Psyllid ID: psy992


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
cHHHHHHHHHHHccccccccccEEEEcHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
ccHHHHHHHHHHHHHHHHHccccEEcccHHHHHHHHccHHHHHHccccHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
lssvytklgkvASTLEYFVDRKWNWSNENVQALWdqlspedqeMFFFDMGQLDWEYHAEALCLGLRLYLvhddltslpAARRKWQKLYIAHCILRAVAVFVLFRIL
lssvytklgkvastLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
****YTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRI*
LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
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LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query106 2.2.26 [Sep-21-2011]
A1ZAI5625 Putative fatty acyl-CoA r yes N/A 0.981 0.166 0.384 8e-18
Q96K12515 Fatty acyl-CoA reductase yes N/A 1.0 0.205 0.339 1e-16
Q7TNT2515 Fatty acyl-CoA reductase yes N/A 0.943 0.194 0.37 2e-16
Q7ZXF5515 Fatty acyl-CoA reductase N/A N/A 0.952 0.196 0.366 6e-16
Q5ZM72515 Fatty acyl-CoA reductase yes N/A 0.952 0.196 0.376 6e-16
Q0P5J1515 Fatty acyl-CoA reductase yes N/A 1.0 0.205 0.349 1e-15
Q8WVX9515 Fatty acyl-CoA reductase no N/A 0.952 0.196 0.376 2e-15
Q5R834515 Fatty acyl-CoA reductase no N/A 0.952 0.196 0.366 5e-15
Q66H50515 Fatty acyl-CoA reductase no N/A 0.952 0.196 0.356 9e-15
Q922J9515 Fatty acyl-CoA reductase no N/A 0.952 0.196 0.356 9e-15
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 Back     alignment and function desciption
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 63/104 (60%)

Query: 3   SVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALC 62
           +V  K+ K    LEYF  R+W + ++NV AL   LSP+D+E+F FD+  ++W+ + E   
Sbjct: 494 NVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVERYV 553

Query: 63  LGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL 106
           LG R +L      SLPA+R++  +LY  H + + VAV + +R L
Sbjct: 554 LGFREFLFKQRPESLPASRKRMLRLYYLHQLTKLVAVLLTWRFL 597




Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 Back     alignment and function description
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 Back     alignment and function description
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 Back     alignment and function description
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 Back     alignment and function description
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 Back     alignment and function description
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
193622556 551 PREDICTED: putative fatty acyl-CoA reduc 0.971 0.186 0.519 2e-25
328720028 553 PREDICTED: putative fatty acyl-CoA reduc 0.886 0.169 0.531 2e-24
328720032 499 PREDICTED: putative fatty acyl-CoA reduc 0.886 0.188 0.531 6e-23
326510115 552 predicted protein [Hordeum vulgare subsp 0.990 0.190 0.419 9e-22
328720030 552 PREDICTED: putative fatty acyl-CoA reduc 0.990 0.190 0.4 7e-21
300116409 541 uncharacterized protein LOC411983 [Apis 0.962 0.188 0.421 3e-19
380028667 429 PREDICTED: putative fatty acyl-CoA reduc 0.962 0.237 0.421 9e-19
270008642 516 hypothetical protein TcasGA2_TC015188 [T 1.0 0.205 0.367 3e-18
298402911 626 fatty-acyl CoA reductase 2 [Ostrinia nub 0.886 0.150 0.425 3e-18
383865013 540 PREDICTED: putative fatty acyl-CoA reduc 0.962 0.188 0.411 3e-18
>gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 1/104 (0%)

Query: 1   LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEA 60
           L  +Y K+ KV   L YF D++W ++N+ V ALW  L  +DQ++F FD+ QL WEY ++A
Sbjct: 432 LMKIYKKIDKVRDILAYFSDKEWTFTNDRVLALWKSLDSQDQDIFNFDINQLSWEYFSQA 491

Query: 61  LCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRA-VAVFVLF 103
            CLGLR+YLV DD+ +LPAAR+KW+KLYIAH  L+  V  F+L+
Sbjct: 492 HCLGLRVYLVKDDIHTLPAARKKWEKLYIAHTGLQVFVYAFLLY 535




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328720032|ref|XP_001949806.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|326510115|dbj|BAJ87274.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|328720030|ref|XP_001944359.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|300116409|ref|NP_001177849.1| uncharacterized protein LOC411983 [Apis mellifera] gi|298569767|gb|ADI87412.1| putative fatty acyl-CoA reductase [Apis mellifera] Back     alignment and taxonomy information
>gi|380028667|ref|XP_003698013.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|270008642|gb|EFA05090.1| hypothetical protein TcasGA2_TC015188 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|298402911|gb|ADI82775.1| fatty-acyl CoA reductase 2 [Ostrinia nubilalis] Back     alignment and taxonomy information
>gi|383865013|ref|XP_003707971.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
UNIPROTKB|F8VV73418 FAR2 "Fatty acyl-CoA reductase 1.0 0.253 0.339 2.1e-16
UNIPROTKB|E2R495515 FAR2 "Uncharacterized protein" 1.0 0.205 0.358 2.8e-16
UNIPROTKB|F1SGA0515 FAR2 "Uncharacterized protein" 1.0 0.205 0.339 2.8e-16
FB|FBgn0034145625 CG5065 [Drosophila melanogaste 0.981 0.166 0.384 3.3e-16
UNIPROTKB|Q96K12515 FAR2 "Fatty acyl-CoA reductase 1.0 0.205 0.339 3.6e-16
UNIPROTKB|E9PPB8139 FAR1 "Fatty acyl-CoA reductase 0.943 0.719 0.38 6e-16
UNIPROTKB|D4A2S1503 Far2 "Protein Far2" [Rattus no 0.943 0.198 0.37 7.3e-16
UNIPROTKB|Q0P5J1515 FAR2 "Fatty acyl-CoA reductase 1.0 0.205 0.349 7.7e-16
MGI|MGI:2687035515 Far2 "fatty acyl CoA reductase 0.943 0.194 0.37 7.7e-16
RGD|1565966515 Far2 "fatty acyl CoA reductase 0.943 0.194 0.37 7.7e-16
UNIPROTKB|F8VV73 FAR2 "Fatty acyl-CoA reductase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 36/106 (33%), Positives = 64/106 (60%)

