Psyllid ID: psy9626

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-----
Protein Sequence
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Secondary Structure (PSIPRED)
cEEEEEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccEEcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mnailgtfhdksstIFWQCasrlplmeNVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGkldfhrrnpgfpgnlilSQSEldrigendinnYFQMSVEMFDYLDEILALQAAVFGE
Flexible Loop (DISEMBL)
mnailgtfhdksstiFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Low Complexity Region (SEG)
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Disordered region (IsUnstruct)
***ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVF**
Disordered Region (DISOPRED)
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFG*
Disordered Region (DISEMBL)
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Disordered Region (DISPRO)
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	145	2.2.26 [Sep-21-2011]
O00291	1037	Huntingtin-interacting pr	yes	N/A	0.965	0.135	0.5	2e-42
Q8VD75	1029	Huntingtin-interacting pr	yes	N/A	0.965	0.136	0.492	4e-42
O75146	1068	Huntingtin-interacting pr	no	N/A	0.965	0.131	0.471	3e-36
Q9JKY5	1068	Huntingtin-interacting pr	no	N/A	0.965	0.131	0.471	7e-33
Q02328	927	Huntington interacting pr	yes	N/A	0.958	0.149	0.397	9e-27
P33338	968	Protein SLA2 OS=Saccharom	yes	N/A	0.965	0.144	0.269	2e-10
Q9P6L5	1102	Endocytosis protein end4	yes	N/A	0.944	0.124	0.25	6e-07

>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5

 Score =  171 bits (432), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/140 (50%), Positives = 102/140 (72%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct: 64  ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYRNELSD 123

Query: 64  VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
           + +MW HL +GYG+L   Y +LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct: 124 MSRMWGHLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 183

Query: 124 MSVEMFDYLDEILALQAAVF 143
           ++VEMFDYL+  L L   VF
Sbjct: 184 LTVEMFDYLECELNLFQTVF 203

Plays a role in clathrin-mediated endocytosis and trafficking. Involved in regulating AMPA receptor trafficking in the central nervous system in an NMDA-dependent manner. Enhances androgen receptor (AR)-mediated transcription. May act as a proapoptotic protein that induces cell death by acting through the intrinsic apoptosis pathway. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis. May play a functional role in the cell filament networks. May be required for differentiation, proliferation, and/or survival of somatic and germline progenitors.
Homo sapiens (taxid: 9606)

>sp|Q8VD75|HIP1_MOUSE Huntingtin-interacting protein 1 OS=Mus musculus GN=Hip1 PE=1 SV=2

 Score =  169 bits (429), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/140 (49%), Positives = 102/140 (72%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct: 64  ILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 123

Query: 64  VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
           + +MW HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct: 124 MSRMWGHLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 183

Query: 124 MSVEMFDYLDEILALQAAVF 143
           ++VEMFDYL+  L L   VF
Sbjct: 184 LTVEMFDYLECELNLFQTVF 203

Plays a role in clathrin-mediated endocytosis and trafficking. Involved in regulating AMPA receptor trafficking in the central nervous system in an NMDA-dependent manner. Enhances androgen receptor (AR)-mediated transcription. May act as a proapoptotic protein that induces cell death by acting through the intrinsic apoptosis pathway. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis. May play a functional role in the cell filament networks. May be required for differentiation, proliferation, and/or survival of somatic and germline progenitors.

Mus musculus (taxid: 10090)

>sp|O75146|HIP1R_HUMAN Huntingtin-interacting protein 1-related protein OS=Homo sapiens GN=HIP1R PE=1 SV=2

 Score =  150 bits (379), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/140 (47%), Positives = 94/140 (67%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           ILGT H+K +  FW  A  LPL  + I++WKFCHVLHK+LR+GHP+V+ +  +    I  
Sbjct: 55  ILGTHHEKGAFTFWSYAIGLPLPSSSILSWKFCHVLHKVLRDGHPNVLHDCQRYRSNIRE 114

Query: 64  VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
           +G +W HL D YG+L+  YT+LLL K+ FH ++P FP  L ++   L++    D+NN FQ
Sbjct: 115 IGDLWGHLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQ 174

Query: 124 MSVEMFDYLDEILALQAAVF 143
           ++VEMFDY+D  L L  +VF
Sbjct: 175 LTVEMFDYMDCELKLSESVF 194

Component of clathrin-coated pits and vesicles, that may link the endocytic machinery to the actin cytoskeleton. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis.

Homo sapiens (taxid: 9606)

>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus GN=Hip1r PE=1 SV=2

 Score =  139 bits (349), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/140 (47%), Positives = 94/140 (67%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           ILGT H+K +  FW  A  LPL  + I++WKFCHVLHK+LR+GHP+V+ +  +    I  
Sbjct: 55  ILGTHHEKGAFTFWSYAIGLPLSSSSILSWKFCHVLHKVLRDGHPNVLHDYQRYRSNIRE 114

Query: 64  VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
           +G +W HL+D YG L+  YT+LLL K+ FH ++P FP  L ++   L++    D+NN FQ
Sbjct: 115 IGDLWGHLRDQYGHLVNIYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQ 174

Query: 124 MSVEMFDYLDEILALQAAVF 143
           ++VEMFDY+D  L L  +VF
Sbjct: 175 LTVEMFDYMDCELKLSESVF 194

Component of clathrin-coated pits and vesicles, that may link the endocytic machinery to the actin cytoskeleton. Binds 3-phosphoinositides (via ENTH domain). May act through the ENTH domain to promote cell survival by stabilizing receptor tyrosine kinases following ligand-induced endocytosis.

Mus musculus (taxid: 10090)

>sp|Q02328|SLAP2_CAEEL Huntington interacting protein related 1 OS=Caenorhabditis elegans GN=hipr-1 PE=3 SV=3

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 88/141 (62%), Gaps = 2/141 (1%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           I+GT  +KSS IFW    R+ L ++ ++ WKFCH++HK+LR+GH  V +E+ +     T 
Sbjct: 39  IVGTHKEKSSGIFWHTVGRIQLEKHPVLTWKFCHLVHKLLRDGHRKVPEETYRYVNRFTQ 98

Query: 64  VGKMWFHLK-DGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYF 122
           + + W HL   GYG  I  Y +LL  ++ FH + P  PG L L+ S+L  + E D++N F
Sbjct: 99  LSQFWKHLNTSGYGPCIESYCKLLHDRVTFHNKYPVVPGKLDLNDSQLKTL-EGDLDNMF 157

Query: 123 QMSVEMFDYLDEILALQAAVF 143
           +M+++M D +D +L LQ  V+
Sbjct: 158 EMTIDMLDQMDALLVLQDRVY 178

Caenorhabditis elegans (taxid: 6239)

>sp|P33338|SLA2_YEAST Protein SLA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLA2 PE=1 SV=5

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
           I+ T+  +SS   +     LPL  + +  +K   VLHKI++EGHP  + E+I+    I +
Sbjct: 32  IVYTWDHQSSKAVFTTLKTLPLANDEVQLFKMLIVLHKIIQEGHPSALAEAIRDRDWIRS 91

Query: 64  VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
           +G++       Y KLI +Y R L+ KLDFH  + GF       +  +  +  +D +  ++
Sbjct: 92  LGRV-HSGGSSYSKLIREYVRYLVLKLDFHAHHRGFNNGTFEYEEYVSLVSVSDPDEGYE 150

Query: 124 MSVEMFDYLDEILALQAAVFG 144
             +++    D +      +F 
Sbjct: 151 TILDLMSLQDSLDEFSQIIFA 171

Required for cellular morphogenesis and polarization of the cortical cytoskeleton. It might act in concert with proteins such as CDC42 and CDC43 to limit the region of cortical patch formation to the cortex of the bud. Required for the accumulation and/or maintenance of plasma membrane H(+)-ATPase on the cell surface.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9P6L5|SLA2_SCHPO Endocytosis protein end4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=end4 PE=1 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           + I+ T+   ++  FW      PL+ N +  +K    +H++L+EGH   + +S  +   +
Sbjct: 39  SCIIFTWDHHTARPFWTAIKVQPLLANEVQTFKALITIHRVLQEGHKSALVDSQSEKGWL 98

Query: 62  TNVGKMW--FHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNL----ILSQSELDRIGE 115
               + +       GY  LI  Y   LL KL FH ++P F G       +S  ++D    
Sbjct: 99  KTCERQYDGESSPKGYSDLIRDYVDYLLDKLSFHAQHPEFNGTFEYKEYISLRQVD---- 154

Query: 116 NDINNYFQMSVEMFDYLDEILALQAAVF 143
            D N  ++   +M +  D I   Q  +F
Sbjct: 155 -DPNEGYETVYDMMNLQDHIDEFQKQLF 181

Required for cellular morphogenesis and polarization of the cortical cytoskeleton. Required for establishment of new polarized growth zones where it acts in actin organization. Involved plasma membrane internalization and is essential for fluid-phase endocytosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
328699658	894	PREDICTED: huntingtin-interacting protei	0.986	0.159	0.678	2e-58
328699660	885	PREDICTED: huntingtin-interacting protei	0.986	0.161	0.678	2e-58
242007590	992	Huntingtin-interacting protein, putative	0.986	0.144	0.650	3e-54
307207937	959	Huntingtin-interacting protein 1 [Harpeg	0.986	0.149	0.629	5e-50
332018143	892	Huntingtin-interacting protein 1 [Acromy	0.986	0.160	0.622	1e-48
91091170	964	PREDICTED: similar to huntingtin interac	0.986	0.148	0.615	1e-48
322790281	940	hypothetical protein SINV_12725 [Solenop	0.986	0.152	0.622	1e-48
345481800	967	PREDICTED: huntingtin-interacting protei	0.979	0.146	0.626	2e-48
345481802	955	PREDICTED: huntingtin-interacting protei	0.979	0.148	0.626	2e-48
357603730	1350	putative huntingtin interacting protein	0.979	0.105	0.577	3e-48

