Psyllid ID: psy9508


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-
MIFVTSAHEEFTEKTPERVKPQRRRTWTKQDGEIYFQTTSATEFTEHSTTDLRQAQVRHVDNLKTGGTFEGKPKDDYMPVTAERPKQQKPKDNLRPEGDFERPTKVTPEKGERPKAIKPKDNLKPEGEFERPVKEPLGPADRAPIIKHPDNLKLEGDFEDKPRPKAPERGERAPIRKPKDNLYPEGDFERPEHQEYKKGERPTAYKPHDNLKPEGEFERPIKEKPKQAERVEPFKVRDNLKTEGEFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQGERVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQAERVEAFKMKDNLKPEGDFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPGFQKGERPKAFKPHDNLKPEGDFERPVKEKPKQAEKVEAFKMKDNLKHSC
ccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
MIFVTSAheeftektpervkpqrrrtwtkqdgeiyfqttsateftehsttDLRQAQVRHvdnlktggtfegkpkddympvtaerpkqqkpkdnlrpegdferptkvtpekgerpkaikpkdnlkpegeferpvkeplgpadrapiikhpdnlklegdfedkprpkapergerapirkpkdnlypegdferpehqeykkgerptaykphdnlkpegeferpikekpkqaervepfkvrdnlktegefegrpkddygpkvgdrapvkkpqdnlypegeferpeypefqkaerpkafkphdnlkpegdferpvkekpkqgervepikvrdnlkpegefegrpkddygpkigdrapvkkpqdnlypegeferpeypefqkaerpkafkphdnlkpegdferpvkekpkQAERVEAFKmkdnlkpegdfegrpkddygpkvgdrapvkkpqdnlypegeferpeypgfqkgerpkafkphdnlkpegdferpvkekpkQAEKVEAFKMKDNLKHSC
mifvtsaheeftektpervkpqrrrtwtkqdgeiyfqttsateftehsttDLRQAQVRHVDnlktggtfegkpkddympvtaerpkqqkpkdnlrpegdferptkvtpekgerpkaikpkdnlkpegeferpvkeplgpadrapiikhpdnlklegdfedkprpkapergerapirkpkdnlypegdferpehqeykkgerptaykphdnlkpegeferpikekpkqaervepfkvrdnlktegefegrpkddygpkvgdrapvkkpqdnlypegefERPEYPEFQKaerpkafkphdnlkpegdferpvkekpkqgervepikvrdnlkpegefegrpkddygpkigdrapvkkpqdnlypegefERPEYPEFQKaerpkafkphdnlkpegdferpvkekpkqaerveafkmkdnlkpegdfegrpkddygpkvgdrapvkkpqdnlypegeferPEYPGFQKgerpkafkphdnlkpegdferpvkekpkqaekveafkmkdnlkhsc
MIFVTSAHEEFTEKTPERVKPQRRRTWTKQDGEIYFQTTSATEFTEHSTTDLRQAQVRHVDNLKTGGTFEGKPKDDYMPVTAERPKQQKPKDNLRPEGDFERPTKVTPEKGERPKAIKPKDNLKPEGEFERPVKEPLGPADRAPIIKHPDNLKLEGDFEDKPRPKAPERGERAPIRKPKDNLYPEGDFERPEHQEYKKGERPTAYKPHDNLKPEGEFERPIKEKPKQAERVEPFKVRDNLKTEGEFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQGERVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQAERVEAFKMKDNLKPEGDFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPGFQKGERPKAFKPHDNLKPEGDFERPVKEKPKQAEKVEAFKMKDNLKHSC
*********************************IYFQ******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
MIFVTSAH******************WTKQDGEIYFQTTSATE*********RQAQVRHVDNLKTGGTFEGKPKDDYMPVTAERPKQQKPKDNLRPEGDFERPTKVTPEKGERPKAIKPKDNLKPEGEFERPVKEPLGPADRAPIIKHPDNLKLEGDFEDKPRPKAPERGERAPIRKPKDNLYPEGDFERPEHQEYKKGERPTAYKPHDNLKPEGEFERPIKEKPKQAERVEPFKVRDNLKTEGEFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFE***********RVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQAERVEAFKMKDNLKPEGDFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPGFQKGERPKAFKPHDNLKPEGDFERPVKEKPKQAEKVEAFKMKDNLKHSC
*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MIFVTSAHEEFTEKTPERVKPQRRRTWTKQDGEIYFQTTSATEFTEHSTTDLRQAQVRHVDNLKTGGTFEGKPKDDYMPVTAERPKQQKPKDNLRPEGDFERPTKVTPEKGERPKAIKPKDNLKPEGEFERPVKEPLGPADRAPIIKHPDNLKLEGDFEDKPRPKAPERGERAPIRKPKDNLYPEGDFERPEHQEYKKGERPTAYKPHDNLKPEGEFERPIKEKPKQAERVEPFKVRDNLKTEGEFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQGERVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLYPEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQAERVEAFKMKDNLKPEGDFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPGFQKGERPKAFKPHDNLKPEGDFERPVKEKPKQAEKVEAFKMKDNLKHSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
328723682 2678 PREDICTED: hypothetical protein LOC10016 0.982 0.187 0.480 1e-131
189238710 3589 PREDICTED: similar to AGAP009638-PA [Tri 0.974 0.138 0.480 1e-107
332027423 4565 hypothetical protein G5I_03899 [Acromyrm 0.888 0.099 0.481 1e-100
307197722 3886 hypothetical protein EAI_02279 [Harpegna 0.872 0.114 0.464 2e-99
340728676 3856 PREDICTED: hypothetical protein LOC10065 0.870 0.115 0.514 1e-97
328789723 4040 PREDICTED: hypothetical protein LOC40867 0.870 0.110 0.540 1e-96
170030352 3683 conserved hypothetical protein [Culex qu 0.866 0.120 0.519 4e-94
322796140 1875 hypothetical protein SINV_04687 [Solenop 0.982 0.267 0.434 3e-93
350415652 4859 PREDICTED: hypothetical protein LOC10074 0.870 0.091 0.517 4e-93
158298502 3551 AGAP009638-PA [Anopheles gambiae str. PE 0.864 0.124 0.487 7e-93
>gi|328723682|ref|XP_003247917.1| PREDICTED: hypothetical protein LOC100160459 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 314/654 (48%), Positives = 373/654 (57%), Gaps = 152/654 (23%)

