECCCCCee
Confidence            46  368999999999999999985

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.9e-05  Score=45.55  Aligned_cols=38  Identities=32%  Similarity=0.616  Sum_probs=28.7

Q ss_pred             CCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427         121 NLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV  163 (324)
Q Consensus       121 ~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~  163 (324)
                      |||+..  .+|  ...|+|   ++|+|+|.|++||++....+.|+
T Consensus         1 dEC~~~~~~~C--~~~C~n---~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPC--SHFCNN---FIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCS--SSEEEE---ETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCC--CCEeec---CCCCEEEeCCCCCEECCCCCeec
Confidence            466432  357  579999   99999999999999877555553

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00014  Score=48.01  Aligned_cols=42  Identities=17%  Similarity=0.446  Sum_probs=32.8

Q ss_pred             cCCCCCCCCCCCCEEe-----eCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          77 IPACDSGACGTNAVCI-----PEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      .++|..++|.++++|+     +..++|.|.|++||+|     ..|+..+...
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G-----~~Ce~~~~~~   52 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTG-----ARCTENVPMK   52 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEES-----TTSCEECCSS
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCC-----CCcCCCCCcc
Confidence            3566678999999995     4557899999999999     8887653333

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00025  Score=42.69  Aligned_cols=31  Identities=19%  Similarity=0.414  Sum_probs=25.0

Q ss_pred             CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427          84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA  117 (324)
Q Consensus        84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~  117 (324)
                      +|.  +.|+++.++|+|.|++||++.+.. ++|.
T Consensus        10 ~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~-~tC~   40 (42)
T d1nzia2          10 PCS--HFCNNFIGGYFCSCPPEYFLHDDM-KNCG   40 (42)
T ss_dssp             CSS--SEEEEETTEEEEECCTTCEECTTS-SCEE
T ss_pred             CCC--CEeecCCCCEEEeCCCCCEECCCC-Ceec
Confidence            464  699999999999999999986654 5553

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00015  Score=43.20  Aligned_cols=33  Identities=24%  Similarity=0.403  Sum_probs=25.4

Q ss_pred             cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCC
Q psy9427          77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPS  109 (324)
Q Consensus        77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~  109 (324)
                      +|||....-+-...|++++++|+|.|++||++.
T Consensus         2 ~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE
T ss_pred             cccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC
Confidence            467764432234699999999999999999974

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00014  Score=48.14  Aligned_cols=33  Identities=24%  Similarity=0.550  Sum_probs=27.7

Q ss_pred             cCCCCCCCCCCCEee-----eCCCceeeeeCCCeeecCC
Q psy9427          15 NSCDGVSCGVNAVCV-----VNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~y~g~~   48 (324)
                      ++|..+||.++|+|.     +..++|+|.|++| |+|..
T Consensus         7 ~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~g-y~G~~   44 (63)
T d1haea_           7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG-FTGAR   44 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTT-EESTT
T ss_pred             CCCcCCcCCCCCEEeecccccCCCCEEeECCCC-CCCCC
Confidence            557779999999995     4567899999999 99963

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.00068  Score=42.92  Aligned_cols=37  Identities=24%  Similarity=0.600  Sum_probs=29.7

Q ss_pred             CCCCCCCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          78 PACDSGACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      .+|.+++|.++++|+.  ...+|+|.|++||+|     ..|+..
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G-----~~Ce~~   45 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSG-----DRCQTR   45 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTTCCS-----SSSCCC
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCCCcC-----CCCccC
Confidence            3455689999999984  446899999999999     788753

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.00057  Score=43.27  Aligned_cols=32  Identities=31%  Similarity=0.523  Sum_probs=27.0

Q ss_pred             cCCCCCCCCCCCEeee--CCCceeeeeCCCeeecC
Q psy9427          15 NSCDGVSCGVNAVCVV--NNHEARCFCPPGSYVGD   47 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~--~~~~~~C~C~~G~y~g~   47 (324)
                      .+|..++|.++|+|+.  ....|+|.|++| |+|.
T Consensus         7 ~~c~~~~C~NgG~C~~~~~~~~~~C~C~~g-y~G~   40 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIG-YSGD   40 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESSSSCEEEECCTT-CCSS
T ss_pred             CCCCCCCCCCCcEeeccCCCCCeEeECCCC-CcCC
Confidence            4677889999999974  456899999999 9995

