Psyllid ID: psy9785

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60---
Protein Sequence
MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHccEEEccccEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHccHHccccHHccHHHHHccEEEEcccEEEHHHcccccccccccHHcc
Coil and Loop (DISEMBL)
maeeensneensandmntkfglkirgrkgalkkknvynvkdhkfiprffkqptfcshckdfiw
Flexible Loop (DISEMBL)
maeeensneensandmntkfglkirgrkgalkkknvynvkdhkfiprffkqptfcSHCKDFIW
Low Complexity Region (SEG)
MaeeensneensanDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Disordered region (IsUnstruct)
********************GLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFI*
Disordered Region (DISOPRED)
******************************LKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Disordered Region (DISEMBL)
************ANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Disordered Region (DISPRO)
***********************IRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	63	2.2.26 [Sep-21-2011]
P05696	672	Protein kinase C alpha ty	no	N/A	0.920	0.086	0.571	6e-15
P20444	672	Protein kinase C alpha ty	yes	N/A	0.920	0.086	0.571	7e-15
P10102	672	Protein kinase C alpha ty	yes	N/A	0.920	0.086	0.571	1e-14
P17252	672	Protein kinase C alpha ty	yes	N/A	0.920	0.086	0.571	1e-14
Q25378	658	Protein kinase C OS=Lytec	N/A	N/A	0.746	0.071	0.680	3e-14
P05130	679	Protein kinase C, brain i	yes	N/A	0.650	0.060	0.853	1e-13
Q7SY24	670	Protein kinase C beta typ	no	N/A	0.873	0.082	0.584	2e-13
P04409	672	Protein kinase C alpha ty	yes	N/A	0.920	0.086	0.539	4e-13
Q16974	649	Calcium-dependent protein	N/A	N/A	0.603	0.058	0.763	1e-12
Q7LZQ8	671	Protein kinase C beta typ	N/A	N/A	0.841	0.078	0.568	1e-12

>sp|P05696|KPCA_RAT Protein kinase C alpha type OS=Rattus norvegicus GN=Prkca PE=1 SV=3

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 5/63 (7%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+   +N+  ++ D+  +F      RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC D
Sbjct: 1  MADVYPANDSTASQDVANRFA-----RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD 55

Query: 61 FIW 63
          FIW
Sbjct: 56 FIW 58

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 3

>sp|P20444|KPCA_MOUSE Protein kinase C alpha type OS=Mus musculus GN=Prkca PE=1 SV=3

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 5/63 (7%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+   +N+  ++ D+  +F      RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC D
Sbjct: 1  MADVYPANDSTASQDVANRFA-----RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD 55

Query: 61 FIW 63
          FIW
Sbjct: 56 FIW 58

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P10102|KPCA_RABIT Protein kinase C alpha type OS=Oryctolagus cuniculus GN=PRKCA PE=2 SV=3

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 5/63 (7%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+   +N+  ++ D+  +F      RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC D
Sbjct: 1  MADVFPANDSTASQDVANRFA-----RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD 55

Query: 61 FIW 63
          FIW
Sbjct: 56 FIW 58

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P17252|KPCA_HUMAN Protein kinase C alpha type OS=Homo sapiens GN=PRKCA PE=1 SV=4

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 5/63 (7%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+    N+  ++ D+  +F      RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC D
Sbjct: 1  MADVFPGNDSTASQDVANRFA-----RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTD 55

Query: 61 FIW 63
          FIW
Sbjct: 56 FIW 58

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, tumorigenesis, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation in glioma cells. In intestinal cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Exhibits anti-apoptotic function in glioma cells and protects them from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, and in leukemia cells mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Is highly expressed in a number of cancer cells where it can act as a tumor promoter and is implicated in malignant phenotypes of several tumors such as gliomas and breast cancers. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q25378|KPC1_LYTPI Protein kinase C OS=Lytechinus pictus GN=PKC1 PE=2 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 40/47 (85%)

Query: 17 NTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          N+   +K   R+GAL++KNV+ +K+HKFIPRFFKQPTFCSHCKDFIW
Sbjct: 3  NSTLEMKGFARRGALRQKNVHEIKNHKFIPRFFKQPTFCSHCKDFIW 49

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Lytechinus pictus (taxid: 7653)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P05130|KPC1_DROME Protein kinase C, brain isozyme OS=Drosophila melanogaster GN=Pkc53E PE=2 SV=2

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/41 (85%), Positives = 37/41 (90%)

Query: 22 LKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFI 62
          +K R RKGALKKKNV+NVKDH FI RFFKQPTFCSHCKDFI
Sbjct: 26 MKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFI 66

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q7SY24|KPCB_DANRE Protein kinase C beta type OS=Danio rerio GN=prkcbb PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 10/65 (15%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRG--RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHC 58
          MAE  NS+ E  +  M        RG  R+GAL++KNV+ VK+HKFI RFFKQPTFCSHC
Sbjct: 1  MAEPANSDGEERSAPM--------RGFARQGALRQKNVHEVKNHKFIARFFKQPTFCSHC 52

Query: 59 KDFIW 63
           DFIW
Sbjct: 53 TDFIW 57

Calcium-activated and phospholipid-dependent serine/threonine-protein kinase involved in various processes such as regulation of the B-cell receptor (BCR) signalosome, apoptosis and transcription regulation. Plays a key role in B-cell activation and function by regulating BCR-induced NF-kappa-B activation and B-cell suvival. Required for recruitment and activation of the IKK kinase to lipid rafts and mediates phosphorylation of card11/carma1, leading to activate the NF-kappa-B signaling. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates isoform p66Shc of shc1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (andr)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P04409|KPCA_BOVIN Protein kinase C alpha type OS=Bos taurus GN=PRKCA PE=1 SV=3

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 5/63 (7%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+   + E  +  D+  +F      RKGAL++KNV+ VK+H+FI RFFKQPTFCSHC D
Sbjct: 1  MADVFPAAEPAAPQDVANRFA-----RKGALRQKNVHEVKNHRFIARFFKQPTFCSHCTD 55

Query: 61 FIW 63
          FIW
Sbjct: 56 FIW 58

Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q16974|KPC1_APLCA Calcium-dependent protein kinase C OS=Aplysia californica GN=PRKC1 PE=1 SV=2

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 35/38 (92%)

Query: 26 GRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
           R+GAL++KNV+ VK+HKF+ RFFKQPTFCSHCKDFIW
Sbjct: 6  ARRGALRQKNVHEVKNHKFLARFFKQPTFCSHCKDFIW 43

PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.

Aplysia californica (taxid: 6500)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q7LZQ8|KPCB_XENLA Protein kinase C beta type OS=Xenopus laevis GN=prkcb PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 5/58 (8%)

Query: 6  NSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          +S      +D  T+F      RKGAL++KNV+ VK+HKF  RFFKQPTFCSHC DFIW
Sbjct: 3  DSEACEPGDDTTTRFA-----RKGALRQKNVHEVKEHKFTARFFKQPTFCSHCTDFIW 55

Calcium-activated and phospholipid-dependent serine/threonine-protein kinase involved in various processes such as regulation of the B-cell receptor (BCR) signalosome, apoptosis and transcription regulation. Plays a key role in B-cell activation and function by regulating BCR-induced NF-kappa-B activation and B-cell suvival. Required for recruitment and activation of the IKK kinase to lipid rafts and mediates phosphorylation of card11/carma1, leading to activate the NF-kappa-B signaling. Involved in apoptosis following oxidative damage: in case of oxidative conditions, specifically phosphorylates isoform p66Shc of shc1, leading to mitochondrial accumulation of p66Shc, where p66Shc acts as a reactive oxygen species producer. Acts as a coactivator of androgen receptor (andr)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag for epigenetic transcriptional activation.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	63
328709350	668	PREDICTED: protein kinase C, brain isozy	0.984	0.092	0.825	4e-23
270003746	666	hypothetical protein TcasGA2_TC003019 [T	0.920	0.087	0.8	2e-21
242021986	63	conserved hypothetical protein [Pediculu	1.0	1.0	0.746	3e-21
321461260	689	hypothetical protein DAPPUDRAFT_326383 [	0.920	0.084	0.775	6e-20
157114766	61	hypothetical protein AaeL_AAEL001120 [Ae	0.968	1.0	0.761	1e-19
156549330	671	PREDICTED: protein kinase C, brain isozy	1.0	0.093	0.692	1e-18
345487208	671	PREDICTED: protein kinase C, brain isozy	1.0	0.093	0.692	2e-18
167599380	669	protein kinase C1 [Choristoneura fumifer	0.984	0.092	0.714	2e-18
315319167	672	protein kinase C1 [Plutella xylostella]	0.984	0.092	0.698	3e-18
170038577	68	conserved hypothetical protein [Culex qu	0.968	0.897	0.730	5e-18

