Psyllid ID: psy9531

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------41
Protein Sequence
MSRLEPGTLVYSEEDDNQRLVYARMQVQGTGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEEMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRNMPVP
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEccEEEccccccccccccccccccccEEEEEEccccccccccccEEEEEccccccEEEEEEEcccccccHHHHHcccccccccccccccccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEccccccccHHHHHHHHcccccEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccHHHcccEcccccccccccccccccccccEEEEEcccEcccccccccccccccccEEEEEEEEEEcccccccccccEEEEEEccccccEEEEEEEccccHHHEEEEEEcccHHHccccccEEcEcccccccccccccccccc
Coil and Loop (DISEMBL)
msrlepgtlvyseeddnQRLVYARMQVQGTGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEEMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGseaevdavemhepytyltGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEkqghsdltrrEGIHESVAQDVASVFKGKTTAQLEALQTQIELKIssktenidNVITAEEKALQREArkgmggdeaefsveslldpqvylwsdkyrprkpryfnrvhtgfewnkynqthydmdnpppkivqgykfnifypdlidknstpqyflntcadnqdfailrfhagppyedIAFKIVNREweysykrgfrchdetsatldstglcrnmpvp
Flexible Loop (DISEMBL)
msrlepgtlvyseeddnqrLVYARMqvqgtgskvearkkkkkkkkkkkkkkkkkknlcanvkkrrqereaeraereeemalTQRGKEAAQFEEWQRQEDQFHLEQARLrstiriqegrakpIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIelkissktenidnVITAEEKALQREARKGMGGDEAEfsveslldpqvylwsdkyrprkpryfNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRgfrchdetsatldstglcrnmpvp
Low Complexity Region (SEG)
MSRLEPGTLVYSEEDDNQRLVYARMQVQGTGSKVEARkkkkkkkkkkkkkkkkkkNLCANVKKrrqereaeraereeeMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRNMPVP
Disordered region (IsUnstruct)
***********************************************************************************************************LRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRK**********************VASVFKGKTTAQLEALQTQIELK***********************************VESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDET****************
Disordered Region (DISOPRED)
****EPG*LVYSEEDDNQRLVYAR*********************************************************************************************RAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDEL******************************************************************************************************PRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRNMP**
Disordered Region (DISEMBL)
MSRLEPGTLVYSEEDDNQRLVYARMQV*************************************************************AQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKAL*************EFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRNMPVP
Disordered Region (DISPRO)
****EPGTLVYSEEDDNQRLVYARMQVQGTGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEEMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEK**************SVAQDVASVFKGKTTAQLEALQTQIELKISS********IT*EEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSRLEPGTLVYSEEDDNQRLVYARMQVQGTGSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATLDSTGLCRNMPVP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	409	2.2.26 [Sep-21-2011]
Q9VR99	720	Cactin OS=Drosophila mela	yes	N/A	0.339	0.193	0.790	1e-69
F1Q8W0	835	Cactin OS=Danio rerio GN=	yes	N/A	0.325	0.159	0.797	2e-68
Q8WUQ7	758	Cactin OS=Homo sapiens GN	yes	N/A	0.376	0.203	0.707	2e-67
Q9CS00	772	Cactin OS=Mus musculus GN	yes	N/A	0.320	0.169	0.816	3e-66
G5EG14	657	Cactin OS=Caenorhabditis	yes	N/A	0.315	0.196	0.684	8e-53
B6KG46	703	Cactin OS=Toxoplasma gond	N/A	N/A	0.256	0.149	0.707	8e-44
O14342	517	Uncharacterized protein C	yes	N/A	0.239	0.189	0.513	3e-27

>sp|Q9VR99|CATIN_DROME Cactin OS=Drosophila melanogaster GN=cactin PE=1 SV=3

 Score =  264 bits (674), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 113/143 (79%), Positives = 126/143 (88%)

Query: 247 DNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEW 306
           +N +T +E  ++ EA++GM GDEAEFSVE+ LD    L +DKYRPRKPRYFNRVHTGFEW
Sbjct: 558 NNQLTPQELRMRNEAKQGMQGDEAEFSVETTLDAVPQLATDKYRPRKPRYFNRVHTGFEW 617

Query: 307 NKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPP 366
           NKYNQTHYDMDNPPPKIVQGYKFNIFYPDL+DK+ TPQYFL  CADN DFA+LRFH GPP
Sbjct: 618 NKYNQTHYDMDNPPPKIVQGYKFNIFYPDLMDKSQTPQYFLTPCADNGDFAVLRFHTGPP 677

Query: 367 YEDIAFKIVNREWEYSYKRGFRC 389
           YEDIAFKIVNREWE+SYKRGFRC
Sbjct: 678 YEDIAFKIVNREWEFSYKRGFRC 700

Plays a role during early embryonic development. Involved in the dorsal-ventral embryonic patterning. Probably acts as a negative regulator of the NF-kappa-B (Rel) signaling pathway.
Drosophila melanogaster (taxid: 7227)

>sp|F1Q8W0|CATIN_DANRE Cactin OS=Danio rerio GN=cactin PE=2 SV=1

 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 121/138 (87%)

Query: 252 AEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQ 311
           + E    R A++GMGGDEA+FSVE  L  ++YLW+DKYRPRKPR+FNRVHTGFEWNKYNQ
Sbjct: 678 SAEDLFVRRAKEGMGGDEAQFSVEMPLTGKMYLWADKYRPRKPRFFNRVHTGFEWNKYNQ 737

Query: 312 THYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIA 371
           THYD DNPPPKIVQGYKFNIFYPDLIDK STPQYFL  C DN+DF ILRFHAGPPYEDIA
Sbjct: 738 THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPQYFLEPCPDNKDFGILRFHAGPPYEDIA 797

Query: 372 FKIVNREWEYSYKRGFRC 389
           FKIVNREWEYS++ GFRC
Sbjct: 798 FKIVNREWEYSHRHGFRC 815

May be involved in the regulation of innate immune response (By similarity). Plays a role during early embryonic development. Involved in the formation of the anteroposterior axis with important roles also in neural development.

Danio rerio (taxid: 7955)

>sp|Q8WUQ7|CATIN_HUMAN Cactin OS=Homo sapiens GN=CACTIN PE=1 SV=3

 Score =  256 bits (655), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 128/164 (78%), Gaps = 10/164 (6%)

Query: 227 QLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWS 286
           QL   Q Q+    S   E+I            R A++GMG DEA+FSVE  L  + YLW+
Sbjct: 586 QLSRQQLQVTGDASESAEDI----------FFRRAKEGMGQDEAQFSVEMPLTGKAYLWA 635

Query: 287 DKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYF 346
           DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DNPPPKIVQGYKFNIFYPDLIDK STP+YF
Sbjct: 636 DKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYF 695

Query: 347 LNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCH 390
           L  CADN+DFAILRFHAGPPYEDIAFKIVNREWEYS++ GFRC 
Sbjct: 696 LEACADNKDFAILRFHAGPPYEDIAFKIVNREWEYSHRHGFRCQ 739

May be involved in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q9CS00|CATIN_MOUSE Cactin OS=Mus musculus GN=Cactin PE=1 SV=2

 Score =  253 bits (645), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 118/131 (90%)

Query: 259 REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDN 318
           R AR+GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DN
Sbjct: 622 RRAREGMGQDEAQFSVEMPLGGRAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDN 681

Query: 319 PPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNRE 378
           PPPKIVQGYKFNIFYPDLI K +TP+YFL  CADN+DFAILRFHAGPPYEDIAFKIV+RE
Sbjct: 682 PPPKIVQGYKFNIFYPDLIRKRATPEYFLEACADNRDFAILRFHAGPPYEDIAFKIVSRE 741

Query: 379 WEYSYKRGFRC 389
           WEYS++ GFRC
Sbjct: 742 WEYSHRHGFRC 752

May be involved in pre-mRNA splicing.

Mus musculus (taxid: 10090)

>sp|G5EG14|CATIN_CAEEL Cactin OS=Caenorhabditis elegans GN=cacn-1 PE=1 SV=1

 Score =  207 bits (528), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 89/130 (68%), Positives = 102/130 (78%), Gaps = 1/130 (0%)

Query: 261 ARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPP 320
           AR+GM  DE+ F  E  L  Q +LWSDKYRPRKP Y NRV TGF+WNKYNQTHYD DNPP
Sbjct: 510 AREGMEADESIFGAEEQLAAQRHLWSDKYRPRKPTYLNRVQTGFDWNKYNQTHYDQDNPP 569

Query: 321 PKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWE 380
           PKIVQGYKFNIFYPDL+D    P++ L +C D  DFAI+RF AGPPYEDIAFK+VNREWE
Sbjct: 570 PKIVQGYKFNIFYPDLLDMTVAPRFGLTSCED-PDFAIIRFKAGPPYEDIAFKVVNREWE 628

Query: 381 YSYKRGFRCH 390
             +K G++C 
Sbjct: 629 TLHKNGYKCQ 638

Plays a role during early embryonic development. Required for the distal tip cell migration at the end of larval development and for gonad morphogenesis.

