Psyllid ID: psy9984

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFEM
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHcHHHHHHccccccHHHHHHHHHHHHHHccccEEEccccccccEEcccHHHHHHHHHHHHHHHHHcccEEEccccccccccEEccccHHHHHHHHHHccccHHHHHHHHHHcEEEccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEcEEEEccccEEEEEccccHHHHHHHHHHHHHHHHcccEEEEccccccccEEEccHHHHHHHHHHHHHHHHHccEEEEEcccccccccccccccHHHHHHHHHHccccHHHHHHHHHccEEEEcccEEEEccccccc
Coil and Loop (DISEMBL)
PEPAVLYNLQVRfcqhnaiytycgfsalDQEVIFRILSSILHLgniqfsggshgdtdscsfsaLDQEVIFRILSSILHLgniqfsggshgdtdscsiapssgslaAFCDILYNIDRDEFRRCLTHRKITTMQesfnkpmsvfem
Flexible Loop (DISEMBL)
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKIttmqesfnkpmsvfem
Low Complexity Region (SEG)
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFEM
Disordered region (IsUnstruct)
****VLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSH*****CSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKIT***************
Disordered Region (DISOPRED)
***AVLYNLQVRFCQHNAIYTYCG****DQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGS************SGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVF**
Disordered Region (DISEMBL)
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFEM
Disordered Region (DISPRO)
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGS**DTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
PEPAVLYNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q02440	1829	Unconventional myosin-Va	yes	N/A	0.493	0.038	0.453	3e-12
Q99104	1853	Unconventional myosin-Va	yes	N/A	0.493	0.038	0.453	2e-11
Q9QYF3	1828	Unconventional myosin-Va	yes	N/A	0.493	0.038	0.453	3e-11
Q9Y4I1	1855	Unconventional myosin-Va	yes	N/A	0.493	0.038	0.44	1e-10
P21271	1818	Unconventional myosin-Vb	no	N/A	0.673	0.053	0.361	4e-10
P70569	1846	Unconventional myosin-Vb	no	N/A	0.506	0.039	0.407	2e-09
Q9ULV0	1848	Unconventional myosin-Vb	no	N/A	0.506	0.039	0.394	7e-09
Q9UKN7	3530	Unconventional myosin-XV	no	N/A	0.652	0.026	0.324	1e-06
Q9QZZ4	3511	Unconventional myosin-XV	no	N/A	0.652	0.026	0.296	8e-06
Q9NQX4	1742	Unconventional myosin-Vc	no	N/A	0.493	0.040	0.333	3e-05

>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. May be involved in melanosome transport, or alternatively, it may be required for some polarization process involved in dendrite formation.
Gallus gallus (taxid: 9031)

>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVGFASR---DSDSCTIPPKHEPLTIFCDLM-GVDYEEMCHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.

Mus musculus (taxid: 10090)

>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVGFASR---DSDSCTIPPKHEPLIIFCDLM-GVDYEEMCHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.

Rattus norvegicus (taxid: 10116)

>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D DSC+I P    L  FC+++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVGFTS---RDADSCTIPPKHEPLCIFCELM-GVDYEEMCHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.

Homo sapiens (taxid: 9606)

>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 42  HLGNIQFSGGSHGDTDSCSFSALD--------QEVIFRILSSILHLGNIQFSGGSHGDTD 93
           H GN    G +  D    +  AL         Q  IF+I++SILHLG+++    S  D D
Sbjct: 290 HGGNTTIEGVNDADDFEKTRQALTLLGVRDSHQISIFKIIASILHLGSVEIQ--SERDGD 347

Query: 94  SCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSV 141
           SCSI+P    L+ FC +L  I+  +    L HRK+ T  E++ K MS+
Sbjct: 348 SCSISPQDEHLSNFCSLL-GIEHSQMEHWLCHRKLVTTSETYVKTMSL 394

May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation (By similarity). Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane (By similarity). Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells (By similarity). Together with RAB11A and RAB8A participates in epithelial cell polarization (By similarity). Together with RAB25 regulates transcytosis.

Mus musculus (taxid: 10090)

>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IF+I++SILHLG+++    +  D DSCSI+P    L+ FC +L  I+  +    L H
Sbjct: 322 QISIFKIIASILHLGSVEIQ--AERDGDSCSISPQDEHLSNFCRLL-GIEHSQMEHWLCH 378

Query: 126 RKITTMQESFNKPMSV 141
           RK+ T  E++ K MS+
Sbjct: 379 RKLVTTSETYVKTMSL 394

May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation (By similarity). Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane (By similarity). Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells (By similarity). Together with RAB11A and RAB8A participates in epithelial cell polarization (By similarity). Together with RAB25 regulates transcytosis.

