Psyllid ID: psy9907
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 116 | ||||||
| 340725989 | 1446 | PREDICTED: hypothetical protein LOC10064 | 0.543 | 0.043 | 0.650 | 7e-19 | |
| 350421385 | 1443 | PREDICTED: hypothetical protein LOC10074 | 0.543 | 0.043 | 0.650 | 9e-19 | |
| 270015112 | 772 | hypothetical protein TcasGA2_TC004579 [T | 0.517 | 0.077 | 0.683 | 1e-18 | |
| 91076232 | 761 | PREDICTED: similar to oxidase/peroxidase | 0.517 | 0.078 | 0.683 | 1e-18 | |
| 328780340 | 1401 | PREDICTED: hypothetical protein LOC41277 | 0.543 | 0.044 | 0.650 | 4e-18 | |
| 332018082 | 809 | Chorion peroxidase [Acromyrmex echinatio | 0.543 | 0.077 | 0.650 | 6e-18 | |
| 157130957 | 840 | oxidase/peroxidase [Aedes aegypti] gi|10 | 0.517 | 0.071 | 0.65 | 1e-17 | |
| 312385709 | 801 | hypothetical protein AND_00462 [Anophele | 0.543 | 0.078 | 0.650 | 1e-17 | |
| 347970011 | 866 | AGAP003502-PA [Anopheles gambiae str. PE | 0.543 | 0.072 | 0.666 | 1e-17 | |
| 357613483 | 812 | hypothetical protein KGM_17144 [Danaus p | 0.543 | 0.077 | 0.634 | 8e-17 |
| >gi|340725989|ref|XP_003401346.1| PREDICTED: hypothetical protein LOC100646756 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 48 YKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVT 107
+ GDARANEN HLT+MHLL ARQHN + QL +NP W+DET+Y+ESRRI+GAQ+QH+T
Sbjct: 448 FAAGDARANENLHLTTMHLLWARQHNRITEQLTKINPSWNDETLYEESRRIVGAQLQHIT 507
Query: 108 SLE 110
E
Sbjct: 508 YQE 510
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350421385|ref|XP_003492825.1| PREDICTED: hypothetical protein LOC100743516 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|270015112|gb|EFA11560.1| hypothetical protein TcasGA2_TC004579 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|91076232|ref|XP_973018.1| PREDICTED: similar to oxidase/peroxidase [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|328780340|ref|XP_396227.4| PREDICTED: hypothetical protein LOC412774 isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|332018082|gb|EGI58696.1| Chorion peroxidase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|157130957|ref|XP_001662097.1| oxidase/peroxidase [Aedes aegypti] gi|108871715|gb|EAT35940.1| AAEL011941-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|312385709|gb|EFR30138.1| hypothetical protein AND_00462 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
| >gi|347970011|ref|XP_309656.4| AGAP003502-PA [Anopheles gambiae str. PEST] gi|333466657|gb|EAA05404.4| AGAP003502-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|357613483|gb|EHJ68534.1| hypothetical protein KGM_17144 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 116 | ||||||
| FB|FBgn0263986 | 830 | cd "cardinal" [Drosophila mela | 0.517 | 0.072 | 0.666 | 8.6e-16 | |
| RGD|1310051 | 698 | Lpo "lactoperoxidase" [Rattus | 0.534 | 0.088 | 0.539 | 1.8e-13 | |
| UNIPROTKB|F1Q057 | 1408 | PXDN "Uncharacterized protein" | 0.491 | 0.040 | 0.614 | 1.9e-13 | |
| UNIPROTKB|F1S9J3 | 1377 | F1S9J3 "Uncharacterized protei | 0.491 | 0.041 | 0.561 | 4.8e-13 | |
| UNIPROTKB|I3LDA4 | 1479 | PXDN "Uncharacterized protein" | 0.491 | 0.038 | 0.561 | 5.3e-13 | |
| UNIPROTKB|F1M335 | 1317 | F1M335 "Uncharacterized protei | 0.491 | 0.043 | 0.578 | 5.9e-13 | |
| MGI|MGI:1916925 | 1475 | Pxdn "peroxidasin homolog (Dro | 0.491 | 0.038 | 0.578 | 6.7e-13 | |
| UNIPROTKB|Q92626 | 1479 | PXDN "Peroxidasin homolog" [Ho | 0.491 | 0.038 | 0.561 | 1.1e-12 | |
| UNIPROTKB|F1RRP2 | 713 | F1RRP2 "Uncharacterized protei | 0.629 | 0.102 | 0.526 | 1.1e-12 | |
| UNIPROTKB|F1NN41 | 1416 | PXDN "Uncharacterized protein" | 0.491 | 0.040 | 0.543 | 1.3e-12 |
| FB|FBgn0263986 cd "cardinal" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 209 (78.6 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 48 YKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVT 107
++ GD RANEN LTSMHLL AR HN LARQL NP W+DE +YQE+R+ILGAQM H+T