Caenorhabditis elegans (taxid: 6239)

>sp|B6KG46|CATIN_TOXGO Cactin OS=Toxoplasma gondii GN=CACTIN PE=1 SV=1

 Score =  178 bits (451), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)

Query: 283 YLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNST 342
           Y W +KYRPRKPR+FNRV TG+ WNKYN THYD DNPPPK+VQGYKFNIFYPDLIDK   
Sbjct: 578 YTWEEKYRPRKPRFFNRVKTGYSWNKYNTTHYDHDNPPPKVVQGYKFNIFYPDLIDKTKA 637

Query: 343 PQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFR 388
           P +FL   +D  D  I+RFHAGPPYEDIAFKI+N+EW+    RGFR
Sbjct: 638 PTWFLEP-SDTPDTVIIRFHAGPPYEDIAFKILNQEWQLERFRGFR 682

Involved in the regulation of G1 progression and stage differentiation of tachyzoites. May play a role in gene expression.

Toxoplasma gondii (taxid: 5811)

>sp|O14342|YB3C_SCHPO Uncharacterized protein C2F12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2F12.12c PE=4 SV=1

 Score =  123 bits (308), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 11/109 (10%)

Query: 292 RKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFL---- 347
           +KP YFNRV  GFEWN YNQ H++  +PPPK VQGY+FN+FYPDLI     P Y +    
Sbjct: 389 KKPHYFNRVLLGFEWNSYNQAHFNEAHPPPKAVQGYRFNVFYPDLIGTGRAPTYRIERTR 448

Query: 348 -----NTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKR--GFRC 389
                +T     D  I+RF AG PY+DIAF IV+++W+YS KR  GF+ 
Sbjct: 449 RKNKSDTTDLQDDVCIIRFIAGEPYQDIAFSIVDKDWDYSAKRDHGFKS 497

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	409
449491582	595	PREDICTED: LOW QUALITY PROTEIN: cactin [	0.801	0.551	0.601	1e-122
307170299	1266	Uncharacterized protein C19orf29 [Campon	0.369	0.119	0.842	1e-78
307192570	703	Uncharacterized protein C19orf29 [Harpeg	0.369	0.214	0.842	4e-78
350418869	717	PREDICTED: uncharacterized protein C19or	0.369	0.210	0.835	3e-77
340713929	717	PREDICTED: uncharacterized protein C19or	0.369	0.210	0.835	3e-77
380025018	712	PREDICTED: uncharacterized protein C19or	0.369	0.212	0.835	3e-77
332018515	586	Uncharacterized protein C19orf29 [Acromy	0.349	0.244	0.875	4e-77
383849449	715	PREDICTED: uncharacterized protein C19or	0.369	0.211	0.835	4e-77
328781817	713	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.369	0.211	0.822	1e-75
328706992	680	PREDICTED: uncharacterized protein C19or	0.371	0.223	0.816	2e-75

>gi|449491582|ref|XP_004174410.1| PREDICTED: LOW QUALITY PROTEIN: cactin [Taeniopygia guttata]

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/369 (60%), Positives = 264/369 (71%), Gaps = 41/369 (11%)

Query: 61  VKKRRQEREAERAEREEEMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAK 120
           VK+ R ERE E+A RE+E+ + QR KEA  F+ W+ QED FHL+QA+LRS IRI++GRAK
Sbjct: 210 VKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAK 269

Query: 121 PIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDI 180
           PIDLLAKYI +E +  AVEMHEPYT+L GL + D+EDL+EDI+VYMELE+G+N  +W D+
Sbjct: 270 PIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVSDMEDLVEDIQVYMELEQGKNVDFWRDM 329

Query: 181 SIIVEDELHGLRKLEKQGHSDLT-RREGIHESVAQDVASVFKGKTTAQLEALQTQIELKI 239
           +II EDE+  LRKLE  G      RR+G++ SV+ DV SVFKGKT  QL+AL   IE KI
Sbjct: 330 TIITEDEIAKLRKLEASGKGGPGERRDGVNASVSSDVQSVFKGKTYNQLQALYQGIESKI 389

Query: 240 SSKTENIDNVITAEEKALQ--------------------------------------REA 261
            +   N+D  I   E  LQ                                      R+A
Sbjct: 390 RAGGPNLD--IGYWESLLQQLKAYMARARLRERHQDVLRQKXYKRSDASESTDDIFFRKA 447

Query: 262 RKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPP 321
           ++GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DNPPP
Sbjct: 448 KEGMGADEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPP 507

Query: 322 KIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEY 381
           KIVQGYKFNIFYPDLIDK STP+YFL  C DN+DFAILRFHAGPPYEDIAFKIVNREWEY
Sbjct: 508 KIVQGYKFNIFYPDLIDKRSTPEYFLEACQDNKDFAILRFHAGPPYEDIAFKIVNREWEY 567

Query: 382 SYKRGFRCH 390
           S++ GFRC 
Sbjct: 568 SHRHGFRCQ 576

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|307170299|gb|EFN62654.1| Uncharacterized protein C19orf29 [Camponotus floridanus]

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 139/152 (91%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+T EE+A+ REARKGMG DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 486 QVLSTGRKIQNVLTTEEQAMHREARKGMGSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 545

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 546 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 605

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 606 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 637

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192570|gb|EFN75758.1| Uncharacterized protein C19orf29 [Harpegnathos saltator]

 Score =  298 bits (762), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 139/152 (91%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK MG DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 532 QVLSTGRKIQNVLTAEEQAMHREARKNMGSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 591

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 592 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 651

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 652 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 683

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418869|ref|XP_003491995.1| PREDICTED: uncharacterized protein C19orf29-like isoform 1 [Bombus impatiens] gi|350418872|ref|XP_003491996.1| PREDICTED: uncharacterized protein C19orf29-like isoform 2 [Bombus impatiens]

 Score =  295 bits (755), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 127/152 (83%), Positives = 138/152 (90%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK M  DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 546 QVLSTGRKIQNVMTAEEQAMHREARKNMSSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 605

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 606 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 665

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 666 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 697

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713929|ref|XP_003395486.1| PREDICTED: uncharacterized protein C19orf29-like isoform 1 [Bombus terrestris] gi|340713931|ref|XP_003395487.1| PREDICTED: uncharacterized protein C19orf29-like isoform 2 [Bombus terrestris]

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 127/152 (83%), Positives = 138/152 (90%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK M  DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 546 QVLSTGRKIQNVMTAEEQAMHREARKNMSSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 605

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 606 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 665

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 666 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 697

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380025018|ref|XP_003696278.1| PREDICTED: uncharacterized protein C19orf29-like [Apis florea]

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 127/152 (83%), Positives = 138/152 (90%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK M  DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 541 QVLSTGRKIQNVMTAEEQAMHREARKNMNSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 600

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 601 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 660

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 661 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 692

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018515|gb|EGI59105.1| Uncharacterized protein C19orf29 [Acromyrmex echinatior]

 Score =  295 bits (754), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 126/144 (87%), Positives = 135/144 (93%)

Query: 246 IDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFE 305
           I NV+T EE+A+ REARKGMG DEA+FSVES L+ Q+YLWSDKYRPRKPRYFNRVHTGFE
Sbjct: 423 IQNVLTIEEQAMHREARKGMGSDEAQFSVESSLEAQIYLWSDKYRPRKPRYFNRVHTGFE 482

Query: 306 WNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGP 365
           WNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  C DN+DFAILRFHAGP
Sbjct: 483 WNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCTDNKDFAILRFHAGP 542

Query: 366 PYEDIAFKIVNREWEYSYKRGFRC 389
           PYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 543 PYEDIAFKIVNREWEYSYKRGFRC 566

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849449|ref|XP_003700357.1| PREDICTED: uncharacterized protein C19orf29-like [Megachile rotundata]

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 127/152 (83%), Positives = 138/152 (90%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK M  DEA+FSVES L+ Q+YLWSDKYRPRKPRYF
Sbjct: 544 QVLSTGRKIQNVMTAEEQAMHREARKNMSSDEAQFSVESSLEAQIYLWSDKYRPRKPRYF 603

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 604 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 663

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 664 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 695

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781817|ref|XP_624972.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C19orf29 isoform 2 [Apis mellifera]

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 125/152 (82%), Positives = 136/152 (89%)