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00061  Score=42.20  Aligned_cols=32  Identities=25%  Similarity=0.565  Sum_probs=27.3

Q ss_pred             cCCCCCCCCCCCEeee--CCCceeeeeCCCeeecC
Q psy9427          15 NSCDGVSCGVNAVCVV--NNHEARCFCPPGSYVGD   47 (324)
Q Consensus        15 ~~C~~~~C~~~~~C~~--~~~~~~C~C~~G~y~g~   47 (324)
                      ++|..++|.++|+|+.  ...+|+|.|++| |+|.
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~g-y~G~   38 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVG-YIGE   38 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTT-EEST
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCC-cccC
Confidence            5677889999999975  456899999999 9995

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.65  E-value=0.00039  Score=35.18  Aligned_cols=23  Identities=26%  Similarity=0.645  Sum_probs=21.7

Q ss_pred             cccccCCCCCCCCcccCCccccc
Q psy9427         295 LGCRQNEECSGQMICAGSKCTGW  317 (324)
Q Consensus       295 ~~C~~~~~C~~~~~C~~~~C~np  317 (324)
                      ++|..++||+++++|.|.+|-+|
T Consensus         2 pecvl~sdcpsn~acvnqkcrdp   24 (26)
T d1oiga_           2 PECVLNSDCPSNQACVNQKCRDP   24 (26)
T ss_dssp             CSCCSSTTSSTTCEECSSSEECC
T ss_pred             CceeEcCCCCccHhHhcccccCC
Confidence            67999999999999999999988

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00066  Score=42.04  Aligned_cols=37  Identities=27%  Similarity=0.604  Sum_probs=29.8

Q ss_pred             CCCCCCCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          78 PACDSGACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        78 ~~C~~~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ++|.+++|.++++|+.  ...+|+|.|++||+|     ..|+..
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G-----~~Ce~~   43 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIG-----ERCQYR   43 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEES-----TTSCEE
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCccc-----CCCCcC
Confidence            4566688999999985  446799999999999     788753

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00043  Score=41.13  Aligned_cols=31  Identities=29%  Similarity=0.592  Sum_probs=23.1

Q ss_pred             ccCCCCC--CCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427          14 WNSCDGV--SCGVNAVCVVNNHEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~~--~C~~~~~C~~~~~~~~C~C~~G~y~g~   47 (324)
                      +|+|..+  .|.  -.|++++++|+|.|++| |...
T Consensus         2 ~neC~~~nggC~--h~C~n~~g~~~C~C~~G-y~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCS--HVCNDLKIGYECLCPDG-FQLV   34 (40)
T ss_dssp             SCGGGTGGGGCS--SEEEECSSSEEEECCTT-CCEE
T ss_pred             cccCCCCCCCCc--CEEEcCCCCEEEECCCC-CEEC
Confidence            3556543  354  38999999999999999 7643

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0013  Score=37.06  Aligned_cols=33  Identities=27%  Similarity=0.683  Sum_probs=26.3

Q ss_pred             cCCC-CCCCCCCCEeeeCCCceeeeeCCCeeecCCC
Q psy9427          15 NSCD-GVSCGVNAVCVVNNHEARCFCPPGSYVGDPN   49 (324)
Q Consensus        15 ~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~   49 (324)
                      |+|+ .+||++ ++|.|..|.|.|.|.+| |..-|.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~G-Fepgpm   35 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEG-FEPGPM   35 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSS-SCCCSS
T ss_pred             CccccCCccCC-ceeeecccceEEeecCC-cCCCcc
Confidence            4554 479986 59999999999999999 865443

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0019  Score=40.25  Aligned_cols=30  Identities=20%  Similarity=0.464  Sum_probs=26.6

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ..|+++.++|+|.|++||++.... ++|+.+
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~-~tC~~~   40 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDL-LQCHPA   40 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTS-SCEEEC
T ss_pred             cEeecCCCCeEEECCCCCEECCCC-CccccC
Confidence            689999999999999999987665 888876