>gi|328709350|ref|XP_001945397.2| PREDICTED: protein kinase C, brain isozyme-like [Acyrthosiphon pisum]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 57/63 (90%), Gaps = 1/63 (1%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          M ++  S E+N A DMNTKFGL++RGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD
Sbjct: 1  MTDDYGSMEDN-AGDMNTKFGLRLRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 59

Query: 61 FIW 63
          FIW
Sbjct: 60 FIW 62

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270003746|gb|EFA00194.1| hypothetical protein TcasGA2_TC003019 [Tribolium castaneum]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/60 (80%), Positives = 55/60 (91%), Gaps = 2/60 (3%)

Query: 4  EENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          EE+ NEE S  D+NTKFGL++RGRKGALKKKNVYN+K H+F+PRFFKQPTFCSHCKDFIW
Sbjct: 3  EEDLNEEGS--DLNTKFGLRLRGRKGALKKKNVYNIKGHRFMPRFFKQPTFCSHCKDFIW 60

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242021986|ref|XP_002431423.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516704|gb|EEB18685.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 55/63 (87%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          M ++E +++     D+NTKF L++RGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD
Sbjct: 1  MIDDEANDDGPFPGDLNTKFALRLRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60

Query: 61 FIW 63
          FIW
Sbjct: 61 FIW 63

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321461260|gb|EFX72294.1| hypothetical protein DAPPUDRAFT_326383 [Daphnia pulex]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 49/58 (84%)

Query: 6  NSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          +S E     D+NT FG+K RGRKGALKKKN+Y VKDHKFIPRFFKQPTFCSHCKDFIW
Sbjct: 20 DSTEGPGTGDLNTVFGMKQRGRKGALKKKNIYIVKDHKFIPRFFKQPTFCSHCKDFIW 77

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157114766|ref|XP_001652411.1| hypothetical protein AaeL_AAEL001120 [Aedes aegypti] gi|108883564|gb|EAT47789.1| AAEL001120-PA [Aedes aegypti]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 54/63 (85%), Gaps = 2/63 (3%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MAEEEN+ +E   N+   KF ++ RGRKGALKKKNVYNVKDH+FIPRFFKQPTFCSHCKD
Sbjct: 1  MAEEENTLDEMPENE--NKFAMRNRGRKGALKKKNVYNVKDHRFIPRFFKQPTFCSHCKD 58

Query: 61 FIW 63
          FIW
Sbjct: 59 FIW 61

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156549330|ref|XP_001601074.1| PREDICTED: protein kinase C, brain isozyme-like isoform 1 [Nasonia vitripennis]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 2/65 (3%)

Query: 1  MAEEENSNEENS--ANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHC 58
          MA+ E +N+E+S    D  T F  K+RGRKGALKKKNVY VK+HKF+PRFF+QPTFCSHC
Sbjct: 1  MADNEENNQEDSLGPTDATTAFAKKLRGRKGALKKKNVYVVKNHKFMPRFFRQPTFCSHC 60

Query: 59 KDFIW 63
          KDFIW
Sbjct: 61 KDFIW 65

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487208|ref|XP_003425649.1| PREDICTED: protein kinase C, brain isozyme-like isoform 2 [Nasonia vitripennis]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 53/65 (81%), Gaps = 2/65 (3%)

Query: 1  MAEEENSNEENS--ANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHC 58
          MA+ E +N+E+S    D  T F  K+RGRKGALKKKNVY VK+HKF+PRFF+QPTFCSHC
Sbjct: 1  MADNEENNQEDSLGPTDATTAFAKKLRGRKGALKKKNVYVVKNHKFMPRFFRQPTFCSHC 60

Query: 59 KDFIW 63
          KDFIW
Sbjct: 61 KDFIW 65

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|167599380|gb|ABZ88709.1| protein kinase C1 [Choristoneura fumiferana]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 1/63 (1%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+EEN N ++   D+      K+RGRKGALKKKNVY VKDHKF+PRFFKQPTFCSHCKD
Sbjct: 1  MADEEN-NCDDGGGDLKLGQAFKLRGRKGALKKKNVYFVKDHKFMPRFFKQPTFCSHCKD 59

Query: 61 FIW 63
          FIW
Sbjct: 60 FIW 62

Source: Choristoneura fumiferana

Species: Choristoneura fumiferana

Genus: Choristoneura

Family: Tortricidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|315319167|gb|ADU04569.1| protein kinase C1 [Plutella xylostella]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+EEN N ++   D+      ++RGRKGALKKKNVY VKDHKF+PRFFKQPTFCSHCKD
Sbjct: 1  MADEEN-NCDDGGGDLKVGQAFRLRGRKGALKKKNVYLVKDHKFMPRFFKQPTFCSHCKD 59

Query: 61 FIW 63
          FIW
Sbjct: 60 FIW 62

Source: Plutella xylostella

Species: Plutella xylostella

Genus: Plutella

Family: Plutellidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038577|ref|XP_001847125.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167882324|gb|EDS45707.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 2/63 (3%)

Query: 1  MAEEENSNEENSANDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKD 60
          MA+E+N  +E    D   KF ++ RGRKGALKKKNVYNVKDH FIPRFFKQPTFCSHCKD
Sbjct: 1  MADEDNVMDEMPECD--NKFAMRNRGRKGALKKKNVYNVKDHHFIPRFFKQPTFCSHCKD 58

Query: 61 FIW 63
          FIW
Sbjct: 59 FIW 61

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	63
UNIPROTKB|J3KN97	150	PRKCA "Protein kinase C alpha	0.587	0.246	0.837	3.8e-14
UNIPROTKB|J3KRN5	308	PRKCA "Protein kinase C alpha	0.587	0.120	0.837	7e-14
FB|FBgn0003091	679	Pkc53E "Protein C kinase 53E"	0.650	0.060	0.853	8.8e-14
ZFIN|ZDB-GENE-040426-1354	668	prkcba "protein kinase C, beta	0.777	0.073	0.673	2.9e-13
UNIPROTKB|P17252	672	PRKCA "Protein kinase C alpha	0.587	0.055	0.837	4.9e-13
UNIPROTKB|P10102	672	PRKCA "Protein kinase C alpha	0.587	0.055	0.837	4.9e-13
MGI|MGI:97595	672	Prkca "protein kinase C, alpha	0.587	0.055	0.837	4.9e-13
RGD|3395	672	Prkca "protein kinase C, alpha	0.587	0.055	0.837	4.9e-13
UNIPROTKB|P05696	672	Prkca "Protein kinase C alpha	0.587	0.055	0.837	4.9e-13
WB|WBGene00004033	725	pkc-2 [Caenorhabditis elegans	0.761	0.066	0.596	1.1e-12

UNIPROTKB|J3KN97 PRKCA "Protein kinase C alpha type" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    20 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 56

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J3KRN5 PRKCA "Protein kinase C alpha type" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 7.0e-14, P = 7.0e-14
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0003091 Pkc53E "Protein C kinase 53E" [Drosophila melanogaster (taxid:7227)]

 Score = 189 (71.6 bits), Expect = 8.8e-14, P = 8.8e-14
 Identities = 35/41 (85%), Positives = 37/41 (90%)