Query: 238 KISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYF 297
           ++ S    I NV+TAEE+A+ REARK M  DEA+ SVES L+ Q+YLWSD YRPRKPRYF
Sbjct: 542 QVLSTGRKIQNVMTAEEQAMHREARKNMNSDEAQXSVESSLEAQIYLWSDXYRPRKPRYF 601

Query: 298 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFA 357
           NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKN+TP+YFL  CADN+DFA
Sbjct: 602 NRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNTTPEYFLTPCADNKDFA 661

Query: 358 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 662 ILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 693

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706992|ref|XP_001952287.2| PREDICTED: uncharacterized protein C19orf29 homolog [Acyrthosiphon pisum]

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 125/153 (81%), Positives = 135/153 (88%)

Query: 237 LKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRY 296
           L++      I+NV+  EE ALQ+EARKGM  +EAEFSVE+ LD QVYLWSDKYRPRKPRY
Sbjct: 508 LQVQGTGTRIENVMAVEEMALQKEARKGMTNEEAEFSVETELDHQVYLWSDKYRPRKPRY 567

Query: 297 FNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDF 356
           FNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLI+K STPQYFL  C DN +F
Sbjct: 568 FNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLINKGSTPQYFLTACGDNPEF 627

Query: 357 AILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           A+LRFHAGPPYEDIAFKIVNREWEYSYKRGFRC
Sbjct: 628 AVLRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 660

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	409
FB|FBgn0031114	720	cactin "cactin" [Drosophila me	0.386	0.219	0.735	9.9e-114
ZFIN|ZDB-GENE-060503-322	530	cactin "cactin" [Danio rerio (	0.332	0.256	0.808	1.3e-113
UNIPROTKB|F1MB35	763	C7H19orf29 "Uncharacterized pr	0.320	0.171	0.824	8.9e-113
UNIPROTKB|Q8WUQ7	758	CACTIN "Cactin" [Homo sapiens	0.320	0.172	0.832	1.8e-112
UNIPROTKB|F1PZX0	752	CACTIN "Uncharacterized protei	0.320	0.174	0.816	1.3e-111
WB|WBGene00012230	657	cacn-1 [Caenorhabditis elegans	0.312	0.194	0.689	3.7e-70
UNIPROTKB|G5EG14	657	cacn-1 "Cactin" [Caenorhabditi	0.312	0.194	0.689	3.7e-70
UNIPROTKB|H9KYQ5	189	CACTIN "Uncharacterized protei	0.383	0.830	0.696	3.8e-62
MGI|MGI:1917562	772	Cactin "cactin, spliceosome C	0.476	0.252	0.6	9e-61
RGD|1563634	764	Cactin "cactin, spliceosome C	0.476	0.255	0.6	1.5e-60

FB|FBgn0031114 cactin "cactin" [Drosophila melanogaster (taxid:7227)]

 Score = 650 (233.9 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
 Identities = 117/159 (73%), Positives = 133/159 (83%)

Query:   232 QTQIELKISSKTENIDN-VITAEEKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYR 290
             +TQ +  +    E +DN  +T +E  ++ EA++GM GDEAEFSVE+ LD    L +DKYR
Sbjct:   542 RTQRQRLLILHPERVDNNQLTPQELRMRNEAKQGMQGDEAEFSVETTLDAVPQLATDKYR 601

Query:   291 PRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTC 350
             PRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDL+DK+ TPQYFL  C
Sbjct:   602 PRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLMDKSQTPQYFLTPC 661

Query:   351 ADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
             ADN DFA+LRFH GPPYEDIAFKIVNREWE+SYKRGFRC
Sbjct:   662 ADNGDFAVLRFHTGPPYEDIAFKIVNREWEFSYKRGFRC 700

GO:0009950 "dorsal/ventral axis specification" evidence=IGI

GO:0006952 "defense response" evidence=NAS

GO:0007165 "signal transduction" evidence=NAS

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-060503-322 cactin "cactin" [Danio rerio (taxid:7955)]

 Score = 635 (228.6 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
 Identities = 110/136 (80%), Positives = 120/136 (88%)

Query:   254 EKALQREARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTH 313
             E    R A++GMGGDEA+FSVE  L  ++YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTH
Sbjct:   375 EDLFVRRAKEGMGGDEAQFSVEMPLTGKMYLWADKYRPRKPRFFNRVHTGFEWNKYNQTH 434

Query:   314 YDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFK 373
             YD DNPPPKIVQGYKFNIFYPDLIDK STPQYFL  C DN+DF ILRFHAGPPYEDIAFK
Sbjct:   435 YDFDNPPPKIVQGYKFNIFYPDLIDKRSTPQYFLEPCPDNKDFGILRFHAGPPYEDIAFK 494

Query:   374 IVNREWEYSYKRGFRC 389
             IVNREWEYS++ GFRC
Sbjct:   495 IVNREWEYSHRHGFRC 510

GO:0003407 "neural retina development" evidence=IMP

UNIPROTKB|F1MB35 C7H19orf29 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 627 (225.8 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
 Identities = 108/131 (82%), Positives = 118/131 (90%)

Query:   259 REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDN 318
             R A++GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DN
Sbjct:   613 RRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDN 672

Query:   319 PPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNRE 378
             PPPKIVQGYKFNIFYPDLIDK STP+YFL  CADN+DFA LRFHAGPPYEDIAFKIVNRE
Sbjct:   673 PPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFATLRFHAGPPYEDIAFKIVNRE 732

Query:   379 WEYSYKRGFRC 389
             WEYS++ GFRC
Sbjct:   733 WEYSHRHGFRC 743

GO:0071356 "cellular response to tumor necrosis factor" evidence=IEA

GO:0071347 "cellular response to interleukin-1" evidence=IEA

GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=IEA

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA

GO:0032688 "negative regulation of interferon-beta production" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0001933 "negative regulation of protein phosphorylation" evidence=IEA

UNIPROTKB|Q8WUQ7 CACTIN "Cactin" [Homo sapiens (taxid:9606)]

 Score = 632 (227.5 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
 Identities = 109/131 (83%), Positives = 119/131 (90%)

Query:   259 REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDN 318
             R A++GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DN
Sbjct:   608 RRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDN 667

Query:   319 PPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNRE 378
             PPPKIVQGYKFNIFYPDLIDK STP+YFL  CADN+DFAILRFHAGPPYEDIAFKIVNRE
Sbjct:   668 PPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIAFKIVNRE 727

Query:   379 WEYSYKRGFRC 389
             WEYS++ GFRC
Sbjct:   728 WEYSHRHGFRC 738

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0045087 "innate immune response" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=IDA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IDA

GO:0071222 "cellular response to lipopolysaccharide" evidence=IDA

GO:0071347 "cellular response to interleukin-1" evidence=IDA

GO:0071356 "cellular response to tumor necrosis factor" evidence=IDA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IDA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0032688 "negative regulation of interferon-beta production" evidence=IMP

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=IMP

GO:0001933 "negative regulation of protein phosphorylation" evidence=IMP

UNIPROTKB|F1PZX0 CACTIN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 622 (224.0 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
 Identities = 107/131 (81%), Positives = 117/131 (89%)

Query:   259 REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDN 318
             R A++GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DN
Sbjct:   602 RRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDN 661

Query:   319 PPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNRE 378
             PPPKIVQGYKFNIFYPDLIDK STP+YFL  C DN+DFA LRFHAGPPYEDIAFKIVNRE
Sbjct:   662 PPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACPDNKDFATLRFHAGPPYEDIAFKIVNRE 721

Query:   379 WEYSYKRGFRC 389
             WEYS++ GFRC
Sbjct:   722 WEYSHRHGFRC 732

GO:0071356 "cellular response to tumor necrosis factor" evidence=IEA

GO:0071347 "cellular response to interleukin-1" evidence=IEA

GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=IEA

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA

GO:0032688 "negative regulation of interferon-beta production" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0001933 "negative regulation of protein phosphorylation" evidence=IEA

WB|WBGene00012230 cacn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 506 (183.2 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
 Identities = 89/129 (68%), Positives = 102/129 (79%)

Query:   261 ARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPP 320
             AR+GM  DE+ F  E  L  Q +LWSDKYRPRKP Y NRV TGF+WNKYNQTHYD DNPP
Sbjct:   510 AREGMEADESIFGAEEQLAAQRHLWSDKYRPRKPTYLNRVQTGFDWNKYNQTHYDQDNPP 569

Query:   321 PKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWE 380
             PKIVQGYKFNIFYPDL+D    P++ L +C D  DFAI+RF AGPPYEDIAFK+VNREWE
Sbjct:   570 PKIVQGYKFNIFYPDLLDMTVAPRFGLTSCED-PDFAIIRFKAGPPYEDIAFKVVNREWE 628