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0018  Score=36.44  Aligned_cols=33  Identities=30%  Similarity=0.716  Sum_probs=28.1

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427         121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP  157 (324)
Q Consensus       121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~  157 (324)
                      |||+..+||. +++|.|   ..|.|.|.|..||..-+
T Consensus         2 dECsignpCG-nGTCtN---viGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKN---VIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEE---CSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-Cceeee---cccceEEeecCCcCCCc
Confidence            7787788996 789999   99999999999996433

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.76  E-value=0.0024  Score=39.93  Aligned_cols=33  Identities=18%  Similarity=0.381  Sum_probs=28.0

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC  123 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C  123 (324)
                      ..|+++.++|.|.|++||++.+.. ++|+++ +++
T Consensus        10 h~C~~~~~~~~C~C~~Gy~L~~D~-~tC~~~-~~~   42 (51)
T d1kigl_          10 QFCREERSEVRCSCAHGYVLGDDS-KSCVST-ERF   42 (51)
T ss_dssp             SCCCEETTEECCCCCTTEEECTTS-SCEEEC-SSS
T ss_pred             cEeEcCCCcEEeEcCCCCEECCCC-CccccC-Ccc
Confidence            578899999999999999987665 889887 665

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0032  Score=39.11  Aligned_cols=33  Identities=24%  Similarity=0.284  Sum_probs=28.5

Q ss_pred             CCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQ  167 (324)
Q Consensus       132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~e  167 (324)
                      ...|++   ++++|+|.|+.||++....+.|.++.+
T Consensus        10 ~~~C~~---~~g~~~C~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2          10 THYCLE---EVGWRRCSCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             SSEEEE---CSSSEEEECCTTEEECTTSSCEEECSS
T ss_pred             ccEeec---CCCCeEEECCCCCEECCCCCccccCCC
Confidence            578999   999999999999999887778876654

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0038  Score=38.93  Aligned_cols=30  Identities=23%  Similarity=0.511  Sum_probs=26.6

Q ss_pred             CEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ..|+++.++|+|.|++||++.+.. ++|+.+
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~-~tC~~~   41 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNG-KACIPT   41 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTS-SCEEES
T ss_pred             cEeecCCCCeEeEcCCCCEECCCC-CccccC
Confidence            689999999999999999987655 889877

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.47  E-value=0.0022  Score=40.12  Aligned_cols=34  Identities=24%  Similarity=0.446  Sum_probs=29.6

Q ss_pred             CCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ...|++   ++++|+|.|++||++......|++++++
T Consensus         9 ~h~C~~---~~~~~~C~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           9 DQFCRE---ERSEVRCSCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             SSCCCE---ETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred             ccEeEc---CCCcEEeEcCCCCEECCCCCccccCCcc
Confidence            567899   9999999999999988877889888766

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.004  Score=38.85  Aligned_cols=34  Identities=26%  Similarity=0.584  Sum_probs=29.0

Q ss_pred             CCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ...|++   ++++|+|.|++||.+....++|.+.++.
T Consensus        11 ~h~C~n---~~g~~~C~C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1          11 DQFCHE---EQNSVVCSCARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             SSEEEE---ETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             ccEeec---CCCCeEeEcCCCCEECCCCCccccCCcc
Confidence            578999   9999999999999988877788876543

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.05  Score=34.41  Aligned_cols=30  Identities=20%  Similarity=0.532  Sum_probs=25.0

Q ss_pred             CEEeeCC-CCcEeeCCCCCcCCCCCCCccccc
Q psy9427          89 AVCIPED-HRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        89 ~~C~~~~-~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ..|+++. ++|+|.|++||.+.+.. +.|+.+
T Consensus        12 h~C~~~~~~~~~C~C~~Gy~L~~D~-~tC~~~   42 (57)
T d1rfnb_          12 QFCKNSADNKVVCSCTEGYRLAENQ-KSCEPA   42 (57)
T ss_dssp             SEEEECTTSCEEEECCTTEEECTTS-SSEEEC
T ss_pred             cEeeeCCCCCeEeECCCCCEECCCC-CccccC
Confidence            6899885 48999999999987655 889876