Query:    22 LKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFI 62
             +K R RKGALKKKNV+NVKDH FI RFFKQPTFCSHCKDFI
Sbjct:    26 MKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFI 66

GO:0004697 "protein kinase C activity" evidence=IEA;ISS;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS;IDA

GO:0006468 "protein phosphorylation" evidence=NAS;IDA

GO:0019992 "diacylglycerol binding" evidence=ISS;NAS

GO:0004698 "calcium-dependent protein kinase C activity" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035206 "regulation of hemocyte proliferation" evidence=IMP

ZFIN|ZDB-GENE-040426-1354 prkcba "protein kinase C, beta a" [Danio rerio (taxid:7955)]

 Score = 184 (69.8 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 33/49 (67%), Positives = 39/49 (79%)

Query:    15 DMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             D + K G +   R+GAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:     6 DSDGKEGARGFARQGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 54

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P17252 PRKCA "Protein kinase C alpha type" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0000188 "inactivation of MAPK activity" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0001934 "positive regulation of protein phosphorylation" evidence=IEA

GO:0002026 "regulation of the force of heart contraction" evidence=IEA

GO:0002062 "chondrocyte differentiation" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030593 "neutrophil chemotaxis" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0046325 "negative regulation of glucose import" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0050729 "positive regulation of inflammatory response" evidence=IEA

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0050930 "induction of positive chemotaxis" evidence=IEA

GO:0071322 "cellular response to carbohydrate stimulus" evidence=IEA

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=IDA

GO:0035408 "histone H3-T6 phosphorylation" evidence=IDA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=IMP

GO:0010595 "positive regulation of endothelial cell migration" evidence=IMP

GO:0045785 "positive regulation of cell adhesion" evidence=IMP

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IMP

GO:0045766 "positive regulation of angiogenesis" evidence=IMP

GO:0090330 "regulation of platelet aggregation" evidence=IDA

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISS

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISS

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=IMP

GO:0097190 "apoptotic signaling pathway" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=TAS

GO:0004697 "protein kinase C activity" evidence=ISS;TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007202 "activation of phospholipase C activity" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0050796 "regulation of insulin secretion" evidence=TAS

GO:0019899 "enzyme binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007190 "activation of adenylate cyclase activity" evidence=ISS

GO:0007194 "negative regulation of adenylate cyclase activity" evidence=ISS

GO:0002159 "desmosome assembly" evidence=IMP

GO:0070555 "response to interleukin-1" evidence=IMP

UNIPROTKB|P10102 PRKCA "Protein kinase C alpha type" [Oryctolagus cuniculus (taxid:9986)]

 Score = 182 (69.1 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISS

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISS

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISS

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISS

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISS

GO:0045766 "positive regulation of angiogenesis" evidence=ISS

GO:0045785 "positive regulation of cell adhesion" evidence=ISS

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISS

GO:0048471 "perinuclear region of cytoplasm" evidence=ISS

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISS

GO:0090330 "regulation of platelet aggregation" evidence=ISS

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISS

MGI|MGI:97595 Prkca "protein kinase C, alpha" [Mus musculus (taxid:10090)]

 Score = 182 (69.1 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000188 "inactivation of MAPK activity" evidence=IMP

GO:0000302 "response to reactive oxygen species" evidence=ISO

GO:0001525 "angiogenesis" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IDA

GO:0001933 "negative regulation of protein phosphorylation" evidence=IMP

GO:0001934 "positive regulation of protein phosphorylation" evidence=IMP

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISO

GO:0002026 "regulation of the force of heart contraction" evidence=IMP

GO:0002062 "chondrocyte differentiation" evidence=IDA

GO:0002159 "desmosome assembly" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004697 "protein kinase C activity" evidence=ISO;IDA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006469 "negative regulation of protein kinase activity" evidence=IMP

GO:0006874 "cellular calcium ion homeostasis" evidence=IMP

GO:0006915 "apoptotic process" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IMP

GO:0007155 "cell adhesion" evidence=IEA

GO:0007611 "learning or memory" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IGI

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISO

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017148 "negative regulation of translation" evidence=ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0021955 "central nervous system neuron axonogenesis" evidence=ISO

GO:0030425 "dendrite" evidence=IDA

GO:0030593 "neutrophil chemotaxis" evidence=IMP

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO

GO:0032355 "response to estradiol stimulus" evidence=ISO

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISO

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=ISO

GO:0035408 "histone H3-T6 phosphorylation" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043234 "protein complex" evidence=ISO

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=ISO

GO:0045121 "membrane raft" evidence=ISO

GO:0045471 "response to ethanol" evidence=ISO

GO:0045651 "positive regulation of macrophage differentiation" evidence=IMP

GO:0045766 "positive regulation of angiogenesis" evidence=ISO

GO:0045785 "positive regulation of cell adhesion" evidence=ISO

GO:0045822 "negative regulation of heart contraction" evidence=ISO

GO:0045921 "positive regulation of exocytosis" evidence=ISO

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISO

GO:0046325 "negative regulation of glucose import" evidence=IMP

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048259 "regulation of receptor-mediated endocytosis" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=ISO

GO:0050729 "positive regulation of inflammatory response" evidence=IMP

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=IMP

GO:0050930 "induction of positive chemotaxis" evidence=IMP

GO:0051965 "positive regulation of synapse assembly" evidence=ISO

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=ISO

GO:0070555 "response to interleukin-1" evidence=ISO

GO:0071322 "cellular response to carbohydrate stimulus" evidence=IDA

GO:0090330 "regulation of platelet aggregation" evidence=ISO;IMP

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IMP

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=IMP

RGD|3395 Prkca "protein kinase C, alpha" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0000188 "inactivation of MAPK activity" evidence=ISO

GO:0000302 "response to reactive oxygen species" evidence=IMP

GO:0001525 "angiogenesis" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=ISO

GO:0001933 "negative regulation of protein phosphorylation" evidence=ISO

GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=ISO;ISS

GO:0002026 "regulation of the force of heart contraction" evidence=ISO

GO:0002062 "chondrocyte differentiation" evidence=ISO

GO:0002159 "desmosome assembly" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0004697 "protein kinase C activity" evidence=ISO;IDA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0007611 "learning or memory" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0009612 "response to mechanical stimulus" evidence=IEP

GO:0009636 "response to toxic substance" evidence=IEP

GO:0010595 "positive regulation of endothelial cell migration" evidence=ISO;ISS

GO:0010613 "positive regulation of cardiac muscle hypertrophy" evidence=IDA

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0017148 "negative regulation of translation" evidence=IMP

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0019899 "enzyme binding" evidence=ISO

GO:0021955 "central nervous system neuron axonogenesis" evidence=IMP

GO:0030425 "dendrite" evidence=ISO

GO:0030593 "neutrophil chemotaxis" evidence=ISO

GO:0031666 "positive regulation of lipopolysaccharide-mediated signaling pathway" evidence=ISO;ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IMP

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=ISO;ISS

GO:0035403 "histone kinase activity (H3-T6 specific)" evidence=ISO

GO:0035408 "histone H3-T6 phosphorylation" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA;IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043234 "protein complex" evidence=IDA

GO:0043434 "response to peptide hormone stimulus" evidence=IEP

GO:0043536 "positive regulation of blood vessel endothelial cell migration" evidence=ISO

GO:0045121 "membrane raft" evidence=IDA

GO:0045184 "establishment of protein localization" evidence=TAS

GO:0045471 "response to ethanol" evidence=IMP

GO:0045651 "positive regulation of macrophage differentiation" evidence=ISO;ISS

GO:0045766 "positive regulation of angiogenesis" evidence=ISO;ISS

GO:0045785 "positive regulation of cell adhesion" evidence=ISO;ISS

GO:0045822 "negative regulation of heart contraction" evidence=IMP

GO:0045921 "positive regulation of exocytosis" evidence=IMP

GO:0045931 "positive regulation of mitotic cell cycle" evidence=ISO;ISS

GO:0046325 "negative regulation of glucose import" evidence=ISO

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=ISO

GO:0046677 "response to antibiotic" evidence=IEP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0048259 "regulation of receptor-mediated endocytosis" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0048661 "positive regulation of smooth muscle cell proliferation" evidence=IMP