Query: 1   MIFVTSAHEEFTEKTPERVKPQRRRTWTKQDGEIYFQTTSATEFTEHSTTDLRQAQVRHV 60
           M F TS   +++ KT E  KP RRRTWTKQDGEIYFQTT++  F +H+ T++RQ   +H 
Sbjct: 1   MSFETSRMADYSAKTVELEKPVRRRTWTKQDGEIYFQTTTSEVFKQHNETNIRQTIKKHT 60

Query: 61  DNLKTGGTFEG-------------------KPKDDYMPVT------------AERPKQQK 89
           DN+   G F+                    KP D+  P              +ERPKQ K
Sbjct: 61  DNITIEGKFDDRTHSKEQFKNIQAERPIQKKPIDNLKPEGEFDRPQKEKYKPSERPKQIK 120

Query: 90  PKDNLRPEGDFERPTKVTPEKGERPKAIKPKDNLKPEGEFERPVKEPLGPADRAPIIKHP 149
           P DNL+PEG+FERP +   + GERPK IKP+DNLK EGEFERP++E   P++R    K  
Sbjct: 121 PTDNLKPEGNFERPKQKDYKTGERPKQIKPQDNLKSEGEFERPIEEKYEPSERPSPFKPS 180

Query: 150 DNLKLEGDFE----------DKPRP---------------KAPER---GERAPIRKPKDN 181
           DNLK EGDF+          ++P P               + P++   G+RAPI KPKDN
Sbjct: 181 DNLKPEGDFDRPKNEKYKPGERPTPFKPSDNLKPEGEFEKRTPQKVGPGDRAPIVKPKDN 240

Query: 182 LYPEGD-----------------------------FERPEHQEYKKGERPTAYKPHDNLK 212
           LYPEG+                             FERPE  EY   ERP  +KP DNLK
Sbjct: 241 LYPEGEFQRPKPDEFQPSERPKQVKPQDNLFPEGSFERPELPEYSPSERPKQFKPTDNLK 300