Rattus norvegicus (taxid: 10116)

>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 3/76 (3%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IF+I++SILHLG++     +  D DSCSI+P    L+ FC +L  ++  +    L H
Sbjct: 322 QMSIFKIIASILHLGSVAIQ--AERDGDSCSISPQDVYLSNFCRLL-GVEHSQMEHWLCH 378

Query: 126 RKITTMQESFNKPMSV 141
           RK+ T  E++ K MS+
Sbjct: 379 RKLVTTSETYVKTMSL 394

May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation. Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane. Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells. Together with RAB11A and RAB8A participates in epithelial cell polarization. Together with RAB25 regulates transcytosis.

Homo sapiens (taxid: 9606)

>sp|Q9UKN7|MYO15_HUMAN Unconventional myosin-XV OS=Homo sapiens GN=MYO15A PE=1 SV=2

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 14/108 (12%)

Query: 44   GNIQFSGGSHGD--------TDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSC 95
            GN + +G S  D         +   FS+ DQ+ IFRIL+SILHLGN+ F      +TD+ 
Sbjct: 1442 GNCEIAGKSDADDFRRLLAAMEVLGFSSEDQDSIFRILASILHLGNVYF---EKYETDAQ 1498

Query: 96   SIAP--SSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSV 141
             +A   S+  + A  ++L  I  +  ++ +T +   TM+E    P++V
Sbjct: 1499 EVASVVSAREIQAVAELL-QISPEGLQKAITFKVTETMREKIFTPLTV 1545

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Required for the arrangement of stereocilia in mature hair bundles.

Homo sapiens (taxid: 9606)

>sp|Q9QZZ4|MYO15_MOUSE Unconventional myosin-XV OS=Mus musculus GN=Myo15a PE=1 SV=2

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 14/108 (12%)

Query: 44   GNIQFSGGSHGD--------TDSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSC 95
            GN + +G S  D         +   F++ DQ+ IFRIL+SILHLGN+ F      +TD+ 
Sbjct: 1426 GNCEIAGKSDADDFRRLLAAMEVLGFTSEDQDSIFRILASILHLGNVYF---EKHETDAQ 1482

Query: 96   SIAP--SSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSV 141
             +A   S+  + A  ++L  +  +  ++ +T +   T++E    P++V
Sbjct: 1483 EVASVVSAREIQAVAELL-QVSPEGLQKAITFKVTETIREKIFTPLTV 1529

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). Required for the arrangement of stereocilia in mature hair bundles.

Mus musculus (taxid: 10090)

>sp|Q9NQX4|MYO5C_HUMAN Unconventional myosin-Vc OS=Homo sapiens GN=MYO5C PE=1 SV=2

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  +F+IL++ILHLGN+Q +   +   +  S++     L  FC++L  ++     + L +
Sbjct: 320 QMDVFKILAAILHLGNVQITAVGN---ERSSVSEDDSHLKVFCELL-GLESGRVAQWLCN 375

Query: 126 RKITTMQESFNKPMS 140
           RKI T  E+  KPM+
Sbjct: 376 RKIVTSSETVVKPMT 390

May be involved in transferrin trafficking. Likely to power actin-based membrane trafficking in many physiologically crucial tissues.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
345320885	819	PREDICTED: myosin-XV-like, partial [Orni	0.784	0.137	0.408	1e-12
61680177	766	Chain A, Crystal Structure Of Myosin V M	0.493	0.092	0.453	2e-10
37927130	795	Chain A, Crystal Structure Of Myosin V M	0.493	0.089	0.453	2e-10
46048699	1829	unconventional myosin-Va [Gallus gallus]	0.493	0.038	0.453	2e-10
99032071	1080	Chain A, 3-D Structure Of Myosin-V Inhib	0.493	0.065	0.453	2e-10
3980058	1830	p190 myosin heavy chain [Gallus gallus]	0.493	0.038	0.453	2e-10
68445604	1851	myosin Va [Sus scrofa]	0.493	0.038	0.466	3e-10
350578627	1855	PREDICTED: myosin-Va [Sus scrofa]	0.493	0.038	0.466	3e-10
395503293	1845	PREDICTED: unconventional myosin-Va [Sar	0.513	0.040	0.435	5e-10
328703271	868	PREDICTED: myosin-Va-like [Acyrthosiphon	0.618	0.102	0.398	6e-10

>gi|345320885|ref|XP_003430359.1| PREDICTED: myosin-XV-like, partial [Ornithorhynchus anatinus]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)

Query: 25  FSALDQEVIFRILSSILHLGNIQFS---GGS-----HGDTDS----------CSFSALDQ 66
           FSA DQ  IFRILSSILHLGN+ F    GG+       DTD            +FSA DQ
Sbjct: 80  FSAEDQNNIFRILSSILHLGNVYFEKYEGGNCEIPGKSDTDDFRRLLGAMEVLNFSAEDQ 139

Query: 67  EVIFRILSSILHLGNIQFSGGSHGDTDSCSIAP--SSGSLAAFCDILYNIDRDEFRRCLT 124
             IFRILSSILHLGN+ F      +TD+  +A   S+  +    ++L  I  +  +R +T
Sbjct: 140 NNIFRILSSILHLGNVYF---EKYETDAQEVASVVSAREIQVVAELL-QISPEGLQRAIT 195