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.046  Score=33.60  Aligned_cols=27  Identities=26%  Similarity=0.698  Sum_probs=20.2

Q ss_pred             CEEe------eCCCCcEeeCCCCCcCCCCCCCcc
Q psy9427          89 AVCI------PEDHRPVCHCPVGTHPSPSPDVHC  116 (324)
Q Consensus        89 ~~C~------~~~~~~~C~C~~G~~g~~~~~~~C  116 (324)
                      ..|+      +..++|+|.|+.||++.+.. ++|
T Consensus        16 h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~-~tC   48 (50)
T d1ijqa2          16 YLCLPAPQINPHSPKFTCACPDGMLLARDM-RSC   48 (50)
T ss_dssp             SEEEECCCCSTTCCSEEEECCTTCEECTTS-SCE
T ss_pred             CccCCCcCcccCCCCEEEeCCCCCEECCCC-Ccc
Confidence            5786      34578999999999986643 444

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.045  Score=33.63  Aligned_cols=31  Identities=19%  Similarity=0.404  Sum_probs=22.0

Q ss_pred             CCeeecCC---CCCCCeeeeCCCCCccCCCCCCC
Q psy9427         132 TARCEDTG---ATNGKVVCSCPELSVGDPYKTGC  162 (324)
Q Consensus       132 ~~~C~~~~---~~~g~~~C~C~~G~~g~~~~~~C  162 (324)
                      ...|+..+   .+.++|+|.|+.||++....+.|
T Consensus        15 ~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tC   48 (50)
T d1ijqa2          15 QYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC   48 (50)
T ss_dssp             SSEEEECCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred             cCccCCCcCcccCCCCEEEeCCCCCEECCCCCcc
Confidence            57886310   15689999999999988755444

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.22  E-value=0.029  Score=34.55  Aligned_cols=25  Identities=20%  Similarity=0.533  Sum_probs=21.1

Q ss_pred             CCCCCCeee-eCCCCceeeCCCCCcc
Q psy9427         193 ACGPNALCR-AVGKRPVCACPDGFSA  217 (324)
Q Consensus       193 ~C~~~~~C~-~~~g~y~C~C~~Gy~g  217 (324)
                      .|.+++.|. .....++|.|+.||+|
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~G   40 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYIG   40 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEET
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCee
Confidence            688888885 5566799999999998

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.96  E-value=0.051  Score=33.38  Aligned_cols=32  Identities=22%  Similarity=0.469  Sum_probs=26.1

Q ss_pred             CCCCCCCEEe-eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          83 GACGTNAVCI-PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        83 ~~C~~~~~C~-~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.|.+++.|. .....+.|.|+.||+|     ..|+.+
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~G-----~rCe~~   46 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYIG-----ARCERV   46 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEET-----TTTCEE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCee-----CCCccc
Confidence            5788888885 4556799999999999     788765

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.064  Score=32.26  Aligned_cols=32  Identities=31%  Similarity=0.680  Sum_probs=24.5

Q ss_pred             CCCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          82 SGACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        82 ~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      .+.|.+ +.|.  .....+.|.|++||+|     .+|+.+
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~C~~gY~G-----~RCe~~   44 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCRCEVGYTG-----VRCEHF   44 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEEECTTCSS-----TTSCCC
T ss_pred             CCcCcC-CEEEEeCCCCccEeECCCCcee-----cCceee
Confidence            367876 6775  4556799999999999     777654

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.39  E-value=0.088  Score=32.67  Aligned_cols=30  Identities=20%  Similarity=0.464  Sum_probs=24.0

Q ss_pred             CEEeeCCC-CcEeeCCCCCcCCCCCCCccccc
Q psy9427          89 AVCIPEDH-RPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        89 ~~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      ..|+++.+ +|.|.|+.||++.+.. ++|...
T Consensus        11 h~C~~~~~~~~~C~C~~Gy~L~~D~-~tC~~~   41 (53)
T d2bz6l1          11 QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT   41 (53)
T ss_dssp             SEEEEETTTEEEEECCTTEEECTTS-SCEEEC
T ss_pred             CEeeeCCCCCEEeECCCCCEECCCC-CcccCC
Confidence            58988765 5899999999986654 788765