Query: 213 PEGEFERPIKEKPKQAERVEPFKVRDNLKTEGEFEGRPKDDYGPKVGDRAPVKKPQDNLY 272
           PEG+FERP+ EK + +ER   FK  DNLK EGEFE R     GP  GDRAP+ KP+DNLY
Sbjct: 301 PEGDFERPVYEKFRPSERPAAFKPSDNLKPEGEFEKRTPQKVGP--GDRAPIVKPKDNLY 358

Query: 273 PEGEFE-----------------------------RPEYPEFQKAERPKAFKPHDNLKPE 303
           PEGEF+                             RPE PE+  +ERPK FKP DNLKPE
Sbjct: 359 PEGEFQRPKPDDYRPSEKPKQVKPQDNLFPEGSFDRPELPEYSPSERPKQFKPTDNLKPE 418

Query: 304 GDFERPVKEKPKQGERVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLYPE 363
           GDFERPV EK +  ER    K  DNLKPEGEFE R     GP  GDRAP+ KP+DNLYPE
Sbjct: 419 GDFERPVYEKFRPSERPAAFKPSDNLKPEGEFEKRTPQKVGP--GDRAPIVKPKDNLYPE 476

Query: 364 GEFE-----------------------------RPEYPEFQKAERPKAFKPHDNLKPEGD 394
           GEF+                             RPE PE+  +ERPK FKP DNLKPEGD
Sbjct: 477 GEFQRPKPDDYQPSERPKQVKPQDNLFPEGSFDRPELPEYSPSERPKQFKPTDNLKPEGD 536

Query: 395 FERPVKEKPKQAERVEAFKMKDNLKPEGDFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGE 454
           FERPV EK + +ER  AFK  DNLKPEG+FE R     GP  GDRAP+ KP+DNL+PEG 
Sbjct: 537 FERPVYEKFQPSERPAAFKPSDNLKPEGEFEKRTPQKVGP--GDRAPIVKPKDNLFPEGN 594

Query: 455 FERPEYPGFQKGERPKAFKPHDNLKPEGDFERPVKEKPKQAEKVEAFKMKDNLK 508
           FERPEYP +   ERPK FKP DNLKPEGDF+RPV EK + +E+  A+K  DNLK
Sbjct: 595 FERPEYPEYSPSERPKQFKPTDNLKPEGDFDRPVHEKFRPSERPAAYKPSDNLK 648




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238710|ref|XP_969341.2| PREDICTED: similar to AGAP009638-PA [Tribolium castaneum] gi|270010078|gb|EFA06526.1| hypothetical protein TcasGA2_TC009430 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332027423|gb|EGI67506.1| hypothetical protein G5I_03899 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307197722|gb|EFN78871.1| hypothetical protein EAI_02279 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|340728676|ref|XP_003402645.1| PREDICTED: hypothetical protein LOC100650708 [Bombus terrestris] Back     alignment and taxonomy information
>gi|328789723|ref|XP_392215.4| PREDICTED: hypothetical protein LOC408677 [Apis mellifera] Back     alignment and taxonomy information
>gi|170030352|ref|XP_001843053.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167866945|gb|EDS30328.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|322796140|gb|EFZ18716.1| hypothetical protein SINV_04687 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|350415652|ref|XP_003490707.1| PREDICTED: hypothetical protein LOC100747732 [Bombus impatiens] Back     alignment and taxonomy information
>gi|158298502|ref|XP_318671.4| AGAP009638-PA [Anopheles gambiae str. PEST] gi|157013913|gb|EAA13867.5| AGAP009638-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
UNIPROTKB|F1PZZ31061 NEFH "Uncharacterized protein" 0.915 0.441 0.248 1.5e-18
UNIPROTKB|J9P0101017 NEFH "Uncharacterized protein" 0.796 0.400 0.264 1.8e-18
UNIPROTKB|J9P5151135 NEFH "Uncharacterized protein" 0.919 0.414 0.241 5.9e-18
UNIPROTKB|G4N324797 MGG_07656 "Chitosanase" [Magna 0.882 0.565 0.294 7.2e-18
UNIPROTKB|F1PNP21143 NEFH "Uncharacterized protein" 0.923 0.412 0.244 2.7e-17
UNIPROTKB|F1MSQ61082 NEFH "Uncharacterized protein" 0.894 0.422 0.243 4.2e-17
MGI|MGI:973091090 Nefh "neurofilament, heavy pol 0.798 0.374 0.251 4.1e-16
RGD|31591072 Nefh "neurofilament, heavy pol 0.898 0.428 0.241 1.1e-15
UNIPROTKB|P168841072 Nefh "Neurofilament heavy poly 0.898 0.428 0.241 1.1e-15
UNIPROTKB|F1LRZ71064 Nefh "Neurofilament heavy poly 0.788 0.378 0.248 1.4e-15
UNIPROTKB|F1PZZ3 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 257 (95.5 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 128/515 (24%), Positives = 226/515 (43%)