>gi|328699658|ref|XP_001949271.2| PREDICTED: huntingtin-interacting protein 1-like isoform 1 [Acyrthosiphon pisum]

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 122/143 (85%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           NAI+GTF +KS+  FW+C ++LPL E+ IVAWKFCHVLHK+LREGHP+V+  S +   ++
Sbjct: 50  NAIIGTFQEKSAETFWRCVTKLPLQEHRIVAWKFCHVLHKVLREGHPNVLASSQRHKTLL 109

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HLKDGYGKLI QY +LLL KLDFHRRNPGFPGNL+LS+ +L RIG+ND+NNY
Sbjct: 110 HDLGKLWVHLKDGYGKLIQQYCQLLLTKLDFHRRNPGFPGNLVLSEEDLCRIGDNDVNNY 169

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQM VEMFDY+DEIL LQ+A+FG
Sbjct: 170 FQMCVEMFDYIDEILGLQSAIFG 192

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699660|ref|XP_003241007.1| PREDICTED: huntingtin-interacting protein 1-like isoform 2 [Acyrthosiphon pisum]

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 122/143 (85%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           NAI+GTF +KS+  FW+C ++LPL E+ IVAWKFCHVLHK+LREGHP+V+  S +   ++
Sbjct: 41  NAIIGTFQEKSAETFWRCVTKLPLQEHRIVAWKFCHVLHKVLREGHPNVLASSQRHKTLL 100

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HLKDGYGKLI QY +LLL KLDFHRRNPGFPGNL+LS+ +L RIG+ND+NNY
Sbjct: 101 HDLGKLWVHLKDGYGKLIQQYCQLLLTKLDFHRRNPGFPGNLVLSEEDLCRIGDNDVNNY 160

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQM VEMFDY+DEIL LQ+A+FG
Sbjct: 161 FQMCVEMFDYIDEILGLQSAIFG 183

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242007590|ref|XP_002424620.1| Huntingtin-interacting protein, putative [Pediculus humanus corporis] gi|212508071|gb|EEB11882.1| Huntingtin-interacting protein, putative [Pediculus humanus corporis]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 116/143 (81%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           + I+GTF +K    FW   S+LPL +N IVAWKFCHVLHK+LREGHP V+  S K  ++I
Sbjct: 50  STIIGTFREKGGKTFWLVVSKLPLQDNRIVAWKFCHVLHKVLREGHPQVVVHSQKHREMI 109

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HL++GYGKLI  YT+ LL KLDFHRRNP FP NL++S+ EL+ IGENDINNY
Sbjct: 110 QDLGKLWCHLREGYGKLIQHYTQFLLTKLDFHRRNPRFPANLVVSEEELESIGENDINNY 169

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQMSVEMFDY+D+IL+LQ+AVFG
Sbjct: 170 FQMSVEMFDYMDDILSLQSAVFG 192

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207937|gb|EFN85496.1| Huntingtin-interacting protein 1 [Harpegnathos saltator]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 90/143 (62%), Positives = 113/143 (79%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           +AI+GT+ +KS +IFW    R PL EN IVAWKFCHVLHK+LREGHP VI +S +    +
Sbjct: 37  SAIIGTYREKSGSIFWTYMLRQPLQENQIVAWKFCHVLHKVLREGHPRVIIDSQRYRGKL 96

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HL++GYG+LI  YTRLL+ KLD+H+RNP  PGNL ++  EL+ IGENDIN Y
Sbjct: 97  EDIGKLWQHLREGYGRLIQLYTRLLITKLDYHKRNPRLPGNLQVTSEELEAIGENDINVY 156

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQMSVEMFDY+D+IL LQ AVFG
Sbjct: 157 FQMSVEMFDYMDDILNLQHAVFG 179

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018143|gb|EGI58752.1| Huntingtin-interacting protein 1 [Acromyrmex echinatior]

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 111/143 (77%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           +AI+GT+ +KS  IFW    R PL EN IVAWKFCHVLHK+LREGHP VI +S +    +
Sbjct: 36  SAIIGTYREKSGCIFWTYMLRQPLQENQIVAWKFCHVLHKVLREGHPRVIVDSQRYRGKL 95

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HL++GYG+LI  Y RLL+ KLD+H+RNP  PGNL ++  EL+ IGENDIN Y
Sbjct: 96  EDIGKLWQHLREGYGRLIQLYARLLITKLDYHKRNPRLPGNLQVTPEELEAIGENDINIY 155

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQMSVEMFDY+D+IL LQ AVFG
Sbjct: 156 FQMSVEMFDYMDDILNLQHAVFG 178

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091170|ref|XP_971489.1| PREDICTED: similar to huntingtin interacting protein 1 [Tribolium castaneum] gi|270013124|gb|EFA09572.1| hypothetical protein TcasGA2_TC011686 [Tribolium castaneum]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 110/143 (76%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           +AI+GTFH + +T FW  A +LP M++ IVAWK CHV+HKILREGHP  +  S +    +
Sbjct: 50  SAIIGTFHTQGATTFWSIALKLPAMDDRIVAWKLCHVVHKILREGHPLCLVHSQRHRHDL 109

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
             +GK+W HLK+GYGK+I  YT LL+ KLDFHR+NP FPG+L +S  EL+ IG NDINNY
Sbjct: 110 DEIGKLWVHLKEGYGKMIRLYTSLLMTKLDFHRKNPRFPGHLGVSHEELESIGGNDINNY 169

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQM+VEMFDYLD I+ LQAAVFG
Sbjct: 170 FQMTVEMFDYLDNIIDLQAAVFG 192

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790281|gb|EFZ15280.1| hypothetical protein SINV_12725 [Solenopsis invicta]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 112/143 (78%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           +AI+GT+ +KS +IFW    R PL EN IVAWKFCHVLHK+LREGH  VI +S +    +
Sbjct: 22  SAIIGTYREKSGSIFWTYMLRQPLQENQIVAWKFCHVLHKVLREGHSRVIVDSQRYRGKL 81

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            ++GK+W HL++GYG+LI  YTRLL+ KLD+H+RNP  PGNL ++  EL+ IGENDIN Y
Sbjct: 82  EDIGKLWQHLREGYGRLIQLYTRLLVTKLDYHKRNPRLPGNLQVTPEELEAIGENDINIY 141

Query: 122 FQMSVEMFDYLDEILALQAAVFG 144
           FQMSVEMFDY+D+IL LQ AVFG
Sbjct: 142 FQMSVEMFDYMDDILNLQHAVFG 164

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481800|ref|XP_001604846.2| PREDICTED: huntingtin-interacting protein 1 isoform 1 [Nasonia vitripennis]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 109/142 (76%)

Query: 3   AILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVIT 62
           AI+GTF +K + IFW    R  L EN IVAWKFCHVLHKILREGHP VI +S +    + 
Sbjct: 49  AIIGTFKEKGANIFWTYVLRQQLQENRIVAWKFCHVLHKILREGHPRVIHDSQRHRGKLE 108

Query: 63  NVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYF 122
           ++GK+W HL+D YG+LI+ Y RLL+ KLDFH+RNP  PGNL ++  EL+ IGENDIN YF
Sbjct: 109 DIGKLWQHLRDEYGRLIHLYIRLLITKLDFHKRNPRMPGNLQVTTEELEAIGENDINVYF 168

Query: 123 QMSVEMFDYLDEILALQAAVFG 144
           QM+VEMFDY+D+IL LQ AVFG
Sbjct: 169 QMTVEMFDYMDDILNLQQAVFG 190

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481802|ref|XP_003424458.1| PREDICTED: huntingtin-interacting protein 1 isoform 2 [Nasonia vitripennis]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/142 (62%), Positives = 109/142 (76%)

Query: 3   AILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVIT 62
           AI+GTF +K + IFW    R  L EN IVAWKFCHVLHKILREGHP VI +S +    + 
Sbjct: 37  AIIGTFKEKGANIFWTYVLRQQLQENRIVAWKFCHVLHKILREGHPRVIHDSQRHRGKLE 96

Query: 63  NVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYF 122
           ++GK+W HL+D YG+LI+ Y RLL+ KLDFH+RNP  PGNL ++  EL+ IGENDIN YF
Sbjct: 97  DIGKLWQHLRDEYGRLIHLYIRLLITKLDFHKRNPRMPGNLQVTTEELEAIGENDINVYF 156

Query: 123 QMSVEMFDYLDEILALQAAVFG 144
           QM+VEMFDY+D+IL LQ AVFG
Sbjct: 157 QMTVEMFDYMDDILNLQQAVFG 178

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357603730|gb|EHJ63897.1| putative huntingtin interacting protein 1 [Danaus plexippus]

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/142 (57%), Positives = 109/142 (76%)

Query: 2   NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           + I+GTF ++S+  +W  A RLPL +N IV+WKFCHV HK+LREGHP  + +S +   +I
Sbjct: 34  STIIGTFQEQSAVTYWMVAVRLPLQDNRIVSWKFCHVTHKLLREGHPACLDDSQRHINMI 93