Query:     1 LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEA 60
             ++ +  +L +  S LEYF++R W WS  N + L  +LSPEDQ +F FD+ QL+W  + E 
Sbjct:   280 MTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIEN 339

Query:    61 LCLGLRLYLVHDDLTSLPAARRKWQKLYIAHCILRAVAVFVLFRIL 106
               LG++ YL+ +D+  +P A+++ ++L   H +       + +R+L
Sbjct:   340 YVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLL 385




GO:0000166 "nucleotide binding" evidence=IEA
GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA
GO:0005777 "peroxisome" evidence=IEA
GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA
UNIPROTKB|E2R495 FAR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SGA0 FAR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q96K12 FAR2 "Fatty acyl-CoA reductase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E9PPB8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D4A2S1 Far2 "Protein Far2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2687035 Far2 "fatty acyl CoA reductase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1565966 Far2 "fatty acyl CoA reductase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query106
cd0907192 cd09071, FAR_C, C-terminal domain of fatty acyl Co 2e-21
pfam0301594 pfam03015, Sterile, Male sterility protein 6e-16
PLN02503605 PLN02503, PLN02503, fatty acyl-CoA reductase 2 0.001
>gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases Back     alignment and domain information
 Score = 80.3 bits (199), Expect = 2e-21
 Identities = 30/69 (43%), Positives = 45/69 (65%)

Query: 1  LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEA 60
          L  +Y K+ K+   LEYF   +W + N+N +ALW++LS ED+E+F FD+  +DW+ + E 
Sbjct: 23 LLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFEN 82

Query: 61 LCLGLRLYL 69
             GLR YL
Sbjct: 83 YIPGLRKYL 91


C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92

>gnl|CDD|111859 pfam03015, Sterile, Male sterility protein Back     alignment and domain information
>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 106
PF0301594 Sterile: Male sterility protein; InterPro: IPR0042 99.96
cd0907192 FAR_C C-terminal domain of fatty acyl CoA reductas 99.94
KOG1221|consensus467 99.93
PLN02503605 fatty acyl-CoA reductase 2 99.82
PLN02996491 fatty acyl-CoA reductase 99.81
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 93.4
PF05208 368 ALG3: ALG3 protein; InterPro: IPR007873 The format 90.26
KOG2762|consensus 429 88.74
PF11084141 DUF2621: Protein of unknown function (DUF2621); In 81.41
>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms Back     alignment and domain information
Probab=99.96  E-value=1.4e-29  Score=161.58  Aligned_cols=72  Identities=39%  Similarity=0.850  Sum_probs=70.8

Q ss_pred             ChhHHHHHHHHHhhhhhhhcCeeEEecccHHHHHhcCCccCccceeccCCCCCHHHHHHHHHHHHHHHhhcC
Q psy992            1 LSSVYTKLGKVASTLEYFVDRKWNWSNENVQALWDQLSPEDQEMFFFDMGQLDWEYHAEALCLGLRLYLVHD   72 (106)
Q Consensus         1 l~k~~~ki~~~~~~l~~Ft~~eW~F~~~n~~~L~~~ls~~D~~~F~fD~~~idW~~Y~~~~~~Gir~yllke   72 (106)
                      |+|+++|+.+++++++||+++||+|+|+|+.+|++.|||+|++.|+||+++|||++|+.++++|+|+|++||
T Consensus        23 ~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~~~~~G~rkyllke   94 (94)
T PF03015_consen   23 MVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYFRNYIPGIRKYLLKE   94 (94)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999999999999999999999999999999999999999999999998



The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process

>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases Back     alignment and domain information
>KOG1221|consensus Back     alignment and domain information
>PLN02503 fatty acyl-CoA reductase 2 Back     alignment and domain information
>PLN02996 fatty acyl-CoA reductase Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate Back     alignment and domain information
>KOG2762|consensus Back     alignment and domain information
>PF11084 DUF2621: Protein of unknown function (DUF2621); InterPro: IPR020203 This entry represents a group of uncharacterised proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query106
1fjk_A52 Cardiac phospholamban; helix, membrane protein; NM 83.65
>1fjk_A Cardiac phospholamban; helix, membrane protein; NMR {Sus scrofa} SCOP: j.37.1.1 PDB: 1fjp_A 2kyv_A 1zll_A 2hyn_A 1n7l_A 2kb7_P 1plp_A Back     alignment and structure
Probab=83.65  E-value=2.7  Score=22.63  Aligned_cols=19  Identities=26%  Similarity=0.413  Sum_probs=15.7

Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q psy992           73 DLTSLPAARRKWQKLYIAH   91 (106)
Q Consensus        73 ~~~~l~~ar~~~~~l~~~~   91 (106)
                      ..|..|+||+.++-+++--
T Consensus        17 ~ie~~~qarqnlqelfvnf   35 (52)
T 1fjk_A           17 TIEMPQQARQNLQNLFINF   35 (52)
T ss_dssp             SSSSHHHHHHHHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHHHHH
Confidence            5678999999999987654




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00