Query:    14 KTPERVK-PQRRRTWTKQDGEIYFQTTSATEFTEHSTTDLRQAQVRHVDNLKTGGTFEGK 72
             K+P  VK P++ ++  K++ +   +  S     E + + +++ + +  +  K+    E K
Sbjct:   557 KSPTEVKSPEKAKSPAKEEAKSPVEAKSP----EKAKSPVKE-EAKSPEKAKSPVKEEAK 611

Query:    73 -PKDDYMPVTAERPKQQKPKDNLRPEGDFERPTKV---TPEKGERP---KAIKPKDNLKP 125
              P+    PV  E    +K K  ++ E   + P K    +PEK + P   +A  P+    P
Sbjct:   612 SPEKAKSPVKEEAKSPEKAKSPVKEEA--KSPVKEEAKSPEKTKSPVKEEAKSPEKAKSP 669

Query:   126 EGEFERPVKEPLGPADRAPI-IKHPDNLKLEGDFEDKPRPKAPERGERAPIRKPKDNLYP 184
             E + + PVKE     ++A   +K       +     K   K+PE+  ++P+++   +  P
Sbjct:   670 E-KAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKKAKSPVKEEAKS--P 726

Query:   185 EGDFERPEHQEYKKGERPTAYKPHDNLKPEGEFERPIKEKPKQAERVEPFKVRDNLKTEG 244
             E   + P  +E K  E+  +    +   PE + + P+KE+ K  E+ +   V++  K+  
Sbjct:   727 E-KAKSPVKEEAKSPEKAKSPVKEEAKSPE-KAKSPVKEEAKSPEKAKS-PVKEEAKSPE 783

Query:   245 EFEGRPKDDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPEFQKA-ERPKAFKPHDNLKPE 303
             + +   K     K   ++P K            E  + PE  K+ E+ K+    +   PE
Sbjct:   784 KAKSPEKAKSPVKEEAKSPEKAKSPEKAKSPVKEEAKSPEKAKSPEKVKSPVKEETKAPE 843

Query:   304 GDFERPVKEK-P-KQGERVEPIKVRDNLKPEGEFEGRPKDDYGPKIGDRAPVKKPQDNLY 361
              +  +  + K P K+ E+ + +KV++  K + E E  P     PK  ++   KK +    
Sbjct:   844 KEVTKKEEAKSPIKEEEKPQEVKVKEPAK-KAEEEKAPAT---PKTEEKKDSKKDE---V 896

Query:   362 PEGEFERPEYPEFQKAERPKAFKPHDNLKPEGDFERPVKEKPKQAERVEAFKMKDNLKPE 421
             P+ E  +PE PE  K E P   KP ++ K E   E   K+K    E+    K+K+  KP+
Sbjct:   897 PKKEAPKPEVPE--KKE-PAVEKPKES-KVEAKKETEDKKKAVTPEKEVPAKVKEEAKPK 952

Query:   422 GDFEGRPK--DDYGPKVGDRAPVKKPQDNLYPEGEFERPEYPGFQKGERPKAFKPHDNLK 479
                E   K  DD   K   +A  K+P+     EG    PE    ++ + P+A K  +  K
Sbjct:   953 EKAEVAKKEQDDAKAKEPSKAAEKEPEKPK-KEGTPAAPEKKDVKEEKTPEAKKSEEKPK 1011