GO:0050729 "positive regulation of inflammatory response" evidence=ISO

GO:0050730 "regulation of peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0050930 "induction of positive chemotaxis" evidence=ISO

GO:0051412 "response to corticosterone stimulus" evidence=IEP

GO:0051965 "positive regulation of synapse assembly" evidence=IMP

GO:0070374 "positive regulation of ERK1 and ERK2 cascade" evidence=IMP

GO:0070555 "response to interleukin-1" evidence=ISO

GO:0071322 "cellular response to carbohydrate stimulus" evidence=ISO

GO:0090330 "regulation of platelet aggregation" evidence=ISO;ISS

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO

GO:2000707 "positive regulation of dense core granule biogenesis" evidence=ISO;ISS

UNIPROTKB|P05696 Prkca "Protein kinase C alpha type" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query:    27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             RKGAL++KNV+ VKDHKFI RFFKQPTFCSHC DFIW
Sbjct:    22 RKGALRQKNVHEVKDHKFIARFFKQPTFCSHCTDFIW 58

GO:0005524 "ATP binding" evidence=IEA

WB|WBGene00004033 pkc-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 31/52 (59%), Positives = 40/52 (76%)

Query:    16 MNTKFGLKIRG----RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
             + T+   +I G    R+GAL++KNV+ +K HKFI RFFKQPTFCSHCKDF+W
Sbjct:    54 LGTQLSQRIEGKAFVRRGALRQKNVHEIKSHKFIARFFKQPTFCSHCKDFLW 105

GO:0004697 "protein kinase C activity" evidence=IEA;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P20444	KPCA_MOUSE	2, ., 7, ., 1, 1, ., 1, 3	0.5714	0.9206	0.0863	yes	N/A
P04409	KPCA_BOVIN	2, ., 7, ., 1, 1, ., 1, 3	0.5396	0.9206	0.0863	yes	N/A
P10102	KPCA_RABIT	2, ., 7, ., 1, 1, ., 1, 3	0.5714	0.9206	0.0863	yes	N/A
P17252	KPCA_HUMAN	2, ., 7, ., 1, 1, ., 1, 3	0.5714	0.9206	0.0863	yes	N/A
P05130	KPC1_DROME	2, ., 7, ., 1, 1, ., 1, 3	0.8536	0.6507	0.0603	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	63
pfam00130	53	pfam00130, C1_1, Phorbol esters/diacylglycerol bin	8e-07
cd00029	50	cd00029, C1, Protein kinase C conserved region 1 (	4e-05
smart00109	50	smart00109, C1, Protein kinase C conserved region	2e-04

>gnl|CDD|215738 pfam00130, C1_1, Phorbol esters/diacylglycerol binding domain (C1 domain)

 Score = 40.5 bits (95), Expect = 8e-07
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H F+ R FK PTFC HC +F+W
Sbjct: 1  HHFVHRTFKSPTFCDHCGEFLW 22

This domain is also known as the Protein kinase C conserved region 1 (C1) domain. Length = 53

>gnl|CDD|237996 cd00029, C1, Protein kinase C conserved region 1 (C1)

 Score = 36.3 bits (84), Expect = 4e-05
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H+F+ + F +PTFC  C+  IW
Sbjct: 1  HRFVRKSFFKPTFCDVCRKSIW 22

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis). Length = 50

>gnl|CDD|197519 smart00109, C1, Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

 Score = 34.4 bits (79), Expect = 2e-04
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          HK + R F +PTFC  C+  IW
Sbjct: 1  HKHVFRTFTKPTFCCVCRKSIW 22

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains. Length = 50

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	63
KOG0696|consensus	683		99.6
KOG0694|consensus	694		99.13
KOG0695|consensus	593		98.86
PF00130	53	C1_1: Phorbol esters/diacylglycerol binding domain	97.74
smart00109	49	C1 Protein kinase C conserved region 1 (C1) domain	97.34
cd00029	50	C1 Protein kinase C conserved region 1 (C1) . Cyst	97.33
KOG4236|consensus	888		94.02
KOG0696|consensus	683		92.59
KOG0694|consensus	694		85.15

>KOG0696|consensus

Probab=99.60  E-value=1.3e-16  Score=124.09  Aligned_cols=50  Identities=64%  Similarity=1.091  Sum_probs=44.7

Q ss_pred             CccccccccccccccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          14 NDMNTKFGLKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        14 ~~~~~~~~~~~~~RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ++.+....+..+.|+||+|++.||+|++|+|.++||+|||||+||.||||
T Consensus        18 ~e~~~~~~~~~f~RkGAlrqKnvhevk~HkF~aRFFKqPTfCsHCkDFiw   67 (683)
T KOG0696|consen   18 GESEGENSMKRFLRKGALRQKNVHEVKSHKFIARFFKQPTFCSHCKDFIW   67 (683)
T ss_pred             CcccchhHHHHHHhhhhhhhcchhhhccceeeehhccCCchhhhhhhhee
Confidence            44455556667789999999999999999999999999999999999999

>KOG0694|consensus

Probab=99.13  E-value=1.9e-11  Score=97.16  Aligned_cols=41  Identities=41%  Similarity=0.883  Sum_probs=37.6

Q ss_pred             ccccccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          23 KIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        23 ~~~~RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ....|+||+.++|||+|.||+|++++|+|||+|++|++|||
T Consensus       140 ~~~~rrga~~~~kVhei~gH~F~aT~l~Qpt~Cs~C~kFi~  180 (694)
T KOG0694|consen  140 SKPRRRGAISQSKVHEIDGHKFGATSLRQPTFCSWCQKFIW  180 (694)
T ss_pred             cCcccccccccceeEEeeCcEEEEeeccCcchhhhhhhhee
Confidence            34458889888999999999999999999999999999999

>KOG0695|consensus

Probab=98.86  E-value=2.1e-10  Score=88.36  Aligned_cols=41  Identities=32%  Similarity=0.705  Sum_probs=39.0

Q ss_pred             ccccccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          23 KIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        23 ~~~~RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ....||||+||+|+|..|||.|.++.|+++++|..|.|.||
T Consensus       112 ksiyrrgarrwrkly~~ngh~fqakr~nrr~~c~ic~d~iw  152 (593)
T KOG0695|consen  112 KSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGICSDRIW  152 (593)
T ss_pred             chHHHhHHHHHHHHHhhcCcchhhhhhccceeeeechhhhh
Confidence            35679999999999999999999999999999999999999

>PF00130 C1_1: Phorbol esters/diacylglycerol binding domain (C1 domain); InterPro: IPR002219 Diacylglycerol (DAG) is an important second messenger

Probab=97.74  E-value=2.5e-05  Score=42.66  Aligned_cols=22  Identities=50%  Similarity=1.389  Sum_probs=19.4

Q ss_pred             ceeeeeecCCccccCCCCCccC
Q psy9785          42 HKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        42 H~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.|+.+.|.+|++|++|+++||
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~   22 (53)
T PF00130_consen    1 HHFVPTTFSKPTYCDVCGKFIW   22 (53)
T ss_dssp             -EEEEEESSSTEB-TTSSSBEC
T ss_pred             CeEEEccCCCCCCCcccCcccC
Confidence            8999999999999999999997

Phorbol esters (PE) are analogues of DAG and potent tumour promoters that cause a variety of physiological changes when administered to both cells and tissues. DAG activates a family of serine/threonine protein kinases, collectively known as protein kinase C (PKC) []. Phorbol esters can directly stimulate PKC. The N-terminal region of PKC, known as C1, has been shown [] to bind PE and DAG in a phospholipid and zinc-dependent fashion. The C1 region contains one or two copies (depending on the isozyme of PKC) of a cysteine-rich domain, which is about 50 amino-acid residues long, and which is essential for DAG/PE-binding. The DAG/PE-binding domain binds two zinc ions; the ligands of these metal ions are probably the six cysteines and two histidines that are conserved in this domain.; GO: 0035556 intracellular signal transduction; PDB: 1RFH_A 2FNF_X 3PFQ_A 1PTQ_A 1PTR_A 2VRW_B 1XA6_A 2ENN_A 1TBN_A 1TBO_A ....