Query: 62  TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNY 121
            N+GK+W HL++GYG+LI  Y +LL+ KL FH RNP FPGN+ L+  ELD I END+NNY
Sbjct: 94  ENLGKLWVHLREGYGRLISLYCKLLVTKLKFHSRNPRFPGNMQLTVEELDAIAENDVNNY 153

Query: 122 FQMSVEMFDYLDEILALQAAVF 143
           FQ+ VE+FDY+D+IL LQAAVF
Sbjct: 154 FQLCVELFDYMDDILQLQAAVF 175

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	145
ZFIN|ZDB-GENE-010328-15	1048	hip1 "huntingtin interacting p	0.965	0.133	0.528	3.6e-39
UNIPROTKB|F1PB24	981	HIP1 "Uncharacterized protein"	0.965	0.142	0.507	2.2e-38
UNIPROTKB|J9PA31	1000	HIP1 "Uncharacterized protein"	0.965	0.14	0.507	2.3e-38
UNIPROTKB|O00291	1037	HIP1 "Huntingtin-interacting p	0.965	0.135	0.5	5.3e-38
UNIPROTKB|F1RKC0	998	HIP1 "Uncharacterized protein"	0.965	0.140	0.5	6.2e-38
UNIPROTKB|E1C5D5	1037	HIP1 "Uncharacterized protein"	0.965	0.135	0.507	6.7e-38
UNIPROTKB|F1MWF0	1037	HIP1 "Uncharacterized protein"	0.965	0.135	0.492	1.4e-37
MGI|MGI:1099804	1029	Hip1 "huntingtin interacting p	0.965	0.136	0.492	1.8e-37
UNIPROTKB|G3V8Y8	1030	Hip1 "Protein Hip1" [Rattus no	0.965	0.135	0.492	1.8e-37
UNIPROTKB|E1C6I0	1010	HIP1 "Uncharacterized protein"	0.917	0.131	0.496	6.4e-35

ZFIN|ZDB-GENE-010328-15 hip1 "huntingtin interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 429 (156.1 bits), Expect = 3.6e-39, P = 3.6e-39
 Identities = 74/140 (52%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+VIK+S++    + +
Sbjct:    64 ILGTHHEKGAHTFWLAVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVIKDSMRHKADLND 123

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYGKL   Y +LL+ K++FH +NP FPGNL +S  +LD  GEND+NN+FQ
Sbjct:   124 MSRMWGHLSEGYGKLCSIYLKLLITKMEFHIKNPRFPGNLQMSNRQLDEAGENDVNNFFQ 183

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   184 LTVEMFDYLECELNLFLGVF 203

GO:0003779 "actin binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0009790 "embryo development" evidence=IMP

UNIPROTKB|F1PB24 HIP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 421 (153.3 bits), Expect = 2.2e-38, P = 2.2e-38
 Identities = 71/140 (50%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    25 ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 84

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y RLL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:    85 MSRMWGHLSEGYGQLCSIYLRLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 144

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   145 LTVEMFDYLECELNLFQTVF 164

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|J9PA31 HIP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 421 (153.3 bits), Expect = 2.3e-38, P = 2.3e-38
 Identities = 71/140 (50%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    28 ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 87

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y RLL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:    88 MSRMWGHLSEGYGQLCSIYLRLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 147

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   148 LTVEMFDYLECELNLFQTVF 167

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|O00291 HIP1 "Huntingtin-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 418 (152.2 bits), Expect = 5.3e-38, P = 5.3e-38
 Identities = 70/140 (50%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    64 ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYRNELSD 123

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y +LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:   124 MSRMWGHLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 183

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   184 LTVEMFDYLECELNLFQTVF 203

GO:0003779 "actin binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006917 "induction of apoptosis" evidence=IDA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IMP

GO:0030136 "clathrin-coated vesicle" evidence=IDA

GO:0048268 "clathrin coat assembly" evidence=IDA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0005856 "cytoskeleton" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006915 "apoptotic process" evidence=IDA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IDA

GO:0030276 "clathrin binding" evidence=IDA

GO:0042981 "regulation of apoptotic process" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|F1RKC0 HIP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 417 (151.9 bits), Expect = 6.2e-38, P = 6.2e-38
 Identities = 70/140 (50%), Positives = 101/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    25 ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 84

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y  LL  K+++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:    85 MSRMWGHLSEGYGQLCSTYLTLLRTKMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 144

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   145 LTVEMFDYLECELNLFQTVF 164

GO:0048268 "clathrin coat assembly" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|E1C5D5 HIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 417 (151.9 bits), Expect = 6.7e-38, P = 6.7e-38
 Identities = 71/140 (50%), Positives = 101/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GH +V+K+S++    +++
Sbjct:    63 ILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSD 122

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y +LL  K++FH +NP FPGNL +S  +LD  GEND+NN+FQ
Sbjct:   123 MSRMWGHLSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQ 182

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   183 LTVEMFDYLECELNLFQTVF 202

GO:0003779 "actin binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0048268 "clathrin coat assembly" evidence=IEA

UNIPROTKB|F1MWF0 HIP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 414 (150.8 bits), Expect = 1.4e-37, P = 1.4e-37
 Identities = 69/140 (49%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    64 ILGTHHEKGAQTFWSVVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVLKDSLRYKSELSD 123

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y +LL  K+++H +NP FPGNL +S  +L+  GE+D+NN+FQ
Sbjct:   124 MSRMWGHLSEGYGQLCSIYLKLLRTKMEYHTKNPRFPGNLHMSDRQLEEAGESDVNNFFQ 183

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   184 LTVEMFDYLECELNLFQTVF 203

GO:0048268 "clathrin coat assembly" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

MGI|MGI:1099804 Hip1 "huntingtin interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 413 (150.4 bits), Expect = 1.8e-37, P = 1.8e-37
 Identities = 69/140 (49%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    64 ILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 123

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:   124 MSRMWGHLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 183

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   184 LTVEMFDYLECELNLFQTVF 203

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006897 "endocytosis" evidence=IDA

GO:0006915 "apoptotic process" evidence=ISO

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0008219 "cell death" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=ISO

GO:0030154 "cell differentiation" evidence=IEA

GO:0030276 "clathrin binding" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=ISO

GO:0042981 "regulation of apoptotic process" evidence=ISO

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=ISO;IMP

GO:0048268 "clathrin coat assembly" evidence=ISO

UNIPROTKB|G3V8Y8 Hip1 "Protein Hip1" [Rattus norvegicus (taxid:10116)]

 Score = 413 (150.4 bits), Expect = 1.8e-37, P = 1.8e-37
 Identities = 69/140 (49%), Positives = 102/140 (72%)

Query:     4 ILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITN 63
             ILGT H+K +  FW   +RLPL  N ++ WKFCHV HK+LR+GHP+V+K+S++    +++
Sbjct:    64 ILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNELSD 123

Query:    64 VGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQ 123
             + +MW HL +GYG+L   Y +LL  ++++H +NP FPGNL +S  +LD  GE+D+NN+FQ
Sbjct:   124 MSRMWGHLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNNFFQ 183

Query:   124 MSVEMFDYLDEILALQAAVF 143
             ++VEMFDYL+  L L   VF
Sbjct:   184 LTVEMFDYLECELNLFQTVF 203

GO:0003779 "actin binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030276 "clathrin binding" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0048260 "positive regulation of receptor-mediated endocytosis" evidence=IEA

GO:0048268 "clathrin coat assembly" evidence=IEA

UNIPROTKB|E1C6I0 HIP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 389 (142.0 bits), Expect = 6.4e-35, P = 6.4e-35
 Identities = 66/133 (49%), Positives = 95/133 (71%)

Query:    11 KSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFH 70
             K +  FW   +RLPL  N ++ WKFCHV HK+LR+GH +V+K+S++    ++++ +MW H
Sbjct:    66 KGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGH 125

Query:    71 LKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFD 130
             L +GYG+L   Y +LL  K++FH +NP FPGNL +S  +LD  GEND+NN+FQ++VEMFD
Sbjct:   126 LSEGYGQLCSIYLKLLRTKMEFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFD 185

Query:   131 YLDEILALQAAVF 143
             YL+  L L   VF
Sbjct:   186 YLECELNLFQTVF 198

GO:0003779 "actin binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	145
pfam07651	278	pfam07651, ANTH, ANTH domain	1e-31
smart00273	127	smart00273, ENTH, Epsin N-terminal homology (ENTH)	5e-22
cd03564	117	cd03564, ANTH_AP180_CALM, ANTH domain family; comp	4e-16

>gnl|CDD|219498 pfam07651, ANTH, ANTH domain

 Score =  113 bits (285), Expect = 1e-31
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 11/148 (7%)

Query: 3   AILGTFHD--KSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQV 60
            IL       K + +FW  + RLPL  N +VA K   ++HK+LREGHP V++E ++  + 
Sbjct: 26  EILVGTSSPAKVAALFWALSRRLPLTRNWVVALKALILVHKLLREGHPSVLQELLRARRR 85

Query: 61  ITNVGKMW-----FHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGE 115
           I+++ ++        L   YG  I  Y + L  +LDFHR+ P  P      +    R   
Sbjct: 86  ISSLLRISSFDDSMSLTWDYGAFIRAYAKYLDERLDFHRKLPRDP-TFERVEYGSLRAV- 143