Query: 125 HRKITTMQESFNKPMSV 141
            +   TM+E    P++V
Sbjct: 196 FKVTETMREKIFTPLTV 212

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|61680177|pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free gi|61680178|pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free gi|61680179|pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free gi|61680180|pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|37927130|pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free gi|61680169|pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide Soaked In 10 Mm Mgadp gi|61680171|pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain + Adp-Befx - Near Rigor

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|46048699|ref|NP_990631.1| unconventional myosin-Va [Gallus gallus] gi|547967|sp|Q02440.1|MYO5A_CHICK RecName: Full=Unconventional myosin-Va; AltName: Full=Dilute myosin heavy chain, non-muscle; AltName: Full=Myosin heavy chain p190; AltName: Full=Myosin-V gi|63365|emb|CAA47673.1| myosin I heavy chain isoform [Gallus gallus]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|99032071|pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State gi|99032078|pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|3980058|emb|CAA77782.1| p190 myosin heavy chain [Gallus gallus]

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|68445604|dbj|BAE03307.1| myosin Va [Sus scrofa]

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D+DSC+I P    L+ FCD++  +D DE    L H
Sbjct: 321 QMGIFRILAGILHLGNVGFTSR---DSDSCTIPPKHEPLSIFCDLM-GVDYDEMCHWLCH 376

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 377 RKLATATETYIKPIS 391

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|350578627|ref|XP_001926803.4| PREDICTED: myosin-Va [Sus scrofa]

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D+DSC+I P    L+ FCD++  +D DE    L H
Sbjct: 322 QMGIFRILAGILHLGNVGFTSR---DSDSCTIPPKHEPLSIFCDLM-GVDYDEMCHWLCH 377

Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395503293|ref|XP_003756003.1| PREDICTED: unconventional myosin-Va [Sarcophilus harrisii]

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN+ F+     D+DSCSI P    L+ FCD++  ++ +E    L H
Sbjct: 313 QMGIFRILAGILHLGNVGFTSR---DSDSCSIPPKHEPLSIFCDLM-GVEYEEMSHWLCH 368

Query: 126 RKITTMQESFNKPMSVFE 143
           RK+ T  E++ KP+  F+
Sbjct: 369 RKLATATETYIKPIPKFQ 386

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328703271|ref|XP_003242151.1| PREDICTED: myosin-Va-like [Acyrthosiphon pisum]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 14/103 (13%)

Query: 53  HGDTDSCS------------FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPS 100
           H D DS S            FS   Q  I+ ILSSILHLGNI+    + GD+DSCSI+ +
Sbjct: 283 HSDNDSQSINETVNALNTLGFSEEQQYSIWEILSSILHLGNIEIDKNT-GDSDSCSISSN 341

Query: 101 SGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFE 143
             SL     +L +I++ E ++ L +R+I ++ E+F KPM+  E
Sbjct: 342 DPSLKIVSTLL-DINKGELQKWLCYRRIVSLNETFEKPMTAVE 383

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
UNIPROTKB|H9KZX6	902	H9KZX6 "Uncharacterized protei	0.506	0.080	0.428	3.7e-17
UNIPROTKB|F1NQB6	1832	MYO5A "Unconventional myosin-V	0.472	0.037	0.458	4.5e-17
UNIPROTKB|G3MZH3	654	G3MZH3 "Uncharacterized protei	0.472	0.103	0.458	4.9e-17
UNIPROTKB|F1PX69	596	MYO5B "Uncharacterized protein	0.486	0.117	0.397	6.4e-17
UNIPROTKB|Q02440	1829	MYO5A "Unconventional myosin-V	0.472	0.037	0.458	7.2e-17
UNIPROTKB|F1NK42	1853	MYO5A "Unconventional myosin-V	0.472	0.036	0.458	7.4e-17
UNIPROTKB|F1NK41	1857	MYO5A "Unconventional myosin-V	0.472	0.036	0.458	7.5e-17
UNIPROTKB|F1RZD2	1896	MYO5A "Uncharacterized protein	0.472	0.035	0.472	1.3e-16
MGI|MGI:105976	1853	Myo5a "myosin VA" [Mus musculu	0.472	0.036	0.458	4e-16
RGD|3143	1828	Myo5a "myosin VA" [Rattus norv	0.472	0.037	0.458	5e-16

UNIPROTKB|H9KZX6 H9KZX6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 150 (57.9 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 33/77 (42%), Positives = 47/77 (61%)

Query:    65 DQEVIFRILSSILHLGNIQFSGGS-HGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCL 123
             DQ  +F IL++ILHLGN+   G   HGD   C + P+S +L  FC +L  I+  +  R L
Sbjct:   245 DQLELFAILAAILHLGNVTIRGRDRHGD--GCFVEPNSEALGLFCALL-GIEEAQVTRWL 301

Query:   124 THRKITTMQESFNKPMS 140
              HRK+ T  E++ KP+S
Sbjct:   302 CHRKLVTAGETYMKPLS 318

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1NQB6 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
 Identities = 33/72 (45%), Positives = 47/72 (65%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   328 IFRILAGILHLGNVEFASR---DSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCHRKL 383