>smart00109 C1 Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)

Probab=97.34  E-value=0.00012  Score=38.34  Aligned_cols=22  Identities=50%  Similarity=1.164  Sum_probs=20.8

Q ss_pred             ceeeeeecCCccccCCCCCccC
Q psy9785          42 HKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        42 H~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.|+...+.+|++|.+|+++||
T Consensus         1 H~~~~~~~~~~~~C~~C~~~i~   22 (49)
T smart00109        1 HHFVERTFKKPTKCCVCRKSIW   22 (49)
T ss_pred             CceEEeccCCCCCccccccccC
Confidence            7899999999999999999998

Some bind phorbol esters and diacylglycerol. Some bind RasGTP. Zinc-binding domains.

>cd00029 C1 Protein kinase C conserved region 1 (C1)

Probab=97.33  E-value=9.1e-05  Score=39.32  Aligned_cols=22  Identities=45%  Similarity=1.213  Sum_probs=21.0

Q ss_pred             ceeeeeecCCccccCCCCCccC
Q psy9785          42 HKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        42 H~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.|+...+.+|++|++|.++||
T Consensus         1 H~f~~~~~~~~~~C~~C~~~i~   22 (50)
T cd00029           1 HRFVRKSFFKPTFCDVCRKSIW   22 (50)
T ss_pred             CccEEeeCCCCCChhhcchhhh
Confidence            8899999999999999999998

Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second messenger, released by activation of Phospholipase D. Phorbol Esters (PE) can act as analogues of DAG and mimic its downstream effects in, for example, tumor promotion. Protein Kinases C are activated by DAG/PE, this activation is mediated by their N-terminal conserved region (C1). DAG/PE binding may be phospholipid dependent. C1 domains may also mediate DAG/PE signals in chimaerins (a family of Rac GTPase activating proteins), RasGRPs (exchange factors for Ras/Rap1), and Munc13 isoforms (scaffolding proteins involved in exocytosis).

>KOG4236|consensus

Probab=94.02  E-value=0.011  Score=48.46  Aligned_cols=27  Identities=26%  Similarity=0.915  Sum_probs=24.0

Q ss_pred             eecCCceeeeeecCCccccCCCCCccC
Q psy9785          37 YNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        37 h~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..|.-|.+-.+-++.||||++|+|.+|
T Consensus       141 ~~i~PH~l~vhSY~~PtFCD~CGEmL~  167 (888)
T KOG4236|consen  141 FQIRPHTLFVHSYKAPTFCDFCGEMLF  167 (888)
T ss_pred             eeeecceeeeecccCchHHHHHHHHHH
Confidence            356789999999999999999999887

>KOG0696|consensus

Probab=92.59  E-value=0.03  Score=44.83  Aligned_cols=24  Identities=38%  Similarity=0.982  Sum_probs=20.8

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      .-|+|..+.+..||||+||+.+++
T Consensus       109 ~kHkf~~~tYssPTFCDhCGsLLy  132 (683)
T KOG0696|consen  109 SKHKFKIHTYSSPTFCDHCGSLLY  132 (683)
T ss_pred             cccceeeeecCCCchhhhHHHHHH
Confidence            349999999999999999998653

>KOG0694|consensus

Probab=85.15  E-value=0.23  Score=40.63  Aligned_cols=24  Identities=33%  Similarity=0.913  Sum_probs=21.9

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      +.|.|..+...+|+||.||+.++|
T Consensus       229 ~Phrf~~~~~q~ptFc~hCGs~L~  252 (694)
T KOG0694|consen  229 NPHRFVKLNRQRPTFCDHCGSVLY  252 (694)
T ss_pred             CCCcchhhhccCccHHHhcchhhh
Confidence            349999999999999999999876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	63
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		8e-13
2enn_A	77	Solution Structure Of The First C1 Domain From Huma		2e-07
2yuu_A	83	Solution Structure Of The First Phorbol EstersDIACY		1e-06
2e73_A	77	Solution Structure Of The Phorbol EstersDIACYLGLYCE		3e-06

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 26 GRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
           RKGAL++KNV+ VK+HKF  RFFKQPTFCSHC DFIW
Sbjct: 22 ARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIW 59

>pdb|2ENN|A Chain A, Solution Structure Of The First C1 Domain From Human Protein Kinase C Theta Length = 77

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          R+GA+K+  V++VK H+F   FF QPTFCS C +F+W
Sbjct: 9  RRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVW 45

>pdb|2YUU|A Chain A, Solution Structure Of The First Phorbol EstersDIACYLGLYCEROL BINDING DOMAIN OF HUMAN PROTEIN Kinase C, Delta Length = 83

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 32 KKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          K+  ++ +K+H+FI  FF QPTFCS CKDF+W
Sbjct: 8  KQAKIHYIKNHEFIATFFGQPTFCSVCKDFVW 39

>pdb|2E73|A Chain A, Solution Structure Of The Phorbol EstersDIACYLGLYCEROL Binding Domain Of Protein Kinase C Gamma Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 19/22 (86%), Positives = 19/22 (86%)
Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          HKF  RFFKQPTFCSHC DFIW
Sbjct: 8  HKFTARFFKQPTFCSHCTDFIW 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	63
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-06
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	5e-15
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	1e-13
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	1e-08
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	1e-08
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	1e-07
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	3e-07
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	9e-07
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	1e-06
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	3e-06
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	2e-05
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	4e-05

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 66.2 bits (161), Expect = 4e-15
 Identities = 29/39 (74%), Positives = 33/39 (84%)

Query: 25 RGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
            RKGAL++KNV+ VK+HKF  RFFKQPTFCSHC DFIW
Sbjct: 21 FARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIW 59

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 41.2 bits (96), Expect = 3e-06
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 42  HKFIPRFFKQPTFCSHCKDFIW 63
           HKF    +  PTFC HC   ++
Sbjct: 103 HKFKIHTYSSPTFCDHCGSLLY 124

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 77

 Score = 61.3 bits (149), Expect = 5e-15
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          R+GA+K+  V++VK H+F   FF QPTFCS C +F+W
Sbjct: 9  RRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVW 45

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 83

 Score = 58.3 bits (141), Expect = 1e-13
 Identities = 20/39 (51%), Positives = 28/39 (71%), Gaps = 1/39 (2%)

Query: 26 GRKG-ALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          G  G + K+  ++ +K+H+FI  FF QPTFCS CKDF+W
Sbjct: 1  GSSGSSGKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVW 39

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 74

 Score = 45.3 bits (107), Expect = 1e-08
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 32 KKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          +   + N K HKF   FFK+P FC  C   I 
Sbjct: 8  EPPKLVNDKPHKFKDHFFKKPKFCDVCARMIV 39

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A Length = 52

 Score = 44.7 bits (106), Expect = 1e-08
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 39 VKDHKFIPRFFKQPTFCSHCKDFIW 63
          +  H F  + F +  FC  C+ F+ 
Sbjct: 1  LTTHNFARKTFLKLAFCDICQKFLL 25

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus} Length = 84

 Score = 42.8 bits (100), Expect = 1e-07
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 33 KKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW 63
          K N    K H+FIP  +  PT C  C   +W
Sbjct: 16 KSNYICHKGHEFIPTLYHFPTNCEACMKPLW 46

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus} Length = 66

 Score = 41.7 bits (98), Expect = 3e-07
 Identities = 7/22 (31%), Positives = 10/22 (45%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H F       PT+C  C+  +W
Sbjct: 14 HNFEVWTATTPTYCYECEGLLW 35