Query: 116 NDINNYFQMSVEMFDYLDEILALQAAVF 143
            D N+ + MS  M D LD I  LQ  + 
Sbjct: 144 GDPNSRYTMS--MEDLLDIIPKLQKLLD 169

AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats. Length = 278

>gnl|CDD|214594 smart00273, ENTH, Epsin N-terminal homology (ENTH) domain

 Score = 84.6 bits (210), Expect = 5e-22
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 4   ILGTFHDKSSTIFWQCASRLPLME--NVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI 61
           I GT ++KSS           L +  N  V +K   +LH +LR G P VI E+++    I
Sbjct: 27  IQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSPRVILEALRNRNRI 86

Query: 62  TNVGKMWFHLKDG--YGKLIYQYTRLLLGKLDFHRRNPGFP 100
            N+         G   G  I  Y + LL +L+  RR     
Sbjct: 87  LNLSDFQDIDSRGKDQGANIRTYAKYLLERLEDDRRLKEER 127

Length = 127

>gnl|CDD|239622 cd03564, ANTH_AP180_CALM, ANTH domain family; composed of adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins

 Score = 69.2 bits (170), Expect = 4e-16
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 4   ILGTFHDKSST-IFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVIT 62
           I GT    +S   F    SR  L  N +V  K   +LH++LREGHP  ++E + +   + 
Sbjct: 25  IAGTSSSPASIPSFASALSRRLLDRNWVVVLKALILLHRLLREGHPSFLQELLSRRGWLN 84

Query: 63  NVGKMW--FHLKDGYGKLIYQYTRLLLGKLDFH 93
               +     L  GY   I  Y R L  +L FH
Sbjct: 85  LSNFLDKSSSLGYGYSAFIRAYARYLDERLSFH 117

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that the ANTH domain is a universal component of the machinery for clathrin-mediated membrane budding. Length = 117

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	145
KOG0980|consensus	980		100.0
PF07651	280	ANTH: ANTH domain; InterPro: IPR011417 AP180 is an	99.96
cd03564	117	ANTH_AP180_CALM ANTH domain family; composed of ad	99.87
smart00273	127	ENTH Epsin N-terminal homology (ENTH) domain.	99.72
PF01417	125	ENTH: ENTH domain; InterPro: IPR001026 The ENTH (E	97.97
KOG0251|consensus	491		97.46
cd03571	123	ENTH_epsin ENTH domain, Epsin family; The epsin (E	95.65
cd00197	115	VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamil	90.97
cd03572	122	ENTH_epsin_related ENTH domain, Epsin Related fami	87.55

>KOG0980|consensus

Probab=100.00  E-value=6.1e-63  Score=454.16  Aligned_cols=143  Identities=48%  Similarity=0.912  Sum_probs=137.9

Q ss_pred             eEEEeecCCCchhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccCCCccchhHHH
Q psy9626           2 NAILGTFHDKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLKDGYGKLIYQ   81 (145)
Q Consensus         2 ~~Iv~T~~~ksa~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~~~gYG~lI~~   81 (145)
                      +||||||+||||++||+.++++||++|+|+||||||++|||||||||+||+||+||++||.+|||+|+|+++|||+||++
T Consensus        29 t~I~gTh~eksa~~FWt~ik~~PL~~~~VltwKfchllHKvLreGHpsal~es~r~r~~i~~l~r~w~~ls~~Yg~lI~~  108 (980)
T KOG0980|consen   29 TIIVGTHDEKSSKIFWTTIKRQPLENHEVLTWKFCHLLHKVLREGHPSALEESQRYKKWITQLGRMWGHLSDGYGPLIRA  108 (980)
T ss_pred             heeeeecccccchhHHHHhhccccccchHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhccccccchHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCeeechhhhcccccCCCchhHHHHHHHhhhHHHHHHHHHhhhCC
Q psy9626          82 YTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFGE  145 (145)
Q Consensus        82 Y~~lL~~Kl~FH~khp~fpG~le~~e~~l~~~~~~D~n~~fq~~~dlmd~~D~i~~lq~~Vf~~  145 (145)
                      |||||++||.||.|||+|||||+|+++++... +.|||++||||+|||||||+|+.||++||+.
T Consensus       109 Y~klL~~Kl~FH~k~p~FpGtle~s~~~l~~a-v~D~n~~feltvdmmd~~D~ll~lq~~vF~s  171 (980)
T KOG0980|consen  109 YVKLLHDKLSFHAKHPVFPGTLEYSDYQLLTA-VDDLNNGFELTVDMMDYMDSLLELQQTVFSS  171 (980)
T ss_pred             HHHHHHHHHhHhhcCCCCCCCccccHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999855554 5599999999999999999999999999973

>PF07651 ANTH: ANTH domain; InterPro: IPR011417 AP180 is an endocytotic accessory protein that has been implicated in the formation of clathrin-coated pits

Probab=99.96  E-value=9.2e-31  Score=213.99  Aligned_cols=139  Identities=29%  Similarity=0.482  Sum_probs=106.5

Q ss_pred             EEEeecC-CCchhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcc-----cCCCccc
Q psy9626           3 AILGTFH-DKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWF-----HLKDGYG   76 (145)
Q Consensus         3 ~Iv~T~~-~ksa~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~-----~~~~gYG   76 (145)
                      ||.+||. ++.+..||..++|+|..+|.+|+||+|+++||+||||||++..++.++..++.+++++|+     ....+||
T Consensus        27 il~~t~~~~~~~~~~~~l~~Rl~~~~~w~V~~K~Lil~H~llr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (280)
T PF07651_consen   27 ILSATSSPESVAFLFWALSRRLPLTRNWIVALKALILLHRLLRDGHPSFLQELLRYNRRLFDLSNIWDFDDSSSKSWDYS  106 (280)
T ss_dssp             HHHHCSTTS-HHHHHHHHHHHCTSS-SHHHHHHHHHHHHHHHHHS-CHHHHHHHHTT-----TT---T---SSCHHHHHH
T ss_pred             HHHHhcCCccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcCchHHHHHHHHcccchhhhccccccccCCccccchh
Confidence            6788999 999999999999999999999999999999999999999999999999999999999999     2356799


Q ss_pred             hhHHHHHHHHHHHHhhhccCCCCCCCeeechhhhcccccCCCchhHHHHHHHhhhHHHHHHHHHhhhC
Q psy9626          77 KLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFG  144 (145)
Q Consensus        77 ~lI~~Y~~lL~~Kl~FH~khp~fpG~le~~e~~l~~~~~~D~n~~fq~~~dlmd~~D~i~~lq~~Vf~  144 (145)
                      .+|+.|++||..|+.||++++.+||+++.+++ .+....++++.+  .++++++++|.+..+|+.+++
T Consensus       107 ~~ir~Y~~yL~~rl~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~--~~~~~~~lL~~l~~lq~ll~~  171 (280)
T PF07651_consen  107 AFIRAYAKYLDERLSFHRKLKIDPGNLEREEE-GSLVSRDDPNSR--KSLDIDDLLDQLPKLQRLLDR  171 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSS----CCCS---S-----TTSHCC---C--HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHccccccccccccc-cccccccCcccc--ccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999887 455566777766  999999999999999999874

The domain is involved in phosphatidylinositol 4,5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats [, ].; GO: 0005543 phospholipid binding; PDB: 1HX8_A 3ZYM_A 1HFA_A 1HG2_A 3ZYL_B 3ZYK_A 1HG5_A 1HF8_A.

>cd03564 ANTH_AP180_CALM ANTH domain family; composed of adaptor protein 180 (AP180), clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins

Probab=99.87  E-value=6.4e-23  Score=150.64  Aligned_cols=91  Identities=32%  Similarity=0.396  Sum_probs=87.3

Q ss_pred             EEEeecC-CCchhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhH
Q psy9626           3 AILGTFH-DKSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLI   79 (145)
Q Consensus         3 ~Iv~T~~-~ksa~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI   79 (145)
                      ||.+||. +.++..||+.+.++|..+|.+++||+|+++|++||||||+++.++.+++++|+..+..|...  ..+||.+|
T Consensus        24 ii~~t~~~~~~~~~~~~~l~~Rl~~~~w~v~~K~LillH~llr~G~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~V  103 (117)
T cd03564          24 IIAGTSSSPASIPSFASALSRRLLDRNWVVVLKALILLHRLLREGHPSFLQELLSRRGWLNLSNFLDKSSSLGYGYSAFI  103 (117)
T ss_pred             HHHHHcCCCCCHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhcCCHHHHHHHHHccCeeeccccccCCCCCchhhhHHH
Confidence            6788999 89999999999999999999999999999999999999999999999999999999999985  67899999


Q ss_pred             HHHHHHHHHHHhhh
Q psy9626          80 YQYTRLLLGKLDFH   93 (145)
Q Consensus        80 ~~Y~~lL~~Kl~FH   93 (145)
                      +.|++||.+|++||
T Consensus       104 r~Ya~yL~~rl~~~  117 (117)
T cd03564         104 RAYARYLDERLSFH  117 (117)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999998

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins, and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that the ANTH domain is a universal component of the machine

>smart00273 ENTH Epsin N-terminal homology (ENTH) domain

Probab=99.72  E-value=3.6e-18  Score=126.54  Aligned_cols=98  Identities=29%  Similarity=0.295  Sum_probs=88.9