Query:   381 YSYKRGFRC 389
               +K G++C
Sbjct:   629 TLHKNGYKC 637

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0040015 "negative regulation of multicellular organism growth" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0040022 "feminization of hermaphroditic germ-line" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|G5EG14 cacn-1 "Cactin" [Caenorhabditis elegans (taxid:6239)]

 Score = 506 (183.2 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
 Identities = 89/129 (68%), Positives = 102/129 (79%)

Query:   261 ARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPP 320
             AR+GM  DE+ F  E  L  Q +LWSDKYRPRKP Y NRV TGF+WNKYNQTHYD DNPP
Sbjct:   510 AREGMEADESIFGAEEQLAAQRHLWSDKYRPRKPTYLNRVQTGFDWNKYNQTHYDQDNPP 569

Query:   321 PKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWE 380
             PKIVQGYKFNIFYPDL+D    P++ L +C D  DFAI+RF AGPPYEDIAFK+VNREWE
Sbjct:   570 PKIVQGYKFNIFYPDLLDMTVAPRFGLTSCED-PDFAIIRFKAGPPYEDIAFKVVNREWE 628

Query:   381 YSYKRGFRC 389
               +K G++C
Sbjct:   629 TLHKNGYKC 637

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

UNIPROTKB|H9KYQ5 CACTIN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 115/165 (69%), Positives = 135/165 (81%)

Query:   225 TAQLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQVYL 284
             T +L  L+ Q+++   + TE+ D++         R+A++GMG DEA+FSVE  L  + YL
Sbjct:    13 THRLLLLRQQLQVT-GNATESADDIFF-------RKAKEGMGADEAQFSVEMPLTGKAYL 64

Query:   285 WSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQ 344
             W+DKYRPRKPR+FNRVHTGFEWNKYNQTHYD DNPPPKIVQGYKFNIFYPDLIDK STP+
Sbjct:    65 WADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPE 124

Query:   345 YFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
             YFL  C DN+DFAILRFHAGPPYEDIAFKIVNREWEYS++ GFRC
Sbjct:   125 YFLEACQDNKDFAILRFHAGPPYEDIAFKIVNREWEYSHRHGFRC 169

GO:0001933 "negative regulation of protein phosphorylation" evidence=IEA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0032688 "negative regulation of interferon-beta production" evidence=IEA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=IEA

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA

GO:0071347 "cellular response to interleukin-1" evidence=IEA

GO:0071356 "cellular response to tumor necrosis factor" evidence=IEA

MGI|MGI:1917562 Cactin "cactin, spliceosome C complex subunit" [Mus musculus (taxid:10090)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 123/205 (60%), Positives = 148/205 (72%)

Query:   195 EKQGHSDLTRREGIHESVAQDVASVFKGKT-TAQ---LEA--LQTQIEL-KISSKTENID 247
             E +G + L   + I +S+A   A  +  +  TA    L+A  L+   +L ++    + + 
Sbjct:   548 EAEGEAVLMEEDLIQQSLADYDAGRYSPRLLTAHELPLDAHVLEPHEDLQRLQLSRQQLQ 607

Query:   248 NVITAEEKALQ---REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGF 304
                 A E A     R AR+GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGF
Sbjct:   608 ATGDASESAEDIFFRRAREGMGQDEAQFSVEMPLGGRAYLWADKYRPRKPRFFNRVHTGF 667

Query:   305 EWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAG 364
             EWNKYNQTHYD DNPPPKIVQGYKFNIFYPDLI K +TP+YFL  CADN+DFAILRFHAG
Sbjct:   668 EWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIRKRATPEYFLEACADNRDFAILRFHAG 727

Query:   365 PPYEDIAFKIVNREWEYSYKRGFRC 389
             PPYEDIAFKIV+REWEYS++ GFRC
Sbjct:   728 PPYEDIAFKIVSREWEYSHRHGFRC 752

GO:0001933 "negative regulation of protein phosphorylation" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=ISO

GO:0032688 "negative regulation of interferon-beta production" evidence=ISO

GO:0032717 "negative regulation of interleukin-8 production" evidence=ISO

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=ISO

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=ISO

GO:0045087 "innate immune response" evidence=IEA

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO

GO:0071347 "cellular response to interleukin-1" evidence=ISO

GO:0071356 "cellular response to tumor necrosis factor" evidence=ISO

RGD|1563634 Cactin "cactin, spliceosome C complex subunit" [Rattus norvegicus (taxid:10116)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 123/205 (60%), Positives = 147/205 (71%)

Query:   195 EKQGHSDLTRREGIHESVAQDVASVFKGKT-TAQ---LEA--LQTQIEL-KISSKTENID 247
             E  G + L   + I +S+A   A  +  +  TA    L+A  L+   +L ++    + + 
Sbjct:   540 EADGEAVLMEEDLIQQSLADYDAGRYSPRLLTAHELPLDAHVLEPHEDLQRLQLSRQQLQ 599

Query:   248 NVITAEEKALQ---REARKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGF 304
                 A E A     R AR+GMG DEA+FSVE  L  + YLW+DKYRPRKPR+FNRVHTGF
Sbjct:   600 ATGDASESAEDIFFRRAREGMGQDEAQFSVEMPLGGRAYLWADKYRPRKPRFFNRVHTGF 659

Query:   305 EWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAG 364
             EWNKYNQTHYD DNPPPKIVQGYKFNIFYPDLI K +TP+YFL  CADN+DFAILRFHAG
Sbjct:   660 EWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIRKRATPEYFLEACADNRDFAILRFHAG 719

Query:   365 PPYEDIAFKIVNREWEYSYKRGFRC 389
             PPYEDIAFKIV+REWEYS++ GFRC
Sbjct:   720 PPYEDIAFKIVSREWEYSHRHGFRC 744

GO:0001933 "negative regulation of protein phosphorylation" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0031665 "negative regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=ISO

GO:0032688 "negative regulation of interferon-beta production" evidence=ISO

GO:0032717 "negative regulation of interleukin-8 production" evidence=ISO

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=ISO

GO:0034122 "negative regulation of toll-like receptor signaling pathway" evidence=ISO

GO:0060339 "negative regulation of type I interferon-mediated signaling pathway" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO

GO:0071347 "cellular response to interleukin-1" evidence=ISO

GO:0071356 "cellular response to tumor necrosis factor" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	409
pfam09732	125	pfam09732, CactinC_cactus, Cactus-binding C-termin	5e-74
smart01050	129	smart01050, CactinC_cactus, Cactus-binding C-termi	6e-61
pfam10312	190	pfam10312, Cactin_mid, Conserved mid region of cac	1e-52
PRK11192	434	PRK11192, PRK11192, ATP-dependent RNA helicase Srm	2e-05
pfam09831	177	pfam09831, DUF2058, Uncharacterized protein conser	0.002

>gnl|CDD|192352 pfam09732, CactinC_cactus, Cactus-binding C-terminus of cactin protein

 Score =  226 bits (578), Expect = 5e-74
 Identities = 82/105 (78%), Positives = 89/105 (84%)

Query: 285 WSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQ 344
           WSDKYRPRKPRYFNRV TGF+WNKYNQTHYD DNPPPK VQGYKFNIFYPDLIDK   P+
Sbjct: 1   WSDKYRPRKPRYFNRVKTGFDWNKYNQTHYDSDNPPPKTVQGYKFNIFYPDLIDKGKAPR 60

Query: 345 YFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRC 389
           Y +  C D  D  +LRFHAGPPYEDIAF+IVN+EW+YS KRGFR 
Sbjct: 61  YRIEPCEDPDDTCLLRFHAGPPYEDIAFRIVNKEWDYSRKRGFRS 105

CactinC_cactus is the C-terminal 200 residues of the cactin protein which are necessary for the association of cactin with IkappaB-cactus as one of the intracellular members of the Rel complex. The Rel (NF-kappaB) pathway is conserved in invertebrates and vertebrates. In mammals, it controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development, and in the establishment of dorsal-ventral polarity in the early embryo. Most members of the family also have a Cactin_mid domain pfam10312 further upstream. Length = 125

>gnl|CDD|214996 smart01050, CactinC_cactus, Cactus-binding C-terminus of cactin protein

 Score =  192 bits (491), Expect = 6e-61
 Identities = 76/110 (69%), Positives = 87/110 (79%), Gaps = 4/110 (3%)

Query: 285 WSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQ 344
           W DKYR RKPRYFNRV TG++WNKYNQTHYD DNPPPKIVQGYKFNIFYPDLIDK   P+
Sbjct: 1   WEDKYRLRKPRYFNRVKTGYDWNKYNQTHYDNDNPPPKIVQGYKFNIFYPDLIDKGKAPR 60