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   384 ATATETYIKPIS 395

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|G3MZH3 G3MZH3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 157 (60.3 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN+ F      D+DSC+I P    L+ FCD++  +D +E    L HRK+
Sbjct:   314 IFRILAGILHLGNVVFMSR---DSDSCTIPPKHEPLSIFCDLM-GVDFEELCHWLCHRKL 369

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   370 ATATETYIKPIS 381

GO:0051015 "actin filament binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1PX69 MYO5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 148 (57.2 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IF+I++SILHLGN++    +  D DSCS++P    L +FC +L  ++  +    L HRK+
Sbjct:   329 IFKIIASILHLGNVEIQ--AERDGDSCSVSPQDEHLNSFCRLL-GVEHSQMEHWLCHRKL 385

Query:   129 TTMQESFNKPMSV 141
              T  E++ K MS+
Sbjct:   386 VTTSETYVKTMSL 398

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|Q02440 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
 Identities = 33/72 (45%), Positives = 47/72 (65%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   325 IFRILAGILHLGNVEFASR---DSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCHRKL 380

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   381 ATATETYIKPIS 392

GO:0003779 "actin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISS

GO:0072659 "protein localization to plasma membrane" evidence=ISS

GO:0032593 "insulin-responsive compartment" evidence=ISS

GO:0000146 "microfilament motor activity" evidence=IDA

GO:0060001 "minus-end directed microfilament motor activity" evidence=IDA

GO:0031941 "filamentous actin" evidence=IDA

GO:0005516 "calmodulin binding" evidence=RCA

UNIPROTKB|F1NK42 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
 Identities = 33/72 (45%), Positives = 47/72 (65%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   324 IFRILAGILHLGNVEFASR---DSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCHRKL 379

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   380 ATATETYIKPIS 391

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1NK41 MYO5A "Unconventional myosin-Va" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
 Identities = 33/72 (45%), Positives = 47/72 (65%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   325 IFRILAGILHLGNVEFASR---DSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCHRKL 380

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   381 ATATETYIKPIS 392

GO:0005524 "ATP binding" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005882 "intermediate filament" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0007268 "synaptic transmission" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0030073 "insulin secretion" evidence=IEA

GO:0030318 "melanocyte differentiation" evidence=IEA

GO:0031585 "regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity" evidence=IEA

GO:0031987 "locomotion involved in locomotory behavior" evidence=IEA

GO:0032252 "secretory granule localization" evidence=IEA

GO:0032402 "melanosome transport" evidence=IEA

GO:0032593 "insulin-responsive compartment" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0035371 "microtubule plus end" evidence=IEA

GO:0042438 "melanin biosynthetic process" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

GO:0042476 "odontogenesis" evidence=IEA

GO:0042552 "myelination" evidence=IEA

GO:0042640 "anagen" evidence=IEA

GO:0042641 "actomyosin" evidence=IEA

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0051643 "endoplasmic reticulum localization" evidence=IEA

GO:0072659 "protein localization to plasma membrane" evidence=IEA

UNIPROTKB|F1RZD2 MYO5A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 164 (62.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN+ F+     D+DSC+I P    L+ FCD++  +D DE    L HRK+
Sbjct:   325 IFRILAGILHLGNVGFTSR---DSDSCTIPPKHEPLSIFCDLM-GVDYDEMCHWLCHRKL 380

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   381 ATATETYIKPIS 392

GO:0072659 "protein localization to plasma membrane" evidence=IEA

GO:0051643 "endoplasmic reticulum localization" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=IEA

GO:0042641 "actomyosin" evidence=IEA

GO:0042640 "anagen" evidence=IEA

GO:0042552 "myelination" evidence=IEA

GO:0042476 "odontogenesis" evidence=IEA

GO:0042470 "melanosome" evidence=IEA

GO:0042438 "melanin biosynthetic process" evidence=IEA

GO:0035371 "microtubule plus end" evidence=IEA

GO:0032869 "cellular response to insulin stimulus" evidence=IEA

GO:0032593 "insulin-responsive compartment" evidence=IEA

GO:0032402 "melanosome transport" evidence=IEA

GO:0032252 "secretory granule localization" evidence=IEA

GO:0031987 "locomotion involved in locomotory behavior" evidence=IEA

GO:0031585 "regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity" evidence=IEA

GO:0030318 "melanocyte differentiation" evidence=IEA

GO:0030073 "insulin secretion" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0007268 "synaptic transmission" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0005882 "intermediate filament" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:105976 Myo5a "myosin VA" [Mus musculus (taxid:10090)]

 Score = 159 (61.0 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN+ F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   325 IFRILAGILHLGNVGFASR---DSDSCTIPPKHEPLTIFCDLM-GVDYEEMCHWLCHRKL 380

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   381 ATATETYIKPIS 392

GO:0000146 "microfilament motor activity" evidence=ISO;IDA

GO:0000149 "SNARE binding" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001726 "ruffle" evidence=ISO