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.083  Score=33.32  Aligned_cols=34  Identities=29%  Similarity=0.508  Sum_probs=27.6

Q ss_pred             CCeeecCCCCC-CCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427         132 TARCEDTGATN-GKVVCSCPELSVGDPYKTGCVPQGQC  168 (324)
Q Consensus       132 ~~~C~~~~~~~-g~~~C~C~~G~~g~~~~~~C~~~~eC  168 (324)
                      ...|++   ++ ++|+|.|+.||++....+.|.++++.
T Consensus        11 ~h~C~~---~~~~~~~C~C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_          11 EQFCKN---SADNKVVCSCTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             SSEEEE---CTTSCEEEECCTTEEECTTSSSEEECSSS
T ss_pred             ccEeee---CCCCCeEeECCCCCEECCCCCccccCCCc
Confidence            578988   76 47999999999998877788876643

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.63  E-value=0.16  Score=30.44  Aligned_cols=28  Identities=29%  Similarity=0.612  Sum_probs=21.8

Q ss_pred             CCCCCCCCEee--eCCCceeeeeCCCeeecCC
Q psy9427          19 GVSCGVNAVCV--VNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        19 ~~~C~~~~~C~--~~~~~~~C~C~~G~y~g~~   48 (324)
                      .++|.+ |.|.  .....++|.|++| |+|+.
T Consensus        11 ~~yC~n-G~C~~~~~~~~~~C~C~~g-Y~G~R   40 (46)
T d1k36a_          11 NGYCLH-GQCIYLVDMSQNYCRCEVG-YTGVR   40 (46)
T ss_dssp             CSSCSS-EEEEEETTTTEEEEEECTT-CSSTT
T ss_pred             CCcCcC-CEEEEeCCCCccEeECCCC-ceecC
Confidence            368987 6785  4567899999999 99963

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.17  E-value=0.076  Score=32.37  Aligned_cols=32  Identities=19%  Similarity=0.508  Sum_probs=25.4

Q ss_pred             CCCCCCCEEe-eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          83 GACGTNAVCI-PEDHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        83 ~~C~~~~~C~-~~~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      +.|.+++.|. .....+.|.|++||+|     .+|+..
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~G-----~RCe~~   45 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYVG-----ARCEHA   45 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEES-----TTSCEE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCEe-----cCCccc
Confidence            5688877774 4456799999999999     888765

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.83  E-value=0.17  Score=30.70  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=22.2

Q ss_pred             CCCCCCCEee-eCCCceeeeeCCCeeecCC
Q psy9427          20 VSCGVNAVCV-VNNHEARCFCPPGSYVGDP   48 (324)
Q Consensus        20 ~~C~~~~~C~-~~~~~~~C~C~~G~y~g~~   48 (324)
                      +.|.+++.|. .....++|.|++| |+|..
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~g-y~G~R   41 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSG-YVGAR   41 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTT-EESTT
T ss_pred             CEeeCCeEEecCCCCCcEeECCCC-CEecC
Confidence            5688888775 4467899999999 99953

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.062  Score=30.96  Aligned_cols=32  Identities=25%  Similarity=0.725  Sum_probs=21.6

Q ss_pred             cCCCcc-CCCCCCeeeeC-CCCceeeCCCCCccCCC
Q psy9427         187 VSVCQG-ACGPNALCRAV-GKRPVCACPDGFSAVGG  220 (324)
Q Consensus       187 ~d~C~~-~C~~~~~C~~~-~g~y~C~C~~Gy~g~~~  220 (324)
                      +|+|.. .|..  .|... .+.|+|.|.+||...+.
T Consensus         4 vDPCf~~~CE~--qCqP~~~~~Y~CiCaeGFaP~p~   37 (43)
T d1dx5i1           4 VDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH   37 (43)
T ss_dssp             CCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT
T ss_pred             cccccCCCcce--eeeeCCCCcceEEeccccccCCC
Confidence            345544 5643  47744 56899999999987443

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.99  E-value=0.34  Score=27.76  Aligned_cols=31  Identities=19%  Similarity=0.493  Sum_probs=24.2