Query: 345 YFLNTC----ADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCH 390
           Y + +       + D  +LRF AGPPYEDIAFKIVNREW+YS++ GF+  
Sbjct: 61  YRIESSFEIEKPDDDTCLLRFSAGPPYEDIAFKIVNREWDYSHRGGFKSS 110

CactinC_cactus is the C-terminal 200 residues of the cactin protein which are necessary for the association of cactin with IkappaB-cactus as one of the intracellular members of the Rel complex. The Rel (NF-kappaB) pathway is conserved in invertebrates and vertebrates. In mammals, it controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development, and in the establishment of dorsal-ventral polarity in the early embryo. Most members of the family also have a Cactin_mid domain further upstream. Length = 129

>gnl|CDD|220686 pfam10312, Cactin_mid, Conserved mid region of cactin

 Score =  173 bits (441), Expect = 1e-52
 Identities = 83/170 (48%), Positives = 112/170 (65%), Gaps = 8/170 (4%)

Query: 83  QRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYI---GSEAEVDAVE 139
           +R +E   F+EW+ +ED+FHL+QA+ R+ IRI+EGRAKPIDLLA+ +     E +V+  E
Sbjct: 1   RRLREDEAFKEWEAKEDEFHLKQAKKRAEIRIKEGRAKPIDLLARNLRFIDPEKDVE-FE 59

Query: 140 MHEPYTYLTGLAIKDLEDLLEDIKVYMELEKG-ENEAYWNDISIIVEDELHGLRKLEKQG 198
           +HEPYT L GL   +LE+L EDIKVY+ELEK  +N  YWN + II EDE   L KLEK+ 
Sbjct: 60  LHEPYTVLEGLTEDELEELEEDIKVYLELEKNPKNREYWNALLIICEDE---LEKLEKKE 116

Query: 199 HSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDN 248
                 R G+H SVA DV  +  GK+  +LE L+ QI+ K+ S    +D 
Sbjct: 117 AEGRADRSGLHSSVAADVKKILSGKSYEELEELEGQIKAKLRSGEAKVDT 166

This is the conserved middle region of a family of proteins referred to as cactins. The region contains two of three predicted coiled-coil domains. Most members of this family have a CactinC_cactus pfam09732 domain at the C-terminal end. Upstream of Mid_cactin in Drosophila members are a serine-rich region, some non-typical RD motifs and three predicted bipartite nuclear localisation signals, none of which are well-conserved. Cactin associates with IkappaB-cactus as one of the intracellular members of the Rel (NF-kappaB) pathway which is conserved in invertebrates and vertebrates. In mammals, this pathway controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development, and in the establishment of dorsal-ventral polarity in the early embryo. Length = 190

>gnl|CDD|236877 PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 33  KVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQ 66
           KV A++ +KK+K+K+K K KK+     N+ KRR+
Sbjct: 394 KVLAKRAEKKEKEKEKPKVKKRHRDTKNIGKRRK 427

Length = 434

>gnl|CDD|220431 pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 29 GTGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEEMALTQRGKEA 88
          G   K +A+K KK+K+K++K+ +K   +    +K+  +E +AE+AER+ E+   QR  EA
Sbjct: 10 GLVDKKKAKKAKKEKRKQRKQARKGADDGDDELKQAAEEAKAEKAERDRELNR-QRQAEA 68

Query: 89 AQ 90
           Q
Sbjct: 69 EQ 70

This domain, found in various prokaryotic proteins, has no known function. Length = 177

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	409
KOG2370|consensus	623		100.0
PF09732	125	CactinC_cactus: Cactus-binding C-terminus of cacti	100.0
PF10312	191	Cactin_mid: Conserved mid region of cactin; InterP	100.0
KOG0227|consensus	222		91.8
COG5246	222	PRP11 Splicing factor 3a, subunit 2 [RNA processin	91.36
PF10312	191	Cactin_mid: Conserved mid region of cactin; InterP	87.6
KOG1029|consensus	1118		85.28

>KOG2370|consensus

Probab=100.00  E-value=7.1e-136  Score=1032.34  Aligned_cols=363  Identities=51%  Similarity=0.906  Sum_probs=335.2

Q ss_pred             cchhhH----hhhhhhc-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q psy9531          17 NQRLVY----ARMQVQG-TGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEEMALTQRGK-EAAQ   90 (409)
Q Consensus        17 ~~~~~~----~r~~~~~-~~~~~~~~~~~~~~~~~~~~r~~e~~~EiEkvKkRReeRE~Ek~~~EEE~~~lqRer-E~eq   90 (409)
                      |+.|||    +|....| ++..|+  ++      -..+|+.+|+.|+++||+||++|+.|++++|+++.|+||++ ++.|
T Consensus        94 T~tFvw~kklere~~rgls~~ef~--~~------~~qrr~renl~evekvkk~reer~~eka~~Ede~mmlqrar~aa~q  165 (623)
T KOG2370|consen   94 TRTFVWGKKLEREGSRGLSPREFR--VS------NQQRRARENLPEVEKVKKRREERREEKAMQEDEFMMLQRARRAAIQ  165 (623)
T ss_pred             hhheeccchhhhhcccCCChhhcc--Hh------hHHHHHHhcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhh
Confidence            789999    9999999 556677  44      45566899999999999999999999999999999999999 8999


Q ss_pred             HHHHHHhhhhhhHHHHHhhhhhhhccCCCChhhHHHhhcCCccccccccccchhHHhhcCCHHhHHHHHHHHHHHHhhhc
Q psy9531          91 FEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYMELEK  170 (409)
Q Consensus        91 ~~ew~~kEdeFhL~Qak~RS~IRI~eGRaKpIDlLAk~I~~~~d~~dvel~ePy~v~~gLs~~dLEeL~eDIk~y~~LE~  170 (409)
                      |.+|..||  |||+|+|+||.|||++|||||||+|++||.++ ++++++|++||.||+||+++|||+|..||++|++||+
T Consensus       166 f~d~~~ke--Fh~dq~KlrseIrl~~Grak~idll~~~~dfg-deldmel~eP~~vlkg~~vedlEel~~dIk~y~ele~  242 (623)
T KOG2370|consen  166 FKDWRSKE--FHFDQDKLRSEIRLRPGRAKPIDLLKNYIDFG-DELDMELSEPYSVLKGLKVEDLEELSRDIKDYQELET  242 (623)
T ss_pred             hccccccc--chhhhHhhhheeeecCCccchhhHHHhhhccc-chhhhhccChHHHHccCCHhHHHHHHHHHHHHHHHhc
Confidence            99999999  99999999999999999999999999999996 4479999999999999999999999999999999997


Q ss_pred             -CCchHHHHHHHHHHHHHHhhhhhhhhcCCCCccccccchhhHHHHHHhhcCCCCHHHHHHHHHHHHHHHhcCCCCCC--
Q psy9531         171 -GENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENID--  247 (409)
Q Consensus       171 -~~n~efW~am~vIcedeL~kl~~~e~~~~~~~~~~~gi~~sV~~dI~~il~gKs~~eL~~Le~~I~~KL~s~~~~vD--  247 (409)
                       +++.+||++|.+||+|+|++.+  .+.+    .+..+||++|..||..||.|||++||++|+.||++||+||.+ +|  
T Consensus       243 ~~kr~tyW~~v~~iv~delq~~~--~aqn----sRgd~~haave~dv~~il~~Ks~~qL~eLe~qieaklrsns~-~d~~  315 (623)
T KOG2370|consen  243 NQKRLTYWKDVIMIVNDELQHNK--VAQN----SRGDKLHAAVEVDVRKILAGKSFEQLEELEAQIEAKLRSNSP-LDTD  315 (623)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHH--hhhh----ccccceehhhhhhHHHHhCCcCHHHHHHHHHHHHHHhccCCC-cchh
Confidence             9999999999999999999973  2221    134569999999999999999999999999999999999997 66  


Q ss_pred             --------------------------------------------------------------------------------
Q psy9531         248 --------------------------------------------------------------------------------  247 (409)
Q Consensus       248 --------------------------------------------------------------------------------  247 (409)
                                                                                                      
T Consensus       316 YWedll~qLk~ykAra~Lke~h~e~Lr~~l~~Lk~e~~~e~~qevapqlkeemed~eee~~~~~~Dpel~e~e~a~~~r~  395 (623)
T KOG2370|consen  316 YWEDLLNQLKSYKARARLKETHNEELRIRLNKLKNEEWDEAFQEVAPQLKEEMEDREEELYIVPIDPELIEREQAIPRRP  395 (623)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhChhhhhhhhcchhhcccCCCCCCccccccccCCCC
Confidence                                                                                            