Q ss_pred             EEEeecCCCchhhHHhhhcccccCCC--chhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchh
Q psy9626           3 AILGTFHDKSSTIFWQCASRLPLMEN--VIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKL   78 (145)
Q Consensus         3 ~Iv~T~~~ksa~~Fw~~~~~~Pl~~~--~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~l   78 (145)
                      |+.+|++.+++..+|..+...+|.++  .+++||+|++||++||+|+|.++.+++++...|.+|.++|...  +.+||..
T Consensus        26 I~~~t~~~~~~~~~i~~~l~~Rl~~~~~w~~v~KsL~llh~ll~~G~~~~~~~~~~~~~~i~~L~~f~~~~~~~~d~g~~  105 (127)
T smart00273       26 IIQGTHNEKSSFAEIMAVLWRRLNDTKNWRVVYKALILLHYLLRNGSPRVILEALRNRNRILNLSDFQDIDSRGKDQGAN  105 (127)
T ss_pred             HHHHHccCHhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHhcCCHHHHHHHHHhhHHHhhHhhCeecCCCCeeCcHH
Confidence            56789999888888888888888765  9999999999999999999999999999999999999999753  5679999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCC
Q psy9626          79 IYQYTRLLLGKLDFHRRNPGFP  100 (145)
Q Consensus        79 I~~Y~~lL~~Kl~FH~khp~fp  100 (145)
                      |+.|+++|..++.||.++++++
T Consensus       106 VR~ya~~L~~~l~~~~~l~~er  127 (127)
T smart00273      106 IRTYAKYLLERLEDDRRLKEER  127 (127)
T ss_pred             HHHHHHHHHHHHcCHHHHhccC
Confidence            9999999999999999988753

>PF01417 ENTH: ENTH domain; InterPro: IPR001026 The ENTH (Epsin N-terminal homology) domain is approximately 150 amino acids in length and is always found located at the N-termini of proteins

Probab=97.97  E-value=2.2e-05  Score=57.96  Aligned_cols=85  Identities=14%  Similarity=0.156  Sum_probs=68.2

Q ss_pred             eecCCCchhhHHhhhcccc---cCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhHH
Q psy9626           6 GTFHDKSSTIFWQCASRLP---LMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLIY   80 (145)
Q Consensus         6 ~T~~~ksa~~Fw~~~~~~P---l~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI~   80 (145)
                      .|++.+++...+..+.++=   =.++..+.+|+|.+++-+|+.|++.++.+.+++..-|+.|..+....  +..+|..|+
T Consensus        30 ~t~~~~~~~~I~~~l~kRL~~~~~k~wr~~~KaL~ll~yLl~nG~~~~~~~~~~~~~~I~~l~~f~~~d~~g~d~~~~VR  109 (125)
T PF01417_consen   30 LTYNSKDCQEIMDVLWKRLSKSDGKNWRHVYKALTLLEYLLKNGSERFVDELRDHIDIIRELQDFQYVDPKGKDQGQNVR  109 (125)
T ss_dssp             HTTSCHHHHHHHHHHHHHHHSSTSSGHHHHHHHHHHHHHHHHHS-HHHHHHHHHTHHHHHGGGG---BBTTSTBHHHHHH
T ss_pred             HHhccccHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcceeeccCCCCccHHHHHH
Confidence            4677777888888776653   56788999999999999999999999999999999999999887732  345788999


Q ss_pred             HHHHHHHHHH
Q psy9626          81 QYTRLLLGKL   90 (145)
Q Consensus        81 ~Y~~lL~~Kl   90 (145)
                      ..++-+..-|
T Consensus       110 ~~A~~i~~lL  119 (125)
T PF01417_consen  110 EKAKEILELL  119 (125)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999888755

The domain forms a compact globular structure, composed of 9 alpha-helices connected by loops of varying length. The general topology is determined by three helical hairpins that are stacked consecutively with a right hand twist []. An N-terminal helix folds back, forming a deep basic groove that forms the binding pocket for the Ins(1,4,5)P3 ligand []. The ligand is coordinated by residues from surrounding alpha-helices and all three phosphates are multiply coordinated. The coordination of Ins(1,4,5)P3 suggests that ENTH is specific for particular head groups. Proteins containing this domain have been found to bind PtdIns(4,5)P2 and PtdIns(1,4,5)P3 suggesting that the domain may be a membrane interacting module. The main function of proteins containing this domain appears to be to act as accessory clathrin adaptors in endocytosis, Epsin is able to recruit and promote clathrin polymerisation on a lipid monolayer, but may have additional roles in signalling and actin regulation []. Epsin causes a strong degree of membrane curvature and tubulation, even fragmentation of membranes with a high PtdIns(4,5)P2 content. Epsin binding to membranes facilitates their deformation by insertion of the N-terminal helix into the outer leaflet of the bilayer, pushing the head groups apart. This would reduce the energy needed to curve the membrane into a vesicle, making it easier for the clathrin cage to fix and stabilise the curved membrane. This points to a pioneering role for epsin in vesicle budding as it provides both a driving force and a link between membrane invagination and clathrin polymerisation. ; PDB: 1H0A_A 1EYH_A 1EDU_A 2QY7_B 1XGW_A 2V8S_E 1VDY_A 2DCP_A 1INZ_A 3ONL_B ....

>KOG0251|consensus

Probab=97.46  E-value=0.0004  Score=62.85  Aligned_cols=74  Identities=23%  Similarity=0.318  Sum_probs=54.2

Q ss_pred             ccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHH--HHHhhhcccCCCccchhHHHHHHHHHHHHhhhcc
Q psy9626          22 RLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI--TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRR   95 (145)
Q Consensus        22 ~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i--~~l~r~w~~~~~gYG~lI~~Y~~lL~~Kl~FH~k   95 (145)
                      |+-=..|=+|++|+|+++|++|++|-|++-.+-.+....|  .+..+--+...-+|+..|+-|.+||-.|+.+=+.
T Consensus        68 Rl~~TrnW~VAlKsLIliH~ll~~G~~~f~~~l~~~~~~l~lS~F~d~s~~~~~d~safVR~Ya~YLderl~~~~~  143 (491)
T KOG0251|consen   68 RLNKTRNWTVALKALILIHRLLKEGDPSFEQELLSRNLILNLSDFRDKSSSLTWDMSAFVRTYALYLDERLECYRV  143 (491)
T ss_pred             HhCCCcceeehHHHHHHHHHHHhcCcHHHHHHHHhcccccchhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence            3334458999999999999999999999998877665111  2222222222345899999999999999988543

>cd03571 ENTH_epsin ENTH domain, Epsin family; The epsin (Eps15 interactor) N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis

Probab=95.65  E-value=0.042  Score=41.25  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=59.9

Q ss_pred             ecCCCchhhHHhhhccccc--CCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhHHHH
Q psy9626           7 TFHDKSSTIFWQCASRLPL--MENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLIYQY   82 (145)
Q Consensus         7 T~~~ksa~~Fw~~~~~~Pl--~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI~~Y   82 (145)
                      |++.......++.+.++=.  ..+--..+|+|.+++=+|+.|.+.|+.+...|...|+.|..+---.  +...|.-|+.=
T Consensus        29 t~~~~~~~~Im~~l~kRL~~~~k~WR~vyKaL~lleyLl~nGse~vv~~~r~~~~~i~~L~~F~~~d~~g~d~G~~VR~k  108 (123)
T cd03571          29 TYNYVEFQEIMSMLWKRLNDKGKNWRHVYKALTLLEYLLKNGSERVVDDARENLYIIRTLKDFQYIDENGKDQGINVREK  108 (123)
T ss_pred             hCCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHhCCHHHHHHHHHhHHHHHhhccceeeCCCCCchhHHHHHH
Confidence            4443333344444433322  3477889999999999999999999999999999999997654322  33478888877


Q ss_pred             HHHHHHHH
Q psy9626          83 TRLLLGKL   90 (145)
Q Consensus        83 ~~lL~~Kl   90 (145)
                      ++-+..-|
T Consensus       109 a~~i~~Ll  116 (123)
T cd03571         109 AKEILELL  116 (123)
T ss_pred             HHHHHHHh
Confidence            77666543

A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network, which suggests that E/ANTH domains are univ

>cd00197 VHS_ENTH_ANTH VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain

Probab=90.97  E-value=2.1  Score=30.56  Aligned_cols=79  Identities=10%  Similarity=-0.057  Sum_probs=58.8

Q ss_pred             CchhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhHHHHHHHHHH
Q psy9626          11 KSSTIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLIYQYTRLLLG   88 (145)
Q Consensus        11 ksa~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI~~Y~~lL~~   88 (145)
                      .++......+.++=-..|+.+..|+|.+++-+++.|.+.+..+..++ ..+.++-+.-...  .+.-|.-|+.+++.|..
T Consensus        33 ~~~~~~~~~l~kRl~~~~~~~~lkaL~lLe~lvkN~g~~f~~~i~~~-~~~~~l~~~~~~~~~~~~~~~~Vr~k~~~l~~  111 (115)
T cd00197          33 VGPKEAVDAIKKRINNKNPHVVLKALTLLEYCVKNCGERFHQEVASN-DFAVELLKFDKSKLLGDDVSTNVREKAIELVQ  111 (115)
T ss_pred             ccHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHccHHHHHHHHHh-HHHHHHHHhhccccccCCCChHHHHHHHHHHH
Confidence            34566667676655567999999999999999999999999986665 5666776651111  22348889999999887