Sbjct: 433 FESGDDRANENLLLTSMHLLWARHHNYLARQLQEQNPHWEDERLYQEARKILGAQMAHIT 492
|
|
| RGD|1310051 Lpo "lactoperoxidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1Q057 PXDN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S9J3 F1S9J3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LDA4 PXDN "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M335 F1M335 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1916925 Pxdn "peroxidasin homolog (Drosophila)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q92626 PXDN "Peroxidasin homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RRP2 F1RRP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NN41 PXDN "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 116 | |||
| cd09823 | 378 | cd09823, peroxinectin_like, peroxinectin_like anim | 1e-30 | |
| pfam03098 | 521 | pfam03098, An_peroxidase, Animal haem peroxidase | 4e-25 | |
| cd09826 | 440 | cd09826, peroxidasin_like, Animal heme peroxidase | 1e-23 | |
| cd09822 | 420 | cd09822, peroxinectin_like_bacterial, Uncharacteri | 7e-20 | |
| cd05396 | 370 | cd05396, An_peroxidase_like, Animal heme peroxidas | 2e-19 | |
| cd09824 | 411 | cd09824, myeloperoxidase_like, Myeloperoxidases, e | 9e-19 | |
| cd09825 | 565 | cd09825, thyroid_peroxidase, Thyroid peroxidase (T | 4e-18 | |
| cd09820 | 558 | cd09820, dual_peroxidase_like, Dual oxidase and re | 2e-15 | |
| cd09821 | 570 | cd09821, An_peroxidase_bacterial_2, Uncharacterize | 1e-07 | |
| cd09816 | 490 | cd09816, prostaglandin_endoperoxide_synthase, Anim | 1e-06 | |
| cd09818 | 484 | cd09818, PIOX_like, Animal heme oxidases similar t | 4e-04 |
| >gnl|CDD|188655 cd09823, peroxinectin_like, peroxinectin_like animal heme peroxidases | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 1e-30
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 51 GDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVT 107
GD R NE LTSMH L R+HN +A +L LNP WDDE ++QE+R+I+ AQMQH+T
Sbjct: 69 GDGRVNEQPGLTSMHTLFLREHNRIADELKKLNPHWDDERLFQEARKIVIAQMQHIT 125
|
Peroxinectin is an arthropod protein that plays a role in invertebrate immunity mechanisms. Specifically, peroxinectins are secreted as cell-adhesive and opsonic peroxidases. The immunity mechanism appears to involve an interaction between peroxinectin and a transmembrane receptor of the integrin family. Human myeloperoxidase, which is included in this wider family, has also been reported to interact with integrins. Length = 378 |
| >gnl|CDD|217366 pfam03098, An_peroxidase, Animal haem peroxidase | Back alignment and domain information |
|---|
| >gnl|CDD|188658 cd09826, peroxidasin_like, Animal heme peroxidase domain of peroxidasin and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|188654 cd09822, peroxinectin_like_bacterial, Uncharacterized family of heme peroxidases, mostly bacterial | Back alignment and domain information |
|---|
| >gnl|CDD|188647 cd05396, An_peroxidase_like, Animal heme peroxidases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|188656 cd09824, myeloperoxidase_like, Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases | Back alignment and domain information |
|---|
| >gnl|CDD|188657 cd09825, thyroid_peroxidase, Thyroid peroxidase (TPO) | Back alignment and domain information |
|---|
| >gnl|CDD|188652 cd09820, dual_peroxidase_like, Dual oxidase and related animal heme peroxidases | Back alignment and domain information |
|---|
| >gnl|CDD|188653 cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases | Back alignment and domain information |
|---|
| >gnl|CDD|188648 cd09816, prostaglandin_endoperoxide_synthase, Animal prostaglandin endoperoxide synthase and related bacterial proteins | Back alignment and domain information |
|---|
| >gnl|CDD|188650 cd09818, PIOX_like, Animal heme oxidases similar to plant pathogen-inducible oxygenases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 116 | |||