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A* Length = 50

 Score = 40.1 bits (94), Expect = 9e-07
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H+F    +  PTFC HC   +W
Sbjct: 1  HRFKVYNYMSPTFCDHCGSLLW 22

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens} Length = 65

 Score = 40.1 bits (94), Expect = 1e-06
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 40 KDHKFIPRFFKQPTFCSHCKDFIW 63
            H+F    +K PTFC HC   +W
Sbjct: 11 MPHRFKVYNYKSPTFCEHCGTLLW 34

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 85

 Score = 39.5 bits (92), Expect = 3e-06
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 40 KDHKFIPRFFKQPTFCSHCKDFIW 63
            HKF    +  PTFC HC   ++
Sbjct: 16 SKHKFKIHTYGSPTFCDHCGSLLY 39

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus} Length = 59

 Score = 37.2 bits (86), Expect = 2e-05
 Identities = 5/25 (20%), Positives = 10/25 (40%), Gaps = 1/25 (4%)

Query: 40 KDHKFIP-RFFKQPTFCSHCKDFIW 63
          + H+F+       P +C  C   + 
Sbjct: 9  EGHRFVELALRGGPGWCDLCGREVL 33

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus} Length = 72

 Score = 36.5 bits (84), Expect = 4e-05
 Identities = 5/25 (20%), Positives = 10/25 (40%), Gaps = 1/25 (4%)

Query: 40 KDHKFIP-RFFKQPTFCSHCKDFIW 63
          + H+F+       P +C  C   + 
Sbjct: 22 EGHRFVELALRGGPGWCDLCGREVL 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	63
2enn_A	77	NPKC-theta, protein kinase C theta type; zinc bind	99.55
2yuu_A	83	NPKC-delta, protein kinase C delta type; metal bin	99.31
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.17
2row_A	84	RHO-associated protein kinase 2; ATP-binding, coil	98.91
3uej_A	65	NPKC-delta, protein kinase C delta type; proteine	98.8
2db6_A	74	SH3 and cysteine rich domain 3; STAC3, C1 domain,	98.73
1faq_A	52	RAF-1; transferase, serine/threonine-protein kinas	98.58
2enz_A	65	NPKC-theta, protein kinase C theta type; zinc bind	98.49
1y8f_A	66	UNC-13 homolog A, MUNC13-1; cysteine-rich domain,	98.34
1ptq_A	50	Protein kinase C delta type; phosphotransferase; 1	98.26
2eli_A	85	Protein kinase C alpha type; PKC-alpha, PKC-A, str	98.25
1rfh_A	59	RAS association (ralgds/AF-6) domain family 5; zin	98.21
2fnf_X	72	Putative RAS effector NORE1; zinc, signal transduc	98.11
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	97.59
4b6d_A	61	RAC GTPase-activating protein 1; signaling protein	97.57
3ky9_A	587	Proto-oncogene VAV; calponin homology domain, DBL	97.27
2vrw_B	406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	97.05
1kbe_A	49	Kinase suppressor of RAS; KSR, cysteine-rich domai	96.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	93.45

>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=2e-15  Score=89.39  Aligned_cols=42  Identities=48%  Similarity=0.949  Sum_probs=39.9

Q ss_pred             cccccccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          22 LKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        22 ~~~~~RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..+++|+||+|+++||+++||.|.++.|.+||||++|.++||
T Consensus         4 ~~~~~r~ga~r~~~~~~~~~H~F~~~~f~~pt~C~~C~~~lw   45 (77)
T 2enn_A            4 GSSGQRRGAIKQAKVHHVKCHEFTATFFPQPTFCSVCHEFVW   45 (77)
T ss_dssp             CCCCCCCCCCCCCCCEESSSCEEEEECCSSCEECSSSCCEEC
T ss_pred             ccccccCccccccccccCCCCccEEEcCCCCcCccccChhhc
Confidence            457889999999999999999999999999999999999999

>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=7e-13  Score=79.07  Aligned_cols=37  Identities=49%  Similarity=1.038  Sum_probs=35.5

Q ss_pred             ccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          27 RKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        27 RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.+|+|+++||+++||.|+++.|.+||+|++|.++||
T Consensus         3 ~~~a~r~~k~~~~~~H~F~~~~~~~pt~C~~C~~~lw   39 (83)
T 2yuu_A            3 SGSSGKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVW   39 (83)
T ss_dssp             CCCCCCCCCEECGGGCCEEEECCSSCCCCSSSCCCCC
T ss_pred             cccccchhhCcccCCCceEeEeCCCCcChhhcChhhc
Confidence            6789999999999999999999999999999999999

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.17  E-value=2.7e-12  Score=96.76  Aligned_cols=42  Identities=69%  Similarity=1.218  Sum_probs=0.0

Q ss_pred             cccccccchhhhcceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          22 LKIRGRKGALKKKNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        22 ~~~~~RrgA~r~kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      +..+.|+||+|++++|+++||.|.+++|++||||+||+++||
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~H~f~~~~~~~p~~C~~C~~~i~   59 (674)
T 3pfq_A           18 TVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIW   59 (674)
T ss_dssp             ------------------------------------------
T ss_pred             hhhhhccCcccccCCcccCCceEEeeeCCCCCcccccccccc
Confidence            445568999999899999999999999999999999999999

>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}

Probab=98.91  E-value=5.6e-10  Score=68.00  Aligned_cols=30  Identities=37%  Similarity=0.822  Sum_probs=28.2

Q ss_pred             cceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          34 KNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        34 kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..+++++||.|+++.|++||||++|+++||
T Consensus        17 ~~~~~~~~H~F~~~~~~~PT~Cd~C~~~lW   46 (84)
T 2row_A           17 SNYICHKGHEFIPTLYHFPTNCEACMKPLW   46 (84)
T ss_dssp             CCCEEETTEEEEEECCSSCEECSSSSSEEC
T ss_pred             cceEEcCCcceEeEcCCCCcchhhcCHhhh
Confidence            457789999999999999999999999999

>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*

Probab=98.80  E-value=1.7e-09  Score=61.49  Aligned_cols=29  Identities=34%  Similarity=0.868  Sum_probs=27.9

Q ss_pred             ceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          35 NVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        35 KVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      |+|++++|.|.++.|.+||+|++|+++||
T Consensus         3 ~~~~~~~H~F~~~~~~~pt~C~~C~~~l~   31 (65)
T 3uej_A            3 RRASVGSHRFKVYNYMSPTFCDHCGSLLW   31 (65)
T ss_dssp             CCEEEEECCEEEECCSSCCBCTTTCCBCC
T ss_pred             cceEeCCceEEeEeCCCCCcccccChhhh
Confidence            67999999999999999999999999998

>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.73  E-value=3.5e-09  Score=61.92  Aligned_cols=30  Identities=43%  Similarity=0.838  Sum_probs=28.3

Q ss_pred             cceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          34 KNVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        34 kKVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      .+++...||.|.++.|.+||||++|+++||
T Consensus        10 ~k~~~~~~H~F~~~~f~~pt~C~~C~~~lw   39 (74)
T 2db6_A           10 PKLVNDKPHKFKDHFFKKPKFCDVCARMIV   39 (74)
T ss_dssp             CCCSCSSBCCEEEEECSSCEECSSSCCEEC
T ss_pred             cccccCCCCceEEeeCCCCcCchhcChhhc
Confidence            467888999999999999999999999999

>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A

Probab=98.58  E-value=1.8e-08  Score=54.59  Aligned_cols=25  Identities=28%  Similarity=0.781  Sum_probs=24.0

Q ss_pred             cCCceeeeeecCCccccCCCCCccC
Q psy9785          39 VKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        39 v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      +++|.|.++.|.+||+|++|+++||
T Consensus         1 ~~~H~F~~~~~~~pt~C~~C~~~l~   25 (52)
T 1faq_A            1 LTTHNFARKTFLKLAFCDICQKFLL   25 (52)
T ss_dssp             CCCCCCEEECCSSCEECTTSSSEEC
T ss_pred             CCCceeEeEeCCCCcCCCCcccccc
Confidence            5799999999999999999999998