Q ss_pred             HH
Q psy9626          89 KL   90 (145)
Q Consensus        89 Kl   90 (145)
                      ..
T Consensus       112 ~w  113 (115)
T cd00197         112 LW  113 (115)
T ss_pred             HH
Confidence            53

The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal Transducing Adaptor Molecule). It is located at the N-termini of proteins involved in intracellular membrane trafficking. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. VHS, ENTH and ANTH domains are structurally similar and are composed of a superhelix of eight alpha helices. ENTH adnd ANTH (E/ANTH) domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membra

>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain

Probab=87.55  E-value=3.5  Score=31.02  Aligned_cols=62  Identities=11%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             CCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC----CCccchhHHHHHHHHH
Q psy9626          26 MENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL----KDGYGKLIYQYTRLLL   87 (145)
Q Consensus        26 ~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~----~~gYG~lI~~Y~~lL~   87 (145)
                      .++|.|-.|+|-+|=.+++.|++.+..+.+++..-|+++...-+..    ++.-|+.|+.=++=|.
T Consensus        49 ~~~~hVK~K~Lrilk~l~~~G~~~f~~~~~~~~~~Ik~~~~f~g~~Dp~~Gd~~~~~VR~~A~El~  114 (122)
T cd03572          49 RSSPHVKLKVLKIIKHLCEKGNSDFKRELQRNSAQIRECANYKGPPDPLKGDSLNEKVREEAQELI  114 (122)
T ss_pred             CCCCcchHHHHHHHHHHHhhCCHHHHHHHHHhHHHHHHHHHcCCCCCcccCcchhHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999977655532    3456777776655444

The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	145
3zyl_A	271	Phosphatidylinositol-binding clathrin assembly PR;	4e-11
3zym_A	310	Phosphatidylinositol-binding clathrin assembly PR	2e-10
1hx8_A	299	Synapse-enriched clathrin adaptor protein LAP; all	4e-08

>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A* Length = 271

 Score = 58.3 bits (140), Expect = 4e-11
 Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 15/143 (10%)

Query: 4   ILGTFHDKSS-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQV-- 60
           I  T     +               + +V +K     H ++  G+   I+    +  +  
Sbjct: 53  IQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFN 112

Query: 61  ITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINN 120
           ++N               I +Y+R L  K   +R+                ++       
Sbjct: 113 LSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFT----------KVKRGADGV 162

Query: 121 YFQMSVEMFDYLDEILALQAAVF 143
              M+ E    L  +  +Q  + 
Sbjct: 163 MRTMNTE--KLLKTVPIIQNQMD 183

>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus} Length = 310

 Score = 56.0 bits (134), Expect = 2e-10
 Identities = 19/143 (13%), Positives = 39/143 (27%), Gaps = 15/143 (10%)

Query: 4   ILGTFHDKSS-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKE--SIKQAQV 60
           I  T     +               + +V +K     H ++  G+   I+   S      
Sbjct: 53  IQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFN 112

Query: 61  ITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSELDRIGENDINN 120
           ++N               I +Y+R L  K   +R+                ++       
Sbjct: 113 LSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFT----------KVKRGADGV 162

Query: 121 YFQMSVEMFDYLDEILALQAAVF 143
              M+ E    L  +  +Q  + 
Sbjct: 163 MRTMNTE--KLLKTVPIIQNQMD 183

>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3 Length = 299

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 18/154 (11%), Positives = 38/154 (24%), Gaps = 25/154 (16%)

Query: 4   ILGTFHDKSSTIFWQCA-SRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVI- 61
           +        S               N +V +K     H ++  G+   ++          
Sbjct: 48  VHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFN 107

Query: 62  ------------TNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRRNPGFPGNLILSQSE 109
                         +G     +       I +Y + L  K   +R          ++   
Sbjct: 108 LSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRA---------MAFDF 158

Query: 110 LDRIGENDINNYFQMSVEMFDYLDEILALQAAVF 143
                  +  +   M+ E    L  +  LQA + 
Sbjct: 159 CKVKRGKEEGSLRSMNAE--KLLKTLPVLQAQLD 190

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	145
1hx8_A	299	Synapse-enriched clathrin adaptor protein LAP; all	99.85
3zyl_A	271	Phosphatidylinositol-binding clathrin assembly PR;	99.85
3zym_A	310	Phosphatidylinositol-binding clathrin assembly PR	99.84
1inz_A	148	EPS15-interacting portein(epsin); alpha-helix, rik	97.36
1eyh_A	144	Epsin; superhelix of helices, cell cycle; 1.56A {R	97.17
3onk_A	150	Epsin-3, ENT3; helix, protein transport; 2.09A {Sa	95.97
1xgw_A	176	Epsin 4; ENTH, enthoprotin, clathrin-associated, e	95.72
1vdy_A	140	Hypothetical protein (RAFL09-17-B18); structural g	89.14
3bej_E	26	Nuclear receptor coactivator 1; FXR, BAR, NR1H4, b	82.63

>1hx8_A Synapse-enriched clathrin adaptor protein LAP; all alpha, alpha helices repeats, coiled-coil, endocytosis/exocytosis complex; 2.20A {Drosophila melanogaster} SCOP: a.7.8.2 a.118.9.3

Probab=99.85  E-value=5e-23  Score=171.34  Aligned_cols=128  Identities=14%  Similarity=0.087  Sum_probs=96.3

Q ss_pred             EEEeecCCCc--hhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhh----------ccc
Q psy9626           3 AILGTFHDKS--STIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM----------WFH   70 (145)
Q Consensus         3 ~Iv~T~~~ks--a~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~----------w~~   70 (145)
                      ||++||++++  +..||....| |..+|.+|+||+|+++|||||||||+++++..++. .+-+|+.+          |++
T Consensus        47 ii~~t~~~~~~~~~~~~~L~~R-~~~~~w~va~K~LivlH~llreG~~~~~~~l~~~~-~~l~l~~f~D~~~~~~~~~~~  124 (299)
T 1hx8_A           47 LVHCANEPNVSIPHLANLLIER-SQNANWVVVYKSLITTHHLMAYGNERFMQYLASSN-STFNLSSFLDKGTVQDGGMGV  124 (299)
T ss_dssp             HHHHHHCTTSCHHHHHHHHHHH-HTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHTT-CCCCCTTCCCCCC---CCSSC
T ss_pred             HHHHHcCCCCCHHHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHhcCCHHHHHHHHhCC-cccchhhhhcccccccccccc
Confidence            7789999999  5556665555 99999999999999999999999999999998754 34445433          655


Q ss_pred             CC--C--ccchhHHHHHHHHHHH-HhhhccCCCCCCCeeechhhhcccccCCCchhHHHHHHHhhhHHHHHHHHHhhhC
Q psy9626          71 LK--D--GYGKLIYQYTRLLLGK-LDFHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFG  144 (145)
Q Consensus        71 ~~--~--gYG~lI~~Y~~lL~~K-l~FH~khp~fpG~le~~e~~l~~~~~~D~n~~fq~~~dlmd~~D~i~~lq~~Vf~  144 (145)
                      .+  +  +||.+|+.|++||.+| +.||..+.+|.      .  +  .  .++++++....++..++|.+..||+.|++
T Consensus       125 ~~~~~~~d~s~~Ir~Ya~yL~~r~~~f~~~~~d~~------~--~--~--~~~~~~~~~~l~~~~lL~~l~~lQ~li~~  191 (299)
T 1hx8_A          125 PGGRMGYDMSPFIRRYAKYLNEKSLSYRAMAFDFC------K--V--K--RGKEEGSLRSMNAEKLLKTLPVLQAQLDA  191 (299)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSCGG------G--C---------CCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHHHHHHhCCCcc------c--c--c--cCccccchhhCCHHHHHHHHHHHHHHHHH
Confidence            42  2  4899999999999999 79999996552      1  1  1  13334444444556699999999999884

>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis, endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane, adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A 1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*

Probab=99.85  E-value=1.5e-22  Score=167.25  Aligned_cols=127  Identities=13%  Similarity=0.108  Sum_probs=103.4

Q ss_pred             EEEeecCCCch-hhHHhhh-cccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccCC-C--ccch
Q psy9626           3 AILGTFHDKSS-TIFWQCA-SRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLK-D--GYGK   77 (145)
Q Consensus         3 ~Iv~T~~~ksa-~~Fw~~~-~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~~-~--gYG~   77 (145)
                      ||++||+++++ .++|..+ .|++ .+|.+|+||+|+++||+||||||++++++.++.. +.+|+++|.+.+ +  +||+
T Consensus        52 il~~T~~~~~~~~~~~~~L~~Rl~-~~~w~v~~KaLivlH~llreG~~~~l~~~~~~~~-~~~Ls~f~d~~~~~~~~~s~  129 (271)
T 3zyl_A           52 LIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNLSNFLDKSGLQGYDMST  129 (271)
T ss_dssp             HHHHHHSTTSCHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC-CCCCTTCCCCSSHHHHHHHH
T ss_pred             HHHHHccCCCcHHHHHHHHHHHhC-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHhCCC-eechhccCCCCCCCcccccH
Confidence            77899998864 6777766 4777 8899999999999999999999999999988764 569999887642 3  4779