GO:0001750 "photoreceptor outer segment" evidence=IDA

GO:0003774 "motor activity" evidence=ISO;IDA

GO:0003779 "actin binding" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0005524 "ATP binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005882 "intermediate filament" evidence=IDA

GO:0006582 "melanin metabolic process" evidence=IMP

GO:0006887 "exocytosis" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0007601 "visual perception" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=ISO

GO:0008152 "metabolic process" evidence=IDA

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0016459 "myosin complex" evidence=IDA

GO:0017075 "syntaxin-1 binding" evidence=ISO

GO:0017137 "Rab GTPase binding" evidence=IPI

GO:0017157 "regulation of exocytosis" evidence=ISO

GO:0030048 "actin filament-based movement" evidence=ISO;IDA

GO:0030050 "vesicle transport along actin filament" evidence=ISO;TAS

GO:0030073 "insulin secretion" evidence=IMP

GO:0030141 "secretory granule" evidence=ISO;IDA

GO:0030318 "melanocyte differentiation" evidence=IMP

GO:0030424 "axon" evidence=ISO

GO:0031585 "regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0032252 "secretory granule localization" evidence=ISO;IMP

GO:0032400 "melanosome localization" evidence=IMP

GO:0032402 "melanosome transport" evidence=IDA;IMP

GO:0032593 "insulin-responsive compartment" evidence=IDA

GO:0032869 "cellular response to insulin stimulus" evidence=IMP

GO:0035371 "microtubule plus end" evidence=IDA

GO:0042438 "melanin biosynthetic process" evidence=IMP

GO:0042470 "melanosome" evidence=IDA

GO:0042476 "odontogenesis" evidence=IDA

GO:0042552 "myelination" evidence=IMP

GO:0042640 "anagen" evidence=IMP

GO:0042641 "actomyosin" evidence=IDA

GO:0042642 "actomyosin, myosin complex part" evidence=ISO

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=IMP

GO:0043005 "neuron projection" evidence=ISO

GO:0043008 "ATP-dependent protein binding" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO;IDA

GO:0043473 "pigmentation" evidence=ISA;IMP

GO:0046982 "protein heterodimerization activity" evidence=ISO

GO:0046983 "protein dimerization activity" evidence=ISO

GO:0048066 "developmental pigmentation" evidence=IMP

GO:0048306 "calcium-dependent protein binding" evidence=ISO

GO:0050808 "synapse organization" evidence=IMP

GO:0050885 "neuromuscular process controlling balance" evidence=IMP

GO:0051643 "endoplasmic reticulum localization" evidence=IMP

GO:0072659 "protein localization to plasma membrane" evidence=IMP

RGD|3143 Myo5a "myosin VA" [Rattus norvegicus (taxid:10116)]

 Score = 158 (60.7 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query:    69 IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKI 128
             IFRIL+ ILHLGN+ F+     D+DSC+I P    L  FCD++  +D +E    L HRK+
Sbjct:   325 IFRILAGILHLGNVGFASR---DSDSCTIPPKHEPLIIFCDLM-GVDYEEMCHWLCHRKL 380

Query:   129 TTMQESFNKPMS 140
              T  E++ KP+S
Sbjct:   381 ATATETYIKPIS 392

GO:0000146 "microfilament motor activity" evidence=ISO;IDA

GO:0000149 "SNARE binding" evidence=IPI

GO:0001726 "ruffle" evidence=ISO

GO:0001750 "photoreceptor outer segment" evidence=ISO

GO:0003774 "motor activity" evidence=IEA;ISO;IMP

GO:0003779 "actin binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005516 "calmodulin binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005882 "intermediate filament" evidence=ISO

GO:0006582 "melanin metabolic process" evidence=ISO

GO:0006887 "exocytosis" evidence=ISO

GO:0007268 "synaptic transmission" evidence=ISO

GO:0007601 "visual perception" evidence=ISO

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0008152 "metabolic process" evidence=ISO

GO:0016192 "vesicle-mediated transport" evidence=ISO;ISS

GO:0016459 "myosin complex" evidence=IEA;ISO

GO:0017075 "syntaxin-1 binding" evidence=IPI

GO:0017137 "Rab GTPase binding" evidence=ISO

GO:0017157 "regulation of exocytosis" evidence=IMP

GO:0030048 "actin filament-based movement" evidence=ISO;IDA

GO:0030050 "vesicle transport along actin filament" evidence=IMP

GO:0030073 "insulin secretion" evidence=ISO

GO:0030141 "secretory granule" evidence=ISO;IDA;TAS

GO:0030318 "melanocyte differentiation" evidence=ISO

GO:0030424 "axon" evidence=IDA

GO:0031585 "regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity" evidence=ISO