>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}

Probab=98.49  E-value=5.4e-08  Score=55.29  Aligned_cols=29  Identities=34%  Similarity=0.773  Sum_probs=26.3

Q ss_pred             ceeecCCceeeeeecCCccccCCCCCccC
Q psy9785          35 NVYNVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        35 KVh~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      +++...+|.|.++.|.+||+|++|+++||
T Consensus         6 ~~~~~~~H~F~~~~~~~pt~C~~C~~~l~   34 (65)
T 2enz_A            6 SGKIDMPHRFKVYNYKSPTFCEHCGTLLW   34 (65)
T ss_dssp             CCCCCCCCCEEECCCCSCCBCSSSCCBCC
T ss_pred             cCCCCCCCccEeEcCCCCcCchhcChhhe
Confidence            45556899999999999999999999999

>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}

Probab=98.34  E-value=2.3e-07  Score=52.90  Aligned_cols=26  Identities=27%  Similarity=0.721  Sum_probs=22.7

Q ss_pred             ecCCceeeeeecCCccccCCCCCccC
Q psy9785          38 NVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        38 ~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ...+|.|.++.|.+||+|++|.++||
T Consensus        10 ~~~~H~F~~~~~~~pt~C~~C~~~l~   35 (66)
T 1y8f_A           10 GGIQHNFEVWTATTPTYCYECEGLLW   35 (66)
T ss_dssp             ---CCCEEEEECSSCCCCTTTCCCCC
T ss_pred             CCCCcccEeeeCCCCcChhhcChhhc
Confidence            44799999999999999999999999

>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*

Probab=98.26  E-value=4.5e-07  Score=48.53  Aligned_cols=22  Identities=41%  Similarity=1.147  Sum_probs=21.5

Q ss_pred             ceeeeeecCCccccCCCCCccC
Q psy9785          42 HKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        42 H~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.|.++.|.+||+|++|+++||
T Consensus         1 H~F~~~~~~~pt~C~~C~~~l~   22 (50)
T 1ptq_A            1 HRFKVYNYMSPTFCDHCGSLLW   22 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCC
T ss_pred             CCCEeecCCCCCCcCCCCceee
Confidence            8999999999999999999999

>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=4e-07  Score=54.25  Aligned_cols=26  Identities=35%  Similarity=0.855  Sum_probs=24.4

Q ss_pred             ecCCceeeeeecCCccccCCCCCccC
Q psy9785          38 NVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        38 ~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ...+|.|.++.|.+||+|++|.++||
T Consensus        14 ~~~~H~F~~~~~~~pt~C~~C~~~l~   39 (85)
T 2eli_A           14 PRSKHKFKIHTYGSPTFCDHCGSLLY   39 (85)
T ss_dssp             TTTSCCCEEECCSSCCBCSSSCCBCC
T ss_pred             CCCCcccEeeeCCCCcCCcccCcccc
Confidence            45799999999999999999999999

>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}

Probab=98.21  E-value=3.8e-07  Score=51.30  Aligned_cols=27  Identities=19%  Similarity=0.480  Sum_probs=24.2

Q ss_pred             eecCCceeee-eecCCccccCCCCCccC
Q psy9785          37 YNVKDHKFIP-RFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        37 h~v~GH~F~a-~~f~qptfCa~C~efIW   63 (63)
                      ....||.|.+ +.|.+||+|++|+++||
T Consensus         6 ~~~~~H~F~~~~~~~~pt~C~~C~~~i~   33 (59)
T 1rfh_A            6 ERGEGHRFVELALRGGPGWCDLCGREVL   33 (59)
T ss_dssp             CCCSSCCCEECCCSSCCEECTTTCSEEC
T ss_pred             cCCCCCcCeeeeccCCCeEchhcchhhh
Confidence            4558999999 99999999999999884

>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}

Probab=98.11  E-value=1.1e-06  Score=51.36  Aligned_cols=25  Identities=20%  Similarity=0.550  Sum_probs=23.1

Q ss_pred             cCCceeee-eecCCccccCCCCCccC
Q psy9785          39 VKDHKFIP-RFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        39 v~GH~F~a-~~f~qptfCa~C~efIW   63 (63)
                      ..||.|.+ +.|.+||||++|+++||
T Consensus        21 ~~~H~F~~~~~~~~pt~C~~C~~~l~   46 (72)
T 2fnf_X           21 GEGHRFVELALRGGPGWCDLCGREVL   46 (72)
T ss_dssp             CSSCCCEECCCCSSCCBCTTTSSBCS
T ss_pred             CCCCccceeecCCCCcchhhhhHHHH
Confidence            47999999 99999999999999984

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=97.59  E-value=2.8e-05  Score=56.87  Aligned_cols=38  Identities=32%  Similarity=0.733  Sum_probs=24.2

Q ss_pred             cccchhhhccee--ecCCceeeeeecCCccccCCCCCccC
Q psy9785          26 GRKGALKKKNVY--NVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        26 ~RrgA~r~kKVh--~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      .|++++.+..-|  .+..|.|..+.|..||+|.+|+++||
T Consensus       192 ~rea~l~~~~~H~niv~~h~f~~~~~~~pt~C~~C~~~l~  231 (463)
T 3cxl_A          192 VRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMW  231 (463)
T ss_dssp             ---------------CBCCCEEEECCSSCCBCTTTCCBCC
T ss_pred             cccccccccccccccCCCcceEEeecCCCCcchhhhhhhh
Confidence            456665543334  56899999999999999999999998

>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}

Probab=97.57  E-value=3.7e-05  Score=43.74  Aligned_cols=25  Identities=24%  Similarity=0.529  Sum_probs=23.1

Q ss_pred             cCCceeeeeecCCccccCCCCCccC
Q psy9785          39 VKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        39 v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..+|.|+++.|..|++|++|++.||
T Consensus         6 ~~~H~F~~kt~~~~~~C~~Cg~~i~   30 (61)
T 4b6d_A            6 MRLHDFVSKTVIKPESCVPCGKRIK   30 (61)
T ss_dssp             BCCCCEEEEECCSCEECTTTCCEEC
T ss_pred             ccceeEEeeeccCCcccccccCEEE
Confidence            4689999999999999999999886

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A

Probab=97.27  E-value=0.00011  Score=54.83  Aligned_cols=26  Identities=23%  Similarity=0.493  Sum_probs=24.5

Q ss_pred             ecCCceeeeeecCCccccCCCCCccC
Q psy9785          38 NVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        38 ~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..+||.|..+.|.+||+|++|+++||
T Consensus       515 ~~~~H~F~~~~~~~~t~C~~C~~~l~  540 (587)
T 3ky9_A          515 TANGHDFQMFSFEETTSCKACQMLLR  540 (587)
T ss_dssp             TGGGCCEEEECCSSCCBCTTTCSBCC
T ss_pred             cccCCceeEEeCCCCccccccccccc
Confidence            45899999999999999999999998

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A

Probab=97.05  E-value=0.00021  Score=50.49  Aligned_cols=26  Identities=23%  Similarity=0.493  Sum_probs=24.4

Q ss_pred             ecCCceeeeeecCCccccCCCCCccC
Q psy9785          38 NVKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        38 ~v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      .++||.|..+.|.+||+|.+|++++|
T Consensus       343 ~~~~h~f~~~~~~~~t~C~~C~~~~~  368 (406)
T 2vrw_B          343 TANGHDFQMFSFEETTSCKACQMLLR  368 (406)
T ss_dssp             TGGGCCEEEECCSSCCBCTTTCCBCC
T ss_pred             cCCCCCCccccCCCCCCCccccchhc
Confidence            45899999999999999999999998

>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A

Probab=96.92  E-value=0.00051  Score=37.73  Aligned_cols=23  Identities=17%  Similarity=0.522  Sum_probs=20.6