Q ss_pred             hHHHHHHHHHHHHh-hhccCCCCCCCeeechhhhcccccCCCchhHHHHHHHhhhHHHHHHHHHhhhC
Q psy9626          78 LIYQYTRLLLGKLD-FHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFG  144 (145)
Q Consensus        78 lI~~Y~~lL~~Kl~-FH~khp~fpG~le~~e~~l~~~~~~D~n~~fq~~~dlmd~~D~i~~lq~~Vf~  144 (145)
                      +|+.|++||.+|+. ||..++.|++.             .++++++.-..++..++|.+..||+.+++
T Consensus       130 ~Ir~Ya~yL~eRl~~f~~~~~d~~~~-------------k~~~~~~~r~~~~~~Ll~~l~~lQ~lld~  184 (271)
T 3zyl_A          130 FIRRYSRYLNEKAVSYRQVAFDFTKV-------------KRGADGVMRTMNTEKLLKTVPIIQNQMDA  184 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCTTTS-------------CCSTTSHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccc-------------CCCCCCccccCCHHHHHHHHHHHHHHHHH
Confidence            99999999999997 99999999752             12344555555667788888888888763

>3zym_A Phosphatidylinositol-binding clathrin assembly PR vesicle-associated membrane protein...; endocytosis, synaptobrevin, VAMP2, VAMP3, AP180; HET: PO4; 2.03A {Rattus norvegicus}

Probab=99.84  E-value=4e-22  Score=167.25  Aligned_cols=127  Identities=13%  Similarity=0.086  Sum_probs=101.4

Q ss_pred             EEEeecCCCch--hhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccCC---Cccch
Q psy9626           3 AILGTFHDKSS--TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHLK---DGYGK   77 (145)
Q Consensus         3 ~Iv~T~~~ksa--~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~~---~gYG~   77 (145)
                      ||.+||+++++  ..+|....|++ .+|.+|+||+|+++||+||||||++++++.++.. +.+|+++|.+.+   .+||+
T Consensus        52 il~~T~~~~~~~~~i~~~L~~Rl~-~~~w~vv~KaLivlH~llreG~~~~l~~~~~~~~-~~~Ls~f~d~~~~~g~~~~~  129 (310)
T 3zym_A           52 LIQCTNEMNVNIPQLADSLFERTT-NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNLSNFLDKSGLQGYDMST  129 (310)
T ss_dssp             HHHHHHCTTSCHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSC-CCCCTTCCCCSSHHHHHHHH
T ss_pred             HHHHHccCCCcHHHHHHHHHhhcC-CCchHHHHHHHHHHHHHHhcCCHHHHHHHHhCCC-eeecccccCCCCcCcccccH
Confidence            67899999874  45555556888 7899999999999999999999999999988775 459999997643   45889


Q ss_pred             hHHHHHHHHHHHHh-hhccCCCCCCCeeechhhhcccccCCCchhHHHHHHHhhhHHHHHHHHHhhhC
Q psy9626          78 LIYQYTRLLLGKLD-FHRRNPGFPGNLILSQSELDRIGENDINNYFQMSVEMFDYLDEILALQAAVFG  144 (145)
Q Consensus        78 lI~~Y~~lL~~Kl~-FH~khp~fpG~le~~e~~l~~~~~~D~n~~fq~~~dlmd~~D~i~~lq~~Vf~  144 (145)
                      +|+.|++||..|+. ||..++.|...             .++++++.-..++..+++.+..+|+.+++
T Consensus       130 ~Ir~Ya~yL~~Rl~~f~~~~~d~~~~-------------~~~~~~~~r~~~~~~Ll~~l~~lQ~lid~  184 (310)
T 3zym_A          130 FIRRYSRYLNEKAVSYRQVAFDFTKV-------------KRGADGVMRTMNTEKLLKTVPIIQNQMDA  184 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSCTTTS-------------CCSTTSHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcccc-------------cCCCCCccccCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999 99999998531             12334554555666788888888887753

>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1

Probab=97.36  E-value=0.00081  Score=50.87  Aligned_cols=85  Identities=9%  Similarity=0.079  Sum_probs=64.3

Q ss_pred             eecCCCchhhHHhhhcccccC--CCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhccc--CCCccchhHHH
Q psy9626           6 GTFHDKSSTIFWQCASRLPLM--ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFH--LKDGYGKLIYQ   81 (145)
Q Consensus         6 ~T~~~ksa~~Fw~~~~~~Pl~--~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~--~~~gYG~lI~~   81 (145)
                      .|++.......+..+.++=-.  .+--+.+|+|.+||=+|+.|.+.|+.++..|...|+.|..+---  .+...|.-|+.
T Consensus        50 ~T~~~~~~~eIm~~l~kRL~d~~k~WR~vyKaL~lleyLl~nGse~vv~~~r~~~~~I~~L~~F~y~d~~g~D~G~nVR~  129 (148)
T 1inz_A           50 LTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVRE  129 (148)
T ss_dssp             HHTSSHHHHHHHHHHHHGGGCCSSCTHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHCCCCCSSCCCCCHHHHH
T ss_pred             HhCCHhhHHHHHHHHHHHHccCCcchhHhhHHHHHHHHHHHhCCHHHHHHHHHhHHHHHhhcceeeeCCCCcCchHHHHH
Confidence            355554444455555444222  36789999999999999999999999999999999999985222  23347999999


Q ss_pred             HHHHHHHHH
Q psy9626          82 YTRLLLGKL   90 (145)
Q Consensus        82 Y~~lL~~Kl   90 (145)
                      +++.|++-|
T Consensus       130 kAk~l~~LL  138 (148)
T 1inz_A          130 KAKQLVALL  138 (148)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998765

>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A

Probab=97.17  E-value=0.00077  Score=50.73  Aligned_cols=84  Identities=10%  Similarity=0.097  Sum_probs=62.0

Q ss_pred             ecCCCchhhHHhhhcccccC--CCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhccc--CCCccchhHHHH
Q psy9626           7 TFHDKSSTIFWQCASRLPLM--ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFH--LKDGYGKLIYQY   82 (145)
Q Consensus         7 T~~~ksa~~Fw~~~~~~Pl~--~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~--~~~gYG~lI~~Y   82 (145)
                      |++.......+..+.++=-.  .+--+.+|+|.+||=+|+.|.+.|+.++..|...|+.|..+---  .+...|.-|+.+
T Consensus        33 T~~~~~~~~Im~~l~kRL~d~~k~Wr~vyKaL~lleyLl~nGse~vv~~~~~~~~~i~~L~~F~y~d~~g~D~G~~VR~k  112 (144)
T 1eyh_A           33 TYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNVREK  112 (144)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCCCBCTTSCBCHHHHHHH
T ss_pred             hCCHhhHHHHHHHHHHHHccCCcchHHHhHHHHHHHHHHHhCCHHHHHHHHHhhHHHhhhccceeeCCCccchHHHHHHH
Confidence            44443333344444333222  36779999999999999999999999999999999999986322  234479999999


Q ss_pred             HHHHHHHH
Q psy9626          83 TRLLLGKL   90 (145)
Q Consensus        83 ~~lL~~Kl   90 (145)
                      ++.|+.-|
T Consensus       113 ak~l~~Ll  120 (144)
T 1eyh_A          113 AKQLVALL  120 (144)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988754

>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A

Probab=95.97  E-value=0.013  Score=44.37  Aligned_cols=64  Identities=13%  Similarity=0.190  Sum_probs=54.2

Q ss_pred             CCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhHHHHHHHHHHHH
Q psy9626          27 ENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLIYQYTRLLLGKL   90 (145)
Q Consensus        27 ~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI~~Y~~lL~~Kl   90 (145)
                      .+--+.+|+|.+|+=+|+.|.+.|+.++..|...|+.|..+---.  +...|.-|+..++-|+.=|
T Consensus        62 k~WR~vyKaL~lLeyLl~nGse~vv~~~r~~~~~i~~L~~F~~~d~~G~D~G~~VR~kak~l~~LL  127 (150)
T 3onk_A           62 SEWRQIYKALQLLDYLIKHGSERFIDDTRNSINLIRILETFHYIDSQGRDQGINVRTRVKALIELL  127 (150)
T ss_dssp             TTHHHHHHHHHHHHHHHHHSCHHHHHHHHTTHHHHHGGGGCCCBCTTSCBCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccccCCCCCchHHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999998743322  3447999999999887654

>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E

Probab=95.72  E-value=0.034  Score=43.08  Aligned_cols=85  Identities=16%  Similarity=0.104  Sum_probs=64.6

Q ss_pred             eecCCCchhhHHhhhccccc---CCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC--CCccchhHH
Q psy9626           6 GTFHDKSSTIFWQCASRLPL---MENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL--KDGYGKLIY   80 (145)
Q Consensus         6 ~T~~~ksa~~Fw~~~~~~Pl---~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~--~~gYG~lI~   80 (145)
                      .|++.......+..+-++=+   ..+--+.+|+|.+|+=+|+.|.+.|+.++..|..-|++|..+---.  +...|.-|+
T Consensus        61 ~T~~~~~~~~Im~~L~kRl~~~~~k~WR~vyKaL~LLeYLl~nGse~vv~~~r~~i~~I~~L~~F~y~D~~G~D~G~~VR  140 (176)
T 1xgw_A           61 ATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGINIR  140 (176)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHSSCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCCCBCTTSCBCHHHHH
T ss_pred             HhcChhhHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhCCHHHHHHHHHhHHHHHhhccCeeECCCCCChHHHHH
Confidence            35555555555555533322   3578999999999999999999999999999999999998764322  344799999