Query:   480 PEGDF-ERPVKEKP-------KQAEKVEAFKMKDN 506
              E    E P KE P       ++AEK  +   KD+
Sbjct:  1012 AEAPAKEEPSKEAPTPGKAKTEKAEKSSSTDQKDS 1046


GO:0005882 "intermediate filament" evidence=IEA
UNIPROTKB|J9P010 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9P515 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G4N324 MGG_07656 "Chitosanase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|F1PNP2 NEFH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MSQ6 NEFH "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:97309 Nefh "neurofilament, heavy polypeptide" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3159 Nefh "neurofilament, heavy polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P16884 Nefh "Neurofilament heavy polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRZ7 Nefh "Neurofilament heavy polypeptide" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 511
PF05217215 STOP: STOP protein; InterPro: IPR007882 Neurons co 95.43
PF05217215 STOP: STOP protein; InterPro: IPR007882 Neurons co 95.25
>PF05217 STOP: STOP protein; InterPro: IPR007882 Neurons contain abundant subsets of highly stable microtubules that resist de-polymerising conditions such as exposure to the cold Back     alignment and domain information
Probab=95.43  E-value=0.34  Score=45.99  Aligned_cols=37  Identities=35%  Similarity=0.664  Sum_probs=21.0

Q ss_pred             CCCCccCC-CCCCCCCCCCCCCC--CCCCCCCCCCCcccc
Q psy9508         420 PEGDFEGR-PKDDYGPKVGDRAP--VKKPQDNLYPEGEFE  456 (511)
Q Consensus       420 peG~F~~~-~k~~y~pK~~eRp~--~~kP~DNL~peG~F~  456 (511)
                      +.+.|.+. .+.+|.++.+++..  .++....+.+...|.
T Consensus       165 ~~~pF~~~T~~~~y~~~~~~~~~~~~~~~~~~~~~~~~F~  204 (215)
T PF05217_consen  165 PSGPFDGTTYQSDYQPKQGEPAKSPCKPTSQPPQPSPSFQ  204 (215)
T ss_pred             CCCcccCCccccccCCCCCCcccccccCccCCCCcCcCcc
Confidence            45556332 56788888888777  333344444444444



Stable microtubules are thought to be essential for neuronal development, maintenance, and function. STOP is a major factor responsible for the intriguing stability properties of neuronal microtubules and is important for synaptic plasticity. STOPs (for stable tubule only polypeptides) are calmodulin-binding and calmodulin-regulated proteins which, in mammals, are encoded by a single gene but exhibit substantial cell specific variability due to mRNA splicing and alternative promoter use. STOP microtubule stabilising activity has been ascribed to two classes of new bifunctional calmodulin- and microtubule-binding motifs, with distinct microtubule binding properties in vivo. STOPs seem to be restricted to vertebrates and are composed of a conserved domain split by the apparent insertion of variable sequences that are completely unrelated among species []. N-STOP (for neuronal adult STOP) contains two repeat domains. The central repeat domain is composed of five repeated sequences of 46 amino acids. These sequences are almost completely identical, exhibiting an unusual degree of conservation of the repeat motif, compared to repeated sequences in other microtubule-associated proteins. The carboxy-terminal repeat domain is composed of 28 imperfect repeats of an 11 amino acid consensus sequence. Upstream of the carboxy-terminal repeat domain, rat N-STOP contains a highly basic sequence (called the "KR domain" after its high content in lysine and arginine residues) and a so-called "linker domain" located between the central repeat domain and the KR domain. To date, two splicing variants of STOP, E-STOP and F-STOP, have been characterised in rodents. Knowledge of STOPs function and properties may help in the treatment of neuroleptics in illnesses such as schizophrenia, currently thought to result from synaptic defects [].

>PF05217 STOP: STOP protein; InterPro: IPR007882 Neurons contain abundant subsets of highly stable microtubules that resist de-polymerising conditions such as exposure to the cold Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00