GO:0031987 "locomotion involved in locomotory behavior" evidence=ISO

GO:0032252 "secretory granule localization" evidence=ISO;IMP;IDA

GO:0032400 "melanosome localization" evidence=ISO

GO:0032402 "melanosome transport" evidence=ISO

GO:0032593 "insulin-responsive compartment" evidence=ISO;ISS

GO:0032869 "cellular response to insulin stimulus" evidence=ISO;ISS

GO:0035371 "microtubule plus end" evidence=ISO

GO:0042438 "melanin biosynthetic process" evidence=ISO

GO:0042470 "melanosome" evidence=ISO

GO:0042476 "odontogenesis" evidence=ISO

GO:0042552 "myelination" evidence=ISO

GO:0042640 "anagen" evidence=ISO

GO:0042641 "actomyosin" evidence=ISO

GO:0042642 "actomyosin, myosin complex part" evidence=IDA

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=ISO

GO:0043005 "neuron projection" evidence=IDA

GO:0043008 "ATP-dependent protein binding" evidence=IPI

GO:0043025 "neuronal cell body" evidence=ISO;IDA

GO:0043473 "pigmentation" evidence=ISO;IMP

GO:0046982 "protein heterodimerization activity" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IMP

GO:0048066 "developmental pigmentation" evidence=ISO

GO:0048306 "calcium-dependent protein binding" evidence=IPI

GO:0050808 "synapse organization" evidence=ISO

GO:0050885 "neuromuscular process controlling balance" evidence=ISO

GO:0051643 "endoplasmic reticulum localization" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	144
cd01380	691	cd01380, MYSc_type_V, Myosin motor domain, type V	2e-18
smart00242	677	smart00242, MYSc, Myosin	4e-16
cd01378	674	cd01378, MYSc_type_I, Myosin motor domain, type I	2e-12
cd00124	679	cd00124, MYSc, Myosin motor domain	5e-12
cd01384	674	cd01384, MYSc_type_XI, Myosin motor domain, plant-	2e-11
pfam00063	679	pfam00063, Myosin_head, Myosin head (motor domain)	3e-10
COG5022	1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	1e-09
cd01384	674	cd01384, MYSc_type_XI, Myosin motor domain, plant-	1e-08
cd01387	677	cd01387, MYSc_type_XV, Myosin motor domain, type X	4e-07
cd01380	691	cd01380, MYSc_type_V, Myosin motor domain, type V	7e-07
cd01381	671	cd01381, MYSc_type_VII, Myosin motor domain, type	1e-06
cd01382	717	cd01382, MYSc_type_VI, Myosin motor domain, type V	7e-06
cd01387	677	cd01387, MYSc_type_XV, Myosin motor domain, type X	2e-05
cd01377	693	cd01377, MYSc_type_II, Myosin motor domain, type I	4e-05
cd01377	693	cd01377, MYSc_type_II, Myosin motor domain, type I	8e-05
PTZ00014	821	PTZ00014, PTZ00014, myosin-A; Provisional	2e-04
smart00242	677	smart00242, MYSc, Myosin	5e-04
PTZ00014	821	PTZ00014, PTZ00014, myosin-A; Provisional	0.003
cd01385	692	cd01385, MYSc_type_IX, Myosin motor domain, type I	0.003

>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins

 Score = 80.4 bits (199), Expect = 2e-18
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
            S   Q  IF++L+++LHLGNI+         DS SI+P   +L   C++L  +D  + R
Sbjct: 251 ISEEQQMDIFKLLAALLHLGNIEI---EATRNDSSSISPKDENLQIACELL-GVDASDLR 306

Query: 121 RCLTHRKITTMQESFNKPMSVFE 143
           + L  R+I T  E   KP++  +
Sbjct: 307 KWLVKRQIVTRSEKIVKPLTKEQ 329

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 691

>gnl|CDD|214580 smart00242, MYSc, Myosin

 Score = 73.7 bits (182), Expect = 4e-16
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +QE IF+IL++ILHLGNI+F  G + +  S        S AA    L  +D +E  
Sbjct: 254 FSEEEQESIFKILAAILHLGNIEFEEGRNDNAASTVKDKEELSNAAE---LLGVDPEELE 310

Query: 121 RCLTHRKITTMQESFNKPMSVFE 143
           + LT RKI T  E   KP++V +
Sbjct: 311 KALTKRKIKTGGEVITKPLNVEQ 333

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin. Length = 677

>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +Q+ IFRI+++ILHLGN+QF+    G     +   S   +  F   L  +D  E  
Sbjct: 248 FSEDEQDEIFRIVAAILHLGNVQFAENGDG-----AAVISDKDVLDFAAYLLGVDPSELE 302

Query: 121 RCLTHRKITT----MQESFNKPMSV 141
           + LT R I T      E ++ P++V
Sbjct: 303 KALTSRTIETGGGGRGEVYDVPLNV 327

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain

 Score = 61.9 bits (151), Expect = 5e-12
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  + E IFRIL++ILHLGNI+F        ++  +  +   L+   ++L  +D +E  
Sbjct: 246 FSEEEIESIFRILAAILHLGNIEFKSVGGEGQEAAEVKNTE-VLSKAAELL-GLDPEELE 303