Q ss_pred             HHHHHHHHHH
Q psy9626          81 QYTRLLLGKL   90 (145)
Q Consensus        81 ~Y~~lL~~Kl   90 (145)
                      ..++-|+.-|
T Consensus       141 ~kAk~i~~LL  150 (176)
T 1xgw_A          141 QKVKELVEFA  150 (176)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999887654

>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A

Probab=89.14  E-value=1  Score=33.55  Aligned_cols=75  Identities=12%  Similarity=0.045  Sum_probs=59.4

Q ss_pred             hHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhcccC----CCccchhHHHHHHHHHHH
Q psy9626          15 IFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFHL----KDGYGKLIYQYTRLLLGK   89 (145)
Q Consensus        15 ~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~~----~~gYG~lI~~Y~~lL~~K   89 (145)
                      ..+..+.++=-..++-+-+|+|-+|=-+++.|++.++.+..+|...|+.|..+-+..    ++.-|..++.-++=|..=
T Consensus        49 eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~~~~r~~~~~Ik~l~~F~g~~dp~~G~d~g~~VR~~AkEl~~l  127 (140)
T 1vdy_A           49 EFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHETISA  127 (140)
T ss_dssp             HHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHTTHHHHTTTTCCCCCCTTTSSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHHHHHHHhHHHHHHHHhcCCCCCcccccchhHHHHHHHHHHHHH
Confidence            344444444445677899999999999999999999999999999999998766653    355788899888877653

>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*

Probab=82.63  E-value=0.47  Score=25.81  Aligned_cols=12  Identities=50%  Similarity=1.151  Sum_probs=10.1

Q ss_pred             HHHHHhhhcCch
Q psy9626          38 VLHKILREGHPH   49 (145)
Q Consensus        38 ~lHKvLreGHp~   49 (145)
                      .+|++||+|.|+
T Consensus        14 ILHrLLQ~~sP~   25 (26)
T 3bej_E           14 ILHRLLQEGSPS   25 (26)
T ss_pred             HHHHHHHcCCCC
Confidence            579999999774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	145
d1hx8a2	140	a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Droso	7e-11
d1hf8a2	131	a.118.9.3 (A:19-149) Clathrin assembly lymphoid my	2e-10

>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 54.2 bits (130), Expect = 7e-11
 Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 14/106 (13%)

Query: 4   ILGTFHDKSSTIFW-QCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESI------- 55
           +        S               N +V +K     H ++  G+   ++          
Sbjct: 27  VHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFN 86

Query: 56  ------KQAQVITNVGKMWFHLKDGYGKLIYQYTRLLLGKLDFHRR 95
                 K       +G     +       I +Y + L  K   +R 
Sbjct: 87  LSSFLDKGTVQDGGMGVPGGRMGYDMSPFIRRYAKYLNEKSLSYRA 132

>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.6 bits (126), Expect = 2e-10
 Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 3/95 (3%)

Query: 4   ILGTFHDKSS-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVIT 62
           I  T     +               + +V +K     H ++  G+   I+    +  +  
Sbjct: 28  IQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFN 87

Query: 63  NVGKMWFHLKDG--YGKLIYQYTRLLLGKLDFHRR 95
               +      G      I +Y+R L  K   +R+
Sbjct: 88  LSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQ 122

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	145
d1hf8a2	131	Clathrin assembly lymphoid myeloid leukaemia prote	99.57
d1hx8a2	140	AP180 (Lap) {Fruit fly (Drosophila melanogaster) [	99.55
d1eyha_	144	Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}	98.74

>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=1.2e-16  Score=116.63  Aligned_cols=91  Identities=14%  Similarity=0.066  Sum_probs=77.7

Q ss_pred             EEEeecCCCc-hhhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhhccc-C--CCccchh
Q psy9626           3 AILGTFHDKS-STIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKMWFH-L--KDGYGKL   78 (145)
Q Consensus         3 ~Iv~T~~~ks-a~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~w~~-~--~~gYG~l   78 (145)
                      |+.+||++++ +..+|..+.+++..+|++|+||+|+++|+++|+|+|.++.+..++..+|+ +.+.... .  ..+||.+
T Consensus        27 i~~~t~~~~~~~~~~~~~L~~Rl~~~~w~v~~K~L~llh~ll~~G~~~~~~~~~~~~~~l~-l~~~~~~~~~~~~~~~~~  105 (131)
T d1hf8a2          27 LIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFN-LSNFLDKSGLQGYDMSTF  105 (131)
T ss_dssp             HHHHHTCTTSCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHSSCCCC-CTTCCCCSSHHHHHHHHH
T ss_pred             HHHHHhCCcccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHhCcchhh-hhhccccCCCCcCcccHH
Confidence            5668999886 58899999999999999999999999999999999999999999988885 3333322 2  3568999


Q ss_pred             HHHHHHHHHHHHhhhc
Q psy9626          79 IYQYTRLLLGKLDFHR   94 (145)
Q Consensus        79 I~~Y~~lL~~Kl~FH~   94 (145)
                      |+.|++||.+|+.+.+
T Consensus       106 Ir~Ya~yL~er~~~~r  121 (131)
T d1hf8a2         106 IRRYSRYLNEKAVSYR  121 (131)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

>d1hx8a2 a.118.9.3 (A:22-161) AP180 (Lap) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: Phosphoinositide-binding clathrin adaptor, N-terminal domain
domain: AP180 (Lap)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.55  E-value=1e-16  Score=118.42  Aligned_cols=92  Identities=12%  Similarity=0.060  Sum_probs=75.5

Q ss_pred             EEEeecCCCch-hhHHhhhcccccCCCchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhh--------------
Q psy9626           3 AILGTFHDKSS-TIFWQCASRLPLMENVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM--------------   67 (145)
Q Consensus         3 ~Iv~T~~~ksa-~~Fw~~~~~~Pl~~~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~--------------   67 (145)
                      ||.+||+++++ ..++..+.+++..+|.+++||+|+++|++||+|+|.++.+..+++.++. |.++              
T Consensus        26 i~~~t~~~~~~~~~i~~~L~~Rl~~~~w~v~~K~L~llh~ll~~G~~~~~~~~~~~~~~~~-l~~f~d~~~~~~~~~~~~  104 (140)
T d1hx8a2          26 LVHCANEPNVSIPHLANLLIERSQNANWVVVYKSLITTHHLMAYGNERFMQYLASSNSTFN-LSSFLDKGTVQDGGMGVP  104 (140)
T ss_dssp             HHHHHHCTTSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCCC-CTTCCCCCC---CCSSCC
T ss_pred             HHHHHcCCcccHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCccc-cccccccccccccccccc
Confidence            67799999875 5567888888888899999999999999999999999999999888764 4432              


Q ss_pred             cccCCCccchhHHHHHHHHHHHHhhhcc
Q psy9626          68 WFHLKDGYGKLIYQYTRLLLGKLDFHRR   95 (145)
Q Consensus        68 w~~~~~gYG~lI~~Y~~lL~~Kl~FH~k   95 (145)
                      +.....+||.+|+.|++||..|+...+.
T Consensus       105 ~~~~~~~~~~~Ir~Ya~yL~eRl~~~R~  132 (140)
T d1hx8a2         105 GGRMGYDMSPFIRRYAKYLNEKSLSYRA  132 (140)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            1111235899999999999999988754

>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ENTH/VHS domain
family: ENTH domain
domain: Epsin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.74  E-value=2.9e-09  Score=77.95  Aligned_cols=88  Identities=9%  Similarity=0.076  Sum_probs=73.2

Q ss_pred             EEeecCCCchhhHHhhhcccccCC--CchhHHHHHHHHHHHhhhcCchhHHHHHHhHHHHHHHhhh-cccC-CCccchhH
Q psy9626           4 ILGTFHDKSSTIFWQCASRLPLME--NVIVAWKFCHVLHKILREGHPHVIKESIKQAQVITNVGKM-WFHL-KDGYGKLI   79 (145)
Q Consensus         4 Iv~T~~~ksa~~Fw~~~~~~Pl~~--~~v~~wK~~~~lHKvLreGHp~vl~ds~r~~~~i~~l~r~-w~~~-~~gYG~lI   79 (145)
                      +-.|++..+...++..+.++...+  +-++++|+|+++|.+|++|+|.++.+..++...|+.+..+ +... +..+|..|
T Consensus        30 ~~~t~~~~~~~~i~~~L~kRl~~~~k~Wrvv~K~L~ll~~Ll~~G~~~~v~~~~~~~~~i~~l~~f~~~d~~g~d~g~~V  109 (144)
T d1eyha_          30 ADLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAMTLMEYLIKTGSERVSQQCKENMYAVQTLKDFQYVDRDGKDQGVNV  109 (144)
T ss_dssp             HHHTTSHHHHHHHHHHHHHHHSCCGGGHHHHHHHHHHHHHHHHHSCHHHHHHHHHTHHHHHGGGGCCCBCTTSCBCHHHH
T ss_pred             HHHhcChhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHcCCHHHHHHHHHhHHHHHhhhcCcccCccccchhHHH
Confidence            445777778888898887777654  4589999999999999999999999999999999999875 3322 44589999


Q ss_pred             HHHHHHHHHHHh
Q psy9626          80 YQYTRLLLGKLD   91 (145)
Q Consensus        80 ~~Y~~lL~~Kl~   91 (145)
                      +.|++.|..-|.
T Consensus       110 R~kA~~l~~Ll~  121 (144)
T d1eyha_         110 REKAKQLVALLR  121 (144)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999987653