| PF03098 | 530 | An_peroxidase: Animal haem peroxidase; InterPro: I | 100.0 | |
| PLN02283 | 633 | alpha-dioxygenase | 100.0 | |
| KOG2408|consensus | 719 | 100.0 |
| >PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=272.81 Aligned_cols=112 Identities=34% Similarity=0.408 Sum_probs=91.3
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceec------C-Ccccccccccc----ceeeecCCcccccchhHHHHHHHHHh
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQ------H-NTLHLSFFSVV----FIRYKRGDARANENTHLTSMHLLLAR 70 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~------~-~g~~lp~~~~~----~~~f~~Gd~R~ne~~~l~~~h~lf~R 70 (116)
.||+|+||||+++++++||+ ..++|+|+++ . ++..+|...+. ..||++||.|+||+|+|+++||+|+|
T Consensus 148 ~lD~S~vYGs~~~~~~~LR~-~~~~G~L~~~~~~~~~~~~~~~lp~~~~~~~~~~~~f~~GD~R~ne~~~l~~lhtlflR 226 (530)
T PF03098_consen 148 YLDLSQVYGSSEEQARRLRS-SFKGGKLKSDNGEFPPPNGGGLLPSDDPPTDSGCRCFLAGDPRVNENPGLTALHTLFLR 226 (530)
T ss_dssp SSS-HHHH-SSHHHHHHTBE-SSTTTEB--ETSSEEBBTTBES--B-TSCSSGHHGSB-TSSTTTTSBHHHHHHHHHHHH
T ss_pred eeecccccCCCHHHHHHhhc-chhhhhhhcccccccccCCCCCCCCCcccccccccccccccccccchHHHHHHHHHHHH
Confidence 48999999999999999999 2357888862 1 23356654421 26899999999999999999999999
Q ss_pred hhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 71 QHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 71 eHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
||||||++|++.||+|+||+||||||+||+|+||||||+||||+
T Consensus 227 eHNria~~L~~~np~w~de~lFqeAR~iv~a~~Q~Ivy~E~LP~ 270 (530)
T PF03098_consen 227 EHNRIADELKKINPHWDDERLFQEARRIVIAQYQHIVYNEYLPA 270 (530)
T ss_dssp HHHHHHHHHHHHSTTS-HHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhhhhHhhhhhh
Confidence 99999999999999999999999999999999999999999996
|
Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A .... |
| >PLN02283 alpha-dioxygenase | Back alignment and domain information |
|---|
| >KOG2408|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 116 | ||||
| 2r5l_A | 595 | Crystal Structure Of Lactoperoxidase At 2.4a Resolu | 1e-14 | ||
| 2e9e_A | 595 | Crystal Structure Of The Complex Of Goat Lactoperox | 1e-14 | ||
| 3r5q_A | 595 | Crystal Structure Of Sheep Lactoperoxidase In Compl | 1e-14 | ||
| 2ikc_A | 595 | Crystal Structure Of Sheep Lactoperoxidase At 3.25 | 1e-14 | ||
| 3f9p_C | 467 | Crystal Structure Of Myeloperoxidase From Human Leu | 1e-13 | ||
| 1myp_C | 466 | X-Ray Crystal Structure Of Canine Myeloperoxidase A | 1e-13 | ||
| 1cxp_C | 466 | Cryogenic Crystal Structure Of Human Myeloperoxidas | 1e-13 | ||
| 2o86_A | 595 | Crystal Structure Of A Ternary Complex Of Buffalo L | 1e-10 | ||
| 2z5z_A | 595 | Crystal Structure Of The Complex Of Buffalo Lactope | 1e-10 | ||
| 2gj1_A | 583 | Crystal Structure Of Bovine Lactoperoxidase At 2.3a | 4e-10 | ||
| 2pt3_A | 595 | Crystal Structure Of Bovine Lactoperoxidase At 2.34 | 4e-10 | ||
| 2ips_A | 595 | Crystal Structure Of A Ternary Complex Of Bovine La | 4e-10 | ||
| 2gjm_A | 583 | Crystal Structure Of Buffalo Lactoperoxidase At 2.7 | 4e-10 | ||
| 3erh_A | 595 | First Structural Evidence Of Substrate Specificity | 4e-10 |
| >pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution Length = 595 | Back alignment and structure |
|
| >pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase With Nitrate At 3.25 A Resolution Length = 595 | Back alignment and structure |
| >pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With Tetrahydrofuran At 2.7 A Resolution Length = 595 | Back alignment and structure |
| >pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A Resolution Reveals The Binding Sites For Formate Length = 595 | Back alignment and structure |
| >pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes Length = 467 | Back alignment and structure |