Q ss_pred             ------------------------------------------------------------------ccchHHHHHHHHHH
Q psy9531         248 ------------------------------------------------------------------NVITAEEKALQREA  261 (409)
Q Consensus       248 ------------------------------------------------------------------~~~~~~e~~~~~~a  261 (409)
                                                                                        +...+.+..|...|
T Consensus       396 l~~e~~d~~rel~~~gny~~S~~yi~~~~ptqa~dp~~p~~e~Ll~e~e~~~~~tqr~~R~~~~~ds~~aPqe~em~a~a  475 (623)
T KOG2370|consen  396 LPEELADYERELYDAGNYVKSPTYIPESDPTQAQDPTEPKNENLLNEDEDSIANTQRLERLYLQSDSAEAPQELEMLADA  475 (623)
T ss_pred             CchHHHHHHHHHHHccccccCcccccCCCcccccCCCCcchhhhhhhhHHHHHHHHHHHHHhhcCCCcCCcHHHHHHHHH
Confidence                                                                              00011133456778


Q ss_pred             HcCCCCCcccccccccCCCccccccccCCCCCCcccccccccccccccccccCCCCCCCCcccceeeeeeecccCCCCCC
Q psy9531         262 RKGMGGDEAEFSVESLLDPQVYLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNS  341 (409)
Q Consensus       262 ~~gm~~~e~~f~~e~~l~~~~y~W~dKyrpRKPryFNRV~tGyeWNKYNqTHYD~DNPPPK~VQGYKFNIFYPDLidktk  341 (409)
                      ..||+.++++|++|++|++++||||||||||||+||||||||||||||||||||+|||||||||||||||||||||||++
T Consensus       476 ~eGMq~~eaifgaE~~Lda~~~lw~DkyrprKP~YfNRVhtGfeWNkYNQtHyd~dnPPPKiVQGYkFNIFYPDLidk~~  555 (623)
T KOG2370|consen  476 VEGMQTDEAIFGAEVNLDAEVYLWHDKYRPRKPHYFNRVHTGFEWNKYNQTHYDEDNPPPKIVQGYKFNIFYPDLIDKGR  555 (623)
T ss_pred             HhcccccchhccchhcccchhhhhccCcCcCCcchhhhhccccccccccccccccCCCCchhhcceeecccchhhhcccc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEeecCCCCCeEEEEEecCCCCcceeeeeecccccccCCCcccccccccccc
Q psy9531         342 TPQYFLNTCADNQDFAILRFHAGPPYEDIAFKIVNREWEYSYKRGFRCHDETSATL  397 (409)
Q Consensus       342 ~Pty~i~~~~~~~dtciirF~AGPPYEDIAFrIVnrEWeys~krGFk~~F~rGi~~  397 (409)
                      ||+|+|++|+++.||||||||||||||||||+|||||||||||+||||+|+||||+
T Consensus       556 aP~y~ie~~~d~~d~ciIRF~aGpPYeDIAFkIVnkeWeyshKrGfKcqF~ngvlq  611 (623)
T KOG2370|consen  556 APTYRIERCRDKNDFCIIRFHAGPPYEDIAFKIVNKEWEYSHKRGFKCQFDNGVLQ  611 (623)
T ss_pred             CCeeeeeecCCCCceEEEEeccCCcchhhhhhhhcchhhhhhhcCccceeeCCeee
Confidence            99999999999999999999999999999999999999999999999999999986

>PF09732 CactinC_cactus: Cactus-binding C-terminus of cactin protein; InterPro: IPR019134 This entry represents the C-terminal 200 residues of the cactin protein which is necessary for the association of cactin with IkappaB-cactus, as one of the intracellular members of the Rel complex

Probab=100.00  E-value=5e-77  Score=517.94  Aligned_cols=113  Identities=80%  Similarity=1.436  Sum_probs=111.9

Q ss_pred             ccccCCCCCCcccccccccccccccccccCCCCCCCCcccceeeeeeecccCCCCCCCCcEEEeecCCCCCeEEEEEecC
Q psy9531         285 WSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFNIFYPDLIDKNSTPQYFLNTCADNQDFAILRFHAG  364 (409)
Q Consensus       285 W~dKyrpRKPryFNRV~tGyeWNKYNqTHYD~DNPPPK~VQGYKFNIFYPDLidktk~Pty~i~~~~~~~dtciirF~AG  364 (409)
                      |+||||||||+||||||||||||||||||||+||||||+|||||||||||||||++++|+|+|++++++++||||+||||
T Consensus         1 w~~~~~~~kP~~fnrv~tg~~WnkyN~thYd~dnpPPK~vqGYkFnIfYPdL~d~~~~P~y~i~~~~~~~~~~~L~F~Ag   80 (125)
T PF09732_consen    1 WSDKYRPRKPRYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLIDKSKTPRYRIEPDEDNPDFCILRFHAG   80 (125)
T ss_pred             CCccCcccCCcEEEEEEecccccccchhccCCCCCCCceeeeeEEEEECCcccCCCCCCcEEEEECCCCCCEEEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999988999999999999


Q ss_pred             CCCcceeeeeecccccccCCCcccccccccccc
Q psy9531         365 PPYEDIAFKIVNREWEYSYKRGFRCHDETSATL  397 (409)
Q Consensus       365 PPYEDIAFrIVnrEWeys~krGFk~~F~rGi~~  397 (409)
                      ||||||||||||||||||+++||||+|++|||+
T Consensus        81 pPYeDIAFkIvnrEWd~s~k~Gfr~~Fd~gilq  113 (125)
T PF09732_consen   81 PPYEDIAFKIVNREWDYSHKRGFRCSFDRGILQ  113 (125)
T ss_pred             CCCcCEEEEEecCeeecCCCCCceEEeeCCEEE
Confidence            999999999999999999999999999999986

The Rel (NF-kappaB) pathway is conserved in invertebrates and vertebrates. In mammals, it controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development and in the establishment of dorsal-ventral polarity in the early embryo []. Most members of the family also have the conserved mid region of cactin (IPR018816 from INTERPRO) further upstream.

>PF10312 Cactin_mid: Conserved mid region of cactin; InterPro: IPR018816 This entry represents the conserved central domain of a family of proteins referred to as cactins

Probab=100.00  E-value=1.6e-50  Score=376.22  Aligned_cols=161  Identities=53%  Similarity=0.874  Sum_probs=149.4

Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHHHhhhhhhhccCCCChhhHHHhhcCCc----cccccccccchhHHhhcCCHHhHHHH
Q psy9531          83 QRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSE----AEVDAVEMHEPYTYLTGLAIKDLEDL  158 (409)
Q Consensus        83 qRerE~eq~~ew~~kEdeFhL~Qak~RS~IRI~eGRaKpIDlLAk~I~~~----~d~~dvel~ePy~v~~gLs~~dLEeL  158 (409)
                      ||++++++|++|++||++|||+||++||.|||++|||||||+||+||+..    +++++++|++||+||+|||++||++|
T Consensus         1 qR~~e~~~~~ew~~kE~~F~L~Qak~rs~iRi~egRaKpID~La~~l~~~~~~~~~~~~~~~~eP~~i~~gL~~~dleeL   80 (191)
T PF10312_consen    1 QREREAEQFEEWEAKEEEFHLEQAKKRSEIRIREGRAKPIDLLAKNLRIIDGEREDDLEIELHEPYTIFEGLSLEDLEEL   80 (191)
T ss_pred             CchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHhhccccccccccCcccCHHHHHhhCCHHHHHHH
Confidence            68999999999999999999999999999999999999999999999875    46788999999999999999999999


Q ss_pred             HHHHHHHHhhhc-CCchHHHHHHHHHHHHHHhhhhhhhhcCCCCccccccchhhHHHHHHhhcCCCCHHHHHHHHHHHHH
Q psy9531         159 LEDIKVYMELEK-GENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIEL  237 (409)
Q Consensus       159 ~eDIk~y~~LE~-~~n~efW~am~vIcedeL~kl~~~e~~~~~~~~~~~gi~~sV~~dI~~il~gKs~~eL~~Le~~I~~  237 (409)
                      .+||++|++||+ ..|.+||.+|++||+|+|+++++.++.+.   +.+.|||+||.+||++||+|||++||.+||.+|++
T Consensus        81 ~~dIk~y~~Le~~~~n~~fW~~~~~v~~del~~~~~~~~~~~---~~~~~ih~sV~~dI~~il~gKs~~eL~~Le~qI~~  157 (191)
T PF10312_consen   81 LEDIKVYLELERDNKNREFWEAMLVVCEDELAKLRKKEPEGR---AVRSGIHSSVAADIQKILSGKSYEELEELEQQIKA  157 (191)
T ss_pred             HHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhccccccc---chhhcccHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence            999999999999 45999999999999999999987554432   22579999999999999999999999999999999


Q ss_pred             HHhcCCCCCC
Q psy9531         238 KISSKTENID  247 (409)
Q Consensus       238 KL~s~~~~vD  247 (409)
                      ||+||++ +|
T Consensus       158 KL~s~~~-~D  166 (191)
T PF10312_consen  158 KLRSGEA-ID  166 (191)
T ss_pred             HhhcCCC-cc
Confidence            9999997 77

It contains two of three predicted coiled-coil motifs. Most proteins containing this domain also have IPR019134 from INTERPRO at the C-terminal end. Upstream of this domain in Drosophila proteins are a serine-rich region, some non-typical RD motifs and three predicted bipartite nuclear localisation signals, none of which are well-conserved. Cactin associates with IkappaB-cactus as one of the intracellular members of the Rel (NF-kappaB) pathway which is conserved in invertebrates and vertebrates. In mammals, this pathway controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development, and in the establishment of dorsal-ventral polarity in the early embryo [].