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      -+|.|..+.|. +|+|.+|+++||
T Consensus         3 i~HrF~~~t~~-~t~C~~C~k~i~   25 (49)
T 1kbe_A            3 VTHRFSTKSWL-SQVCNVCQKSMI   25 (49)
T ss_dssp             CCCCEEEECCS-SCCCSSSCCSSC
T ss_pred             CCcccCccCCC-CcCccccCceeE
Confidence            36999999887 699999999998

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=93.45  E-value=0.027  Score=42.43  Aligned_cols=24  Identities=38%  Similarity=0.982  Sum_probs=21.7

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..|.|+.+.+..|+||.+|+++||
T Consensus       101 ~~h~~~~~~~~~~~~C~~C~~~l~  124 (674)
T 3pfq_A          101 SKHKFKIHTYSSPTFCDHCGSLLY  124 (674)
T ss_dssp             -CCCCCEECCSSCCCCSSSCSCCB
T ss_pred             CCcceeecCCCCCCCCCccccccc
Confidence            569999999999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	63
d1xa6a3	62	g.49.1.1 (A:209-270) Beta-chimaerin, middle domain	3e-06
d1faqa_	52	g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId:	1e-05
d1ptqa_	50	g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {M	1e-05
d1tbna_	66	g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus	2e-05
d1r79a_	84	g.49.1.1 (A:) Diacylglycerol kinase delta {Human (	7e-05
d1kbea_	49	g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse	7e-04

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 3e-06
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 40 KDHKFIPRFFKQPTFCSHCKDFIW 63
          K H F    F+ P +C +C +F+W
Sbjct: 3  KTHNFKVHTFRGPHWCEYCANFMW 26

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 52

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 1e-05
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 39 VKDHKFIPRFFKQPTFCSHCKDFIW 63
          +  H F  + F +  FC  C+ F+ 
Sbjct: 1  LTTHNFARKTFLKLAFCDICQKFLL 25

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]} Length = 50

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (83), Expect = 1e-05
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H+F    +  PTFC HC   +W
Sbjct: 1  HRFKVYNYMSPTFCDHCGSLLW 22

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]} Length = 66

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 35.8 bits (82), Expect = 2e-05
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 40 KDHKFIPRFFKQPTFCSHCKDFIW 63
            HKF    +  PTFC HC   ++
Sbjct: 7  NKHKFRLHSYSSPTFCDHCGSLLY 30

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 7e-05
 Identities = 3/22 (13%), Positives = 7/22 (31%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H+++         C+ C     
Sbjct: 28 HQWLEGNLPVSAKCTVCDKTCG 49

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]} Length = 49

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.3 bits (71), Expect = 7e-04
 Identities = 4/22 (18%), Positives = 10/22 (45%), Gaps = 1/22 (4%)

Query: 42 HKFIPRFFKQPTFCSHCKDFIW 63
          H+F  + +     C+ C+  + 
Sbjct: 5  HRFSTKSWLSQV-CNVCQKSMI 25

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	63
d1faqa_	52	RAF-1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d1xa6a3	62	Beta-chimaerin, middle domain {Human (Homo sapiens	97.99
d1tbna_	66	Protein kinase c-gamma {Rat (Rattus rattus) [TaxId	97.88
d1ptqa_	50	Protein kinase C-delta (PKCdelta) {Mouse (Mus musc	97.79
d1kbea_	49	Kinase suppressor of Ras, Ksr {Mouse (Mus musculus	97.23
d1r79a_	84	Diacylglycerol kinase delta {Human (Homo sapiens)	96.72

>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: RAF-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.1e-06  Score=46.90  Aligned_cols=25  Identities=28%  Similarity=0.781  Sum_probs=23.7

Q ss_pred             cCCceeeeeecCCccccCCCCCccC
Q psy9785          39 VKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        39 v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      +++|.|..+.|..|++|++|+++||
T Consensus         1 ~~~H~F~~~~f~~~~~C~~C~~~i~   25 (52)
T d1faqa_           1 LTTHNFARKTFLKLAFCDICQKFLL   25 (52)
T ss_dssp             CCCCCCEEECCSSCEECTTSSSEEC
T ss_pred             CCceEEEEeeCCCCcCCccCCCccc
Confidence            4789999999999999999999998

>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Beta-chimaerin, middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.3e-06  Score=47.87  Aligned_cols=25  Identities=36%  Similarity=1.008  Sum_probs=23.7

Q ss_pred             cCCceeeeeecCCccccCCCCCccC
Q psy9785          39 VKDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        39 v~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..+|.|....|.+||+|++|.++||
T Consensus         2 ~k~H~F~~~~~~~pt~C~~C~~~i~   26 (62)
T d1xa6a3           2 EKTHNFKVHTFRGPHWCEYCANFMW   26 (62)
T ss_dssp             CCCCCCCEECCSSCCBCTTTCCBCC
T ss_pred             CCCCEEEEeeCCCCCCCcccCcccc
Confidence            4699999999999999999999998

>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase c-gamma
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=97.88  E-value=3.1e-06  Score=46.83  Aligned_cols=24  Identities=38%  Similarity=0.984  Sum_probs=23.2

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ++|.|..+.|..|++|.+|.++||
T Consensus         7 ~~H~F~~~~~~~~~~C~~C~~~i~   30 (66)
T d1tbna_           7 NKHKFRLHSYSSPTFCDHCGSLLY   30 (66)
T ss_dssp             CSCCEEECCSSSCCBCSSSCCBCC
T ss_pred             CCCceEEEeCCCCcCCcCCCCccc
Confidence            689999999999999999999998

>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Protein kinase C-delta (PKCdelta)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=5.5e-06  Score=43.56  Aligned_cols=22  Identities=41%  Similarity=1.147  Sum_probs=21.4

Q ss_pred             ceeeeeecCCccccCCCCCccC
Q psy9785          42 HKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        42 H~F~a~~f~qptfCa~C~efIW   63 (63)
                      |.|..+.|.+|++|++|.++||
T Consensus         1 H~F~~~~~~~~~~C~~C~~~i~   22 (50)
T d1ptqa_           1 HRFKVYNYMSPTFCDHCGSLLW   22 (50)
T ss_dssp             CCEEEECCSSCCBCTTTCCBCC
T ss_pred             CceEEecCCCCcCCcccCCccc
Confidence            8999999999999999999998

>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Kinase suppressor of Ras, Ksr
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=8.4e-05  Score=39.48  Aligned_cols=23  Identities=17%  Similarity=0.515  Sum_probs=20.9

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..|.|..++|..|| |.+|+++||
T Consensus         3 i~H~F~~~~~~~~t-C~~C~~~l~   25 (49)
T d1kbea_           3 VTHRFSTKSWLSQV-CNVCQKSMI   25 (49)
T ss_dssp             CCCCEEEECCSSCC-CSSSCCSSC
T ss_pred             CccEEeecCcCCCC-chhhchhhh
Confidence            36999999998888 999999998

>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Cysteine-rich domain
superfamily: Cysteine-rich domain
family: Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)
domain: Diacylglycerol kinase delta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.00035  Score=40.07  Aligned_cols=24  Identities=13%  Similarity=0.293  Sum_probs=22.4

Q ss_pred             CCceeeeeecCCccccCCCCCccC
Q psy9785          40 KDHKFIPRFFKQPTFCSHCKDFIW   63 (63)
Q Consensus        40 ~GH~F~a~~f~qptfCa~C~efIW   63 (63)
                      ..|.|+...|..+++|.+|++.||
T Consensus        26 ~~H~w~~~n~~~~~~C~~C~~~i~   49 (84)
T d1r79a_          26 MPHQWLEGNLPVSAKCTVCDKTCG   49 (84)
T ss_dssp             BCCCEEESCCCTTCBCSSSCCBCC
T ss_pred             CCceEEeCCCCCCCCCcccCcccC
Confidence            359999999999999999999998