| >pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3 Angstroms Resolution Length = 466 | Back alignment and structure |
| >pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase Isoform C Length = 466 | Back alignment and structure |
| >pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo Lactoperoxidase With Nitrate And Iodide At 2.8 A Resolution Length = 595 | Back alignment and structure |
| >pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo Lactoperoxidase With Fluoride Ion At 3.5a Resolution Length = 595 | Back alignment and structure |
| >pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a Resolution Length = 583 | Back alignment and structure |
| >pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A Resolution Reveals Multiple Anion Binding Sites Length = 595 | Back alignment and structure |
| >pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine Lactoperoxidase With Thiocyanate And Iodide At 3.1 A Resolution Length = 595 | Back alignment and structure |
| >pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a Resolution Length = 583 | Back alignment and structure |
| >pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In Mammalian Peroxidases: Crystal Structures Of Substrate Complexes With Lactoperoxidases From Two Different Species Length = 595 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 116 | |||
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 2e-20 | |
| 1d2v_C | 466 | Myeloperoxidase; heme-protein, oxidoreductase, per | 2e-18 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 3e-18 | |
| 3q9k_A | 595 | Lactoperoxidase, LPO; bovine lactoperoxidase, oxid | 3e-18 |
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587 | Back alignment and structure |
|---|
Score = 83.6 bits (206), Expect = 2e-20
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 47 RYKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHV 106
++ G L + R+HN + L +P+W DE ++Q SR IL + +
Sbjct: 253 QFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKI 312
Query: 107 TSLE 110
+
Sbjct: 313 VIED 316
|
| >1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* Length = 466 | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553 | Back alignment and structure |
|---|
| >3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... Length = 595 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 116 | |||
| 1d2v_C | 466 | Myeloperoxidase; heme-protein, oxidoreductase, per | 100.0 | |
| 3q9k_A | 595 | Lactoperoxidase, LPO; bovine lactoperoxidase, oxid | 100.0 | |
| 3nt1_A | 587 | Prostaglandin-endoperoxide synthase 2; prostagland | 100.0 | |
| 1q4g_A | 553 | Prostaglandin G/H synthase 1; cyclooxygenase, non- | 100.0 |
| >1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=288.79 Aligned_cols=113 Identities=37% Similarity=0.513 Sum_probs=101.1
Q ss_pred ccccCccccCCHHHHhhhhcCCCcCccceecC----Ccc-cccccc------------ccceeeecCCcccccchhHHHH
Q psy9907 2 LLIPSVLYISGDARANENTHLTSMHLLLARQH----NTL-HLSFFS------------VVFIRYKRGDARANENTHLTSM 64 (116)
Q Consensus 2 ~~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~~----~g~-~lp~~~------------~~~~~f~~Gd~R~ne~~~l~~~ 64 (116)
-||+|+||||+++++++||+|++++|+|+++. +|. ++|+.. .+.+||++||.|+||+|+|+++
T Consensus 58 ~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~~GD~R~ne~p~l~~l 137 (466)
T 1d2v_C 58 FVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSM 137 (466)
T ss_dssp SSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCCBTTBCCCCBCCCTTCSGGGGCTTTCCCCBCCSSTTTTSSHHHHHH
T ss_pred ccccccCcCCCHHHHHHHhccCCCCCeeccCCccCCCCCcCCCCCCCCCCcccccccCCCcchhcccCcccccCHHHHHH
Confidence 48999999999999999999976569998753 454 455531 1346999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 65 HLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 65 h~lf~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
||+|+|||||||++|++.||+|+||+||||||+||+|+||||||+||||.