>KOG0227|consensus

Probab=91.80  E-value=0.14  Score=48.99  Aligned_cols=58  Identities=33%  Similarity=0.579  Sum_probs=45.3

Q ss_pred             cceeeeeeecccCCCCCCCCcEEEeec------CCCCCeEEEEEecCCCCcceeeeeecccccccC
Q psy9531         324 VQGYKFNIFYPDLIDKNSTPQYFLNTC------ADNQDFAILRFHAGPPYEDIAFKIVNREWEYSY  383 (409)
Q Consensus       324 VQGYKFNIFYPDLidktk~Pty~i~~~------~~~~dtciirF~AGPPYEDIAFrIVnrEWeys~  383 (409)
                      -||--|-|=||+..+ .-.|.|.....      +-+..+--|.|-| -|||-|||+|-++|-+.|.
T Consensus       129 q~~L~fQv~Yp~i~~-~~~Pr~rfmssyeq~ve~~dk~~qyLvfaa-ePyE~Iafk~p~~Eid~se  192 (222)
T KOG0227|consen  129 QQGLLFQVNYPEIEE-GIMPRHRFMSSYEQKVEPPDKSWQYLVFAA-EPYENIAFKVPSREIDKSE  192 (222)
T ss_pred             ceeeEEEecchhhhh-ccCCcchhhhhhHhhcCCccccceEEEEEe-ccccceeeecCchhhhhcc
Confidence            489999999999877 55777876642      2234577777755 6899999999999988886

>COG5246 PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification]

Probab=91.36  E-value=0.15  Score=48.52  Aligned_cols=57  Identities=32%  Similarity=0.571  Sum_probs=42.9

Q ss_pred             ceeeeeeecccCCCCCCCCcEEEeecC------CCCCeEEEEEecCCCCcceeeeeecccccccC
Q psy9531         325 QGYKFNIFYPDLIDKNSTPQYFLNTCA------DNQDFAILRFHAGPPYEDIAFKIVNREWEYSY  383 (409)
Q Consensus       325 QGYKFNIFYPDLidktk~Pty~i~~~~------~~~dtciirF~AGPPYEDIAFrIVnrEWeys~  383 (409)
                      -|-.|-|=|||-.- ...|.|+|...-      -+..|--|.|- --|||-|||+|-|+|-+++.
T Consensus       136 ~Gl~iqvnY~Dd~a-~~~P~yRivs~lEq~ve~~d~~f~yLV~a-~ePyEnIafk~~~~ei~f~s  198 (222)
T COG5246         136 RGLGIQVNYEDDLA-EEMPQYRIVSSLEQNVEEYDESFRYLVFA-CEPYENIAFKFENKEIDFLS  198 (222)
T ss_pred             eeeEEEEeccchhh-ccCcceehhhhhhhcchhhcccceEEEEE-eccccceeeecCCCccchhh
Confidence            58889999997543 468999998531      12346667664 57899999999999977765

>PF10312 Cactin_mid: Conserved mid region of cactin; InterPro: IPR018816 This entry represents the conserved central domain of a family of proteins referred to as cactins

Probab=87.60  E-value=1.3  Score=42.13  Aligned_cols=50  Identities=18%  Similarity=0.282  Sum_probs=39.7

Q ss_pred             chhHHhhcCCHHhHHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHhhh
Q psy9531         142 EPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGL  191 (409)
Q Consensus       142 ePy~v~~gLs~~dLEeL~eDIk~y~~LE~~~n~efW~am~vIcedeL~kl  191 (409)
                      +--.+|.|-|.++|.+|...|+.=+.=..+.+.+||++|+.-..-..+++
T Consensus       135 dI~~il~gKs~~eL~~Le~qI~~KL~s~~~~Dv~YWE~lL~~L~v~kAka  184 (191)
T PF10312_consen  135 DIQKILSGKSYEELEELEQQIKAKLRSGEAIDVEYWESLLKQLKVFKAKA  184 (191)
T ss_pred             HHHHHHccCCHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Confidence            34668999999999999999998865555789999999976665555554

It contains two of three predicted coiled-coil motifs. Most proteins containing this domain also have IPR019134 from INTERPRO at the C-terminal end. Upstream of this domain in Drosophila proteins are a serine-rich region, some non-typical RD motifs and three predicted bipartite nuclear localisation signals, none of which are well-conserved. Cactin associates with IkappaB-cactus as one of the intracellular members of the Rel (NF-kappaB) pathway which is conserved in invertebrates and vertebrates. In mammals, this pathway controls the activities of the immune and inflammatory response genes as well as viral genes, and is critical for cell growth and survival. In Drosophila, the Rel pathway functions in the innate cellular and humoral immune response, in muscle development, and in the establishment of dorsal-ventral polarity in the early embryo [].

>KOG1029|consensus

Probab=85.28  E-value=24  Score=40.61  Aligned_cols=82  Identities=18%  Similarity=0.270  Sum_probs=41.6

Q ss_pred             hcCCHHhHHHHHHHHHHHHhhh-c-CCchHHHHHHHHHHHHHHhhhhhhhhcCCCCccccccchhhHHHHHHhhcCCCCH
Q psy9531         148 TGLAIKDLEDLLEDIKVYMELE-K-GENEAYWNDISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFKGKTT  225 (409)
Q Consensus       148 ~gLs~~dLEeL~eDIk~y~~LE-~-~~n~efW~am~vIcedeL~kl~~~e~~~~~~~~~~~gi~~sV~~dI~~il~gKs~  225 (409)
                      ..|...++..|..-|+.+.+-= + .....-|++       .|...   .....+...+..-+++....  ..++..-=-
T Consensus       481 ~e~~isei~qlqarikE~q~kl~~l~~Ekq~l~~-------qlkq~---q~a~~~~~~~~s~L~aa~~~--ke~irq~ik  548 (1118)
T KOG1029|consen  481 RELMISEIDQLQARIKELQEKLQKLAPEKQELNH-------QLKQK---QSAHKETTQRKSELEAARRK--KELIRQAIK  548 (1118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-------HHHHh---hhhccCcchHHHHHHHHHHH--HHHHHHHHH
Confidence            3467788889999999886522 1 222223332       12111   11111111111223333222  233333345


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy9531         226 AQLEALQTQIELKISS  241 (409)
Q Consensus       226 ~eL~~Le~~I~~KL~s  241 (409)
                      ++|++|++.+++||.-
T Consensus       549 dqldelskE~esk~~e  564 (1118)
T KOG1029|consen  549 DQLDELSKETESKLNE  564 (1118)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            8899999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	409
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
4dgw_C	231	PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A	7e-04
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	8e-04

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 47/265 (17%), Positives = 104/265 (39%), Gaps = 35/265 (13%)

Query: 14   EDDNQRLVYARMQVQGTGSKVEARKKKKKKKKKKKKKKKKK-KNLCANVKKRRQEREAER 72
            E+   RL   + +++    ++EAR ++++++ ++ + +KKK +    +++++ +E EA R
Sbjct: 912  EEMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAAR 971

Query: 73   AEREEEMALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSE 132
             + + E           + ++ +        +  +L    ++ E R             +
Sbjct: 972  QKLQLEKV-----TADGKIKKMEDDILIMEDQNNKLTKERKLLEERVS-----------D 1015

Query: 133  AEVDAVEMHEPYTYLTGL------AIKDLEDLLEDI-KVYMELEK------GENEAYWND 179
               +  E  E    LT L       I +LE  L+   K   ELEK      GE+      
Sbjct: 1016 LTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQ 1075