Query: 121 RCLTHRKITTMQESFNKPMSV 141
             LT++      E    P++ 
Sbjct: 304 EALTYKVTKVGGEVITIPLTK 324

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 679

>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

 Score = 60.1 bits (146), Expect = 2e-11
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 62  SALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAA-FCDILYNIDRDEFR 120
           S  +Q+ IFR++++ILHLGNI+F+ G   + DS  +              L   D     
Sbjct: 251 SEEEQDAIFRVVAAILHLGNIEFAKGE--EIDSSVLKDEKSEFHLKTAAELLMCDEKALE 308

Query: 121 RCLTHRKITTMQESFNKPMSVF 142
             L  R + T +E   KP+   
Sbjct: 309 DALCKRVMVTPEEVITKPLDPD 330

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain)

 Score = 56.5 bits (137), Expect = 3e-10
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 16/87 (18%)

Query: 61  FSALDQEVIFRILSSILHLGNIQF------SGGSHGDTDSCSIAPSSGSLAAFCDILYNI 114
           F+  +Q  IFR+L++ILHLGNI+F            DT+   I             L  +
Sbjct: 248 FTDEEQRSIFRVLAAILHLGNIKFKQDQNEEQAVVEDTEELEIIAG----------LLGV 297

Query: 115 DRDEFRRCLTHRKITTMQESFNKPMSV 141
           D +E  + L  R+I T +E+  KP +V
Sbjct: 298 DPEELEKALLKRRIKTGRETVTKPQNV 324

Length = 679

>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q+ IF+IL++ILH+GNI+F      D +  +I   +  L   C +L  ID   F + L  
Sbjct: 320 QDQIFKILAAILHIGNIEFK----EDRNGAAIFSDNSVLDKACYLL-GIDPSLFVKWLVK 374

Query: 126 RKITTMQESFNKPMS 140
           R+I T  E    P++
Sbjct: 375 RQIKTGGEWIVVPLN 389

Length = 1463

>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSIL 77
           G S  +Q+ IFR++++ILHLGNI+F+ G   + DS        E   +  + +L
Sbjct: 249 GISEEEQDAIFRVVAAILHLGNIEFAKGE--EIDSSVLKDEKSEFHLKTAAELL 300

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS+ DQ+ IFRIL+SILHLGN+ F        +  S+  S+  + A  ++L  I  +  +
Sbjct: 246 FSSEDQDSIFRILASILHLGNVYFEKRETDAQEVASVV-SAREIQAVAELL-QISPEGLQ 303

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           + +T +   T +E    P++V
Sbjct: 304 KAITFKVTETRREKIFTPLTV 324

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677

>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins

 Score = 46.9 bits (112), Expect = 7e-07
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          EPAVL+NL+VRF Q   IYTY G
Sbjct: 13 EPAVLHNLRVRFIQKQ-IYTYSG 34

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 691

>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 65  DQEV--IFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRC 122
           DQE+  IF++L++ILH+GN++F      +  +C +  +  +L     +L  +   +    
Sbjct: 247 DQEIWEIFKLLAAILHIGNLRFEATEVDNLAACEVDDTP-NLQRVAQLL-GVPIQDLMDA 304

Query: 123 LTHRKITTMQESFNKPMSV 141
           LT R I T  E+   P+S 
Sbjct: 305 LTSRTIFTRGETVVTPLSR 323

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 671

>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 65  DQEV--IFRILSSILHLGNIQFSGGSHGDTD-SCSIAPSSGSLAAFCDILYNIDRDEFRR 121
           D E   +FR+++ +LHLGNI F     G T   C++   S     +C  L  +D+D+ R 
Sbjct: 278 DTEKLDLFRVVAGVLHLGNIDFEEA--GSTSGGCNVKNQSEQSLEYCAELLGLDQDDLRV 335

Query: 122 CLTHRKITT 130
            LT R + T
Sbjct: 336 SLTTRVMLT 344

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 717

>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 18/25 (72%), Positives = 22/25 (88%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQF 48
           GFS+ DQ+ IFRIL+SILHLGN+ F
Sbjct: 245 GFSSEDQDSIFRILASILHLGNVYF 269

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677

>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins

 Score = 41.8 bits (99), Expect = 4e-05
 Identities = 14/25 (56%), Positives = 21/25 (84%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQF 48
           GFS  ++  IF+I+++ILHLGNI+F
Sbjct: 259 GFSDEEKNSIFKIVAAILHLGNIKF 283

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 693

>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins

 Score = 41.0 bits (97), Expect = 8e-05
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  ++  IF+I+++ILHLGNI+F      +    +    +         L  ++  +  
Sbjct: 260 FSDEEKNSIFKIVAAILHLGNIKFKQRQREEQ---AELDGTEEADKAAH-LLGVNSADLL 315

Query: 121 RCLTHRKI 128
           + L H +I
Sbjct: 316 KALLHPRI 323

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 693

>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 57  DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAF---CDILYN 113
           DS   S    E IF ILS +L LGN++  G   G     + A S  SL  F   C++L+ 
Sbjct: 339 DSMGLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAA-AISDESLEVFNEACELLF- 396