Q ss_pred             ccCCCCCCCCCCCEeeeC-CCceeeeeCCCeeecC
Q psy9427          14 WNSCDGVSCGVNAVCVVN-NHEARCFCPPGSYVGD   47 (324)
Q Consensus        14 ~~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~y~g~   47 (324)
                      +|||...+|.-  .|... .+.|.|+|.+| |...
T Consensus         4 vDPCf~~~CE~--qCqP~~~~~Y~CiCaeG-FaP~   35 (43)
T d1dx5i1           4 VDPCFRANCEY--QCQPLDQTSYLCVCAEG-FAPI   35 (43)
T ss_dssp             CCGGGGCCCSS--EEEECSSSCEEEECCTT-EEEE
T ss_pred             cccccCCCcce--eeeeCCCCcceEEeccc-cccC
Confidence            67888888864  78754 66899999999 8753

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.94  E-value=0.18  Score=31.20  Aligned_cols=32  Identities=28%  Similarity=0.454  Sum_probs=25.1

Q ss_pred             CCeeecCCCCCC-CeeeeCCCCCccCCCCCCCCCCC
Q psy9427         132 TARCEDTGATNG-KVVCSCPELSVGDPYKTGCVPQG  166 (324)
Q Consensus       132 ~~~C~~~~~~~g-~~~C~C~~G~~g~~~~~~C~~~~  166 (324)
                      ...|++   +++ +|+|.|+.||+......+|....
T Consensus        10 ~h~C~~---~~~~~~~C~C~~Gy~L~~D~~tC~~~~   42 (53)
T d2bz6l1          10 EQYCSD---HTGTKRSCRCHEGYSLLADGVSCTPTV   42 (53)
T ss_dssp             SSEEEE---ETTTEEEEECCTTEEECTTSSCEEECS
T ss_pred             cCEeee---CCCCCEEeECCCCCEECCCCCcccCCC
Confidence            578988   765 68999999999887777776543

>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: DPY module
family: DPY module
domain: Dumpy
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=84.17  E-value=0.31  Score=24.20  Aligned_cols=20  Identities=30%  Similarity=0.999  Sum_probs=9.6

Q ss_pred             CCCCCCCCCCCcccCCcccC
Q psy9427         255 CLSHSDCSEGERCISSLCQS  274 (324)
Q Consensus       255 C~~~~~C~~~~~C~~~~C~~  274 (324)
                      |.-+.+|..+++|++..|++
T Consensus         4 cvl~sdcpsn~acvnqkcrd   23 (26)
T d1oiga_           4 CVLNSDCPSNQACVNQKCRD   23 (26)
T ss_dssp             CCSSTTSSTTCEECSSSEEC
T ss_pred             eeEcCCCCccHhHhcccccC
Confidence            33444445555555555544

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.53  E-value=0.65  Score=25.92  Aligned_cols=30  Identities=23%  Similarity=0.668  Sum_probs=23.1

Q ss_pred             CCCCCEEeeC---CCCcEeeCCCCCcCCCCCCCccccc
Q psy9427          85 CGTNAVCIPE---DHRPVCHCPVGTHPSPSPDVHCARE  119 (324)
Q Consensus        85 C~~~~~C~~~---~~~~~C~C~~G~~g~~~~~~~C~~~  119 (324)
                      |.++++|+.-   .+-.+|.||.+|.|     ..|+.+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G-----~HCEiD   36 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGG-----QHCEID   36 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEES-----TTSCEE
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCc-----eeEEec
Confidence            6788899843   34568999999999     778754

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.33  E-value=0.9  Score=25.32  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=21.0

Q ss_pred             CCCCCEeeeC---CCceeeeeCCCeeecCC
Q psy9427          22 CGVNAVCVVN---NHEARCFCPPGSYVGDP   48 (324)
Q Consensus        22 C~~~~~C~~~---~~~~~C~C~~G~y~g~~   48 (324)
                      |.++++|+.-   ..-..|.||.+ |.|..
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~-f~G~H   32 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKK-FGGQH   32 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTT-EESTT
T ss_pred             cccCCEEEEEehhcCCEEecCCcc-cCcee
Confidence            8899999853   55668999999 99853