Query: 180  ISIIVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASVFK--GKTTAQLEALQTQIEL 237
            I+ + + ++  L+    +   +L       E       +  K   +  + +  LQ  +E 
Sbjct: 1076 IAEL-QAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLES 1134

Query: 238  --KISSKTENIDNVITAEEKALQRE 260
                 +K E     ++ E +AL+ E
Sbjct: 1135 EKAARNKAEKQKRDLSEELEALKTE 1159

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 59/424 (13%), Positives = 112/424 (26%), Gaps = 128/424 (30%)

Query: 81  LTQRGKEAAQ--FEEWQRQE-----DQFHLE-QARLRSTIRIQEGRAKP---IDLLAKY- 128
           L  + +E  Q   EE  R            E +     T    E R +      + AKY 
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN 130

Query: 129 IGSEAEVDAVEMH------EPYTYLTG--------LAIKDLEDLLEDIKVYMELEKGENE 174
           +        +              + G        +A+    D+    KV     K + +
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL----DVCLSYKV---QCKMDFK 183

Query: 175 AYWNDISI----IVEDELHGLRKLEKQGHSDLTRREGIHESVAQDVASV-------FKGK 223
            +W  +++      E  L  L+KL  Q   + T R     ++   + S+        K K
Sbjct: 184 IFW--LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 224 TTAQ-------------LEA--LQTQIELKISSKTENIDNVITAEEKAL-QREARKGMGG 267
                              A  L  +I L  +   +  D +  A    +        +  
Sbjct: 242 PYENCLLVLLNVQNAKAWNAFNLSCKI-LLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300

Query: 268 DEAE--FS------VESL------LDPQVY-LWSDKYRPRKPRYFNRVHTGFEWNKYNQT 312
           DE +           + L       +P+   + ++  R               W+ +   
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT----------WDNWKHV 350

Query: 313 HYD---------MDNPPPKIVQGY--KFNIFYPDL-I-----------DKNSTPQYFLNT 349
           + D         ++   P   +    + ++F P   I              S     +N 
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 350 CA-------DNQDFAI----LRFHAGPPYEDIAF---KIVNREWEYSYKRGFRCHDETSA 395
                      ++  I    +        E+       IV+    Y+  + F   D    
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH---YNIPKTFDSDDLIPP 467

Query: 396 TLDS 399
            LD 
Sbjct: 468 YLDQ 471

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 47/337 (13%), Positives = 84/337 (24%), Gaps = 142/337 (42%)

Query: 51  KKKKKNLCANVKKRRQEREAERAEREEEMALTQRGKE----AAQFEEWQRQEDQFHLEQA 106
             + K+L       R +             L+   +      A ++ W+      H+   
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK------HVNCD 353

Query: 107 RLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAVEMHEPYTYLTGLAIKDLEDLLEDIKVYM 166
           +L + I                   E+ ++ +E  E       L++           +  
Sbjct: 354 KLTTII-------------------ESSLNVLEPAEYRKMFDRLSV-----FPPSAHIPT 389

Query: 167 ELEKGENEAYWND-ISIIVEDELHGLRK---LEKQGHSDLTRREGIHESVAQDVASVFKG 222
            L        W D I   V   ++ L K   +EKQ          I              
Sbjct: 390 ILL----SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS---IP------------- 429

Query: 223 KTTAQLEALQTQIELKISSKTENIDNVITAEEKALQREARKGMGGDEAEFSVESLLDPQV 282
                       I L++  K EN        E AL R                S++D   
Sbjct: 430 -----------SIYLELKVKLEN--------EYALHR----------------SIVD--- 451

Query: 283 YLWSDKYRPRKPRYFNRVHTGFEWNKYNQTHYDMDNPPPKIVQGYKFN-IFY----PDLI 337
                 Y   K                    +D D+  P  +  Y ++ I +     +  
Sbjct: 452 -----HYNIPK-------------------TFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

Query: 338 DKNST-PQYFLNTCADNQDFAILRF------HAGPPY 367
           ++ +     FL+           RF      H    +
Sbjct: 488 ERMTLFRMVFLD----------FRFLEQKIRHDSTAW 514

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 21/149 (14%)

Query: 199 HSDLTRREGIHESVAQDVASVFKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKALQ 258
           H  +    G H+   +D+ SVF+       +    Q   K     E ID++I   + A+ 
Sbjct: 4   HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII-MSKDAVS 62

Query: 259 REAR-----KGMGGDEAEFSVESLLDPQVYLW---SDKYRPRKPRYFNRVHTGFEWNKYN 310
              R          +  +  VE +L    Y +     K   R+P              Y 
Sbjct: 63  GTLRLFWTLLSKQEEMVQKFVEEVLRIN-YKFLMSPIKTEQRQP--------SMMTRMYI 113

Query: 311 QTHYDMDNPPPKIVQGYKFNIFYPDLIDK 339
           +    + N         K+N+       K
Sbjct: 114 EQRDRLYNDNQVFA---KYNVSRLQPYLK 139

>4dgw_C PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A {Saccharomyces cerevisiae} Length = 231

 Score = 40.1 bits (93), Expect = 7e-04
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 15/68 (22%)

Query: 325 QGYKFNIFYPDLIDKNS---------TPQY-FLN----TCADNQDFAILRFHAGPPYEDI 370
            G    + Y   + +NS          P    ++    +    +    L   A  P+E+I
Sbjct: 116 VGMAIQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLVI-AYEPFENI 174

Query: 371 AFKIVNRE 378
           A ++   E
Sbjct: 175 AIELPPNE 182

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 31/244 (12%), Positives = 71/244 (29%), Gaps = 29/244 (11%)

Query: 19   RLVYARMQVQGTGSKVEARKKKKKKKKKKKKKKKKKKNLCANVKKRRQEREAERAEREEE 78
            R  Y  M  +     ++   +    +    +  K    L    ++   +RE ++ + E  
Sbjct: 855  RNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEAR 914

Query: 79   MALTQRGKEAAQFEEWQRQEDQFHLEQARLRSTIRIQEGRAKPIDLLAKYIGSEAEVDAV 138
                      +     +       LE   ++   +I E   +   LL K    E      
Sbjct: 915  ----------SVERYKKLHIG---LENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYST- 960

Query: 139  EMHEPYTYLTGLAIKDLEDLLEDIKVYMELEKGENEAYWNDISIIVEDELHGLRKLEKQG 198
                          + L   +E +++  E E          +   +      L + + + 
Sbjct: 961  ------------ETEKLRSDVERLRM-SEEEAKNATNRVLSLQEEIAKLRKELHQTQTEK 1007

Query: 199  HSDLTRREGIHESVAQDVASV--FKGKTTAQLEALQTQIELKISSKTENIDNVITAEEKA 256
             +     +       Q V+ +         + E L  +I  +    TE ++  +  E K 
Sbjct: 1008 KTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQ 1067

Query: 257  LQRE 260
            L+ +
Sbjct: 1068 LELD 1071

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	409
4dgw_C	231	PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A	95.51

>4dgw_C PRE-mRNA-splicing factor PRP11; zinc finger; 3.11A {Saccharomyces cerevisiae}

Probab=95.51  E-value=0.021  Score=53.57  Aligned_cols=61  Identities=18%  Similarity=0.235  Sum_probs=46.7

Q ss_pred             ccceeeeeeecccCC---------CCCCCCcEEEeecCC-----CCCeEEEEEecCCCCcceeeeeecccccccCC
Q psy9531         323 IVQGYKFNIFYPDLI---------DKNSTPQYFLNTCAD-----NQDFAILRFHAGPPYEDIAFKIVNREWEYSYK  384 (409)
Q Consensus       323 ~VQGYKFNIFYPDLi---------dktk~Pty~i~~~~~-----~~dtciirF~AGPPYEDIAFrIVnrEWeys~k  384 (409)
                      --+|.=|.|-||+=|         ...-.|.++|-..-.     -.+.--|. .|.-|||-|||+|-|+|=+.+.+
T Consensus       114 gQ~GLLFQVdYPEeIk~~~~~~~~~egi~PrhRIMSAyEQrVE~PKd~QYLV-IAAEPYETIAFKIPNrEIDk~e~  188 (231)
T 4dgw_C          114 GSVGMAIQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLV-IAYEPFENIAIELPPNEILFSEN  188 (231)
T ss_dssp             CBCCEEEEEECCCSSSTTSCCSCSSTTCCCEEEEEETTCCSSCCCCCCEEEE-EECSSSCCBCCEECSSCSSCCSC
T ss_pred             CCeeEEEEEECChhhhhcccccccCCCCCcCEEEECHHHhcccCCCCCEEEE-EEeCCCCCceeEcCChhhccccc
Confidence            358999999999854         456799999986421     13444444 47789999999999999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00