Query: 114 IDRDEFRRCLTHRKITT 130
           +D +  ++ LT  K+T 
Sbjct: 397 LDYESLKKELTV-KVTY 412

Length = 821

>gnl|CDD|214580 smart00242, MYSc, Myosin

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          EPAVL+NL+ R+   + IYTY G
Sbjct: 19 EPAVLHNLKKRY-LKDLIYTYIG 40

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin. Length = 677

>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 17/56 (30%), Positives = 25/56 (44%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHL 79
           G S    E IF ILS +L LGN++  G   G     +  + +   +F     +L L
Sbjct: 342 GLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDESLEVFNEACELLFL 397

Length = 821

>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins

 Score = 36.4 bits (84), Expect = 0.003
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 57  DSCSFSALDQEVIFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSS--GSLAAFCDILY 112
           +   F A  Q+ IF +LS++L LGN+ +      H D +S  +        L+     L 
Sbjct: 252 EMVGFLAATQKQIFAVLSAVLLLGNVTYKKRATYHRD-ESLEVGNPEVVDLLSQ----LL 306

Query: 113 NIDRDEFRRCLTHRKITTMQESFNKPMSVFE 143
            + R+     LT ++  T+ E+   P S+ E
Sbjct: 307 KVKRETLMEALTKKRTVTVNETLILPYSLSE 337

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 692

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
COG5022	1463	Myosin heavy chain [Cytoskeleton]	99.92
cd01381	671	MYSc_type_VII Myosin motor domain, type VII myosin	99.89
PTZ00014	821	myosin-A; Provisional	99.89
cd01377	693	MYSc_type_II Myosin motor domain, type II myosins.	99.89
cd01380	691	MYSc_type_V Myosin motor domain, type V myosins. M	99.89
cd01383	677	MYSc_type_VIII Myosin motor domain, plant-specific	99.88
cd01387	677	MYSc_type_XV Myosin motor domain, type XV myosins.	99.87
cd01384	674	MYSc_type_XI Myosin motor domain, plant-specific t	99.87
cd01385	692	MYSc_type_IX Myosin motor domain, type IX myosins.	99.87
cd01378	674	MYSc_type_I Myosin motor domain, type I myosins. M	99.86
cd01379	653	MYSc_type_III Myosin motor domain, type III myosin	99.85
smart00242	677	MYSc Myosin. Large ATPases. ATPase; molecular moto	99.85
KOG0164|consensus	1001		99.85
cd00124	679	MYSc Myosin motor domain. This catalytic (head) do	99.85
cd01382	717	MYSc_type_VI Myosin motor domain, type VI myosins.	99.84
KOG0162|consensus	1106		99.81
PF00063	689	Myosin_head: Myosin head (motor domain); InterPro:	99.8
KOG0163|consensus	1259		99.8
cd01386	767	MYSc_type_XVIII Myosin motor domain, type XVIII my	99.77
KOG0160|consensus	862		99.73
KOG0161|consensus	1930		99.66
KOG4229|consensus	1062		99.24
COG5022	1463	Myosin heavy chain [Cytoskeleton]	98.91
cd01381	671	MYSc_type_VII Myosin motor domain, type VII myosin	98.9
PTZ00014	821	myosin-A; Provisional	98.89
cd01385	692	MYSc_type_IX Myosin motor domain, type IX myosins.	98.89
cd01384	674	MYSc_type_XI Myosin motor domain, plant-specific t	98.87
cd00124	679	MYSc Myosin motor domain. This catalytic (head) do	98.87
smart00242	677	MYSc Myosin. Large ATPases. ATPase; molecular moto	98.87
cd01383	677	MYSc_type_VIII Myosin motor domain, plant-specific	98.86
cd01380	691	MYSc_type_V Myosin motor domain, type V myosins. M	98.85
cd01379	653	MYSc_type_III Myosin motor domain, type III myosin	98.85
cd01377	693	MYSc_type_II Myosin motor domain, type II myosins.	98.85
cd01387	677	MYSc_type_XV Myosin motor domain, type XV myosins.	98.82
cd01378	674	MYSc_type_I Myosin motor domain, type I myosins. M	98.81
cd01386	767	MYSc_type_XVIII Myosin motor domain, type XVIII my	98.81
cd01382	717	MYSc_type_VI Myosin motor domain, type VI myosins.	98.75
PF00063	689	Myosin_head: Myosin head (motor domain); InterPro:	98.69
KOG0164|consensus	1001		98.67
KOG0162|consensus	1106		98.63
KOG0161|consensus	1930		98.34
KOG0160|consensus	862		98.13
KOG0163|consensus	1259		98.1
KOG4229|consensus	1062		97.24

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=99.92  E-value=1.2e-26  Score=206.13  Aligned_cols=137  Identities=27%  Similarity=0.368  Sum_probs=113.2

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCCh---------------hcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFSA---------------LDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