T Consensus 138 htlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ 187 (466)
T 1d2v_C 138 HTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPL 187 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996
|
| >3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ... | Back alignment and structure |
|---|
| >3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ... | Back alignment and structure |
|---|
| >1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 116 | ||||
| d1q4ga1 | 511 | a.93.1.2 (A:74-584) Prostaglandin H2 synthase {She | 1e-18 | |
| g1cxp.1 | 570 | a.93.1.2 (A:,C:) Myeloperoxidase {Human (Homo sapi | 2e-18 | |
| d1cvua1 | 511 | a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mou | 6e-18 |
| >d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} Length = 511 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Myeloperoxidase-like domain: Prostaglandin H2 synthase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 77.7 bits (191), Expect = 1e-18
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 47 RYKRGDARANENTHLTSMHLLLARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHV 106
+ G L + R+HN + L +P W DE ++Q +R IL + +
Sbjct: 211 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 270
Query: 107 TSLENYL 113
+E Y+
Sbjct: 271 V-IEEYV 276
|
| >d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} Length = 511 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 116 | |||
| d1q4ga1 | 511 | Prostaglandin H2 synthase {Sheep (Ovis aries) [Tax | 100.0 | |
| d1cvua1 | 511 | Prostaglandin H2 synthase {Mouse (Mus musculus) [T | 100.0 | |
| g1cxp.1 | 570 | Myeloperoxidase {Human (Homo sapiens) [TaxId: 9606 | 100.0 |
| >d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: Myeloperoxidase-like domain: Prostaglandin H2 synthase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=7.7e-42 Score=284.62 Aligned_cols=110 Identities=18% Similarity=0.104 Sum_probs=98.1
Q ss_pred cccCccccCCHHHHhhhhcCCCcCccceecC-Cccccccc-------------cccceeeecCCcccccchhHHHHHHHH
Q psy9907 3 LIPSVLYISGDARANENTHLTSMHLLLARQH-NTLHLSFF-------------SVVFIRYKRGDARANENTHLTSMHLLL 68 (116)
Q Consensus 3 ~~~S~iYGs~~~~~~~LRs~~~~~g~l~~~~-~g~~lp~~-------------~~~~~~f~~Gd~R~ne~~~l~~~h~lf 68 (116)
||+|+||||+++++.+||+|. +|+|+.+. +|..+|+. .+...||.+||.|+|++|+|+++||+|
T Consensus 155 lD~S~IYGss~~~~~~LRtf~--~GkLk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~~f~aGd~R~n~~pgL~~lhtlf 232 (511)
T d1q4ga1 155 VDLGHIYGDNLERQYQLRLFK--DGKLKYQMLNGEVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIW 232 (511)
T ss_dssp SSCHHHHCSSHHHHHHHBCSS--TTCBCCEEETTEEECCBTTTSCCCCCCCTTCCGGGSBCCSSTTGGGCHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHhccCCC--CCEecccCCCCCcCCCCCCcccccccCCCCCChhhhhhcCcchhcCchhHHhHHHHH
Confidence 899999999999999999985 68888653 44433321 235679999999999999999999999
Q ss_pred HhhhHHHHHHHHhhCCCCCchhhHHHHHHHHHHHHHHhhhcccccc
Q psy9907 69 ARQHNTLARQLVTLNPDWDDETVYQESRRILGAQMQHVTSLENYLC 114 (116)
Q Consensus 69 ~ReHN~ia~~L~~~~p~w~de~lfq~AR~iv~a~~q~I~~~e~lp~ 114 (116)
+|||||||++|++.||+|+||+|||+||+||+|++|||||+||||.
T Consensus 233 lREHNriad~L~~~nP~W~DE~LFQ~AR~Ivia~~q~I~~~EyLp~ 278 (511)
T d1q4ga1 233 LREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQ 278 (511)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHhccHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHhhHHH
Confidence 9999999999999999999999999999999999999999999995
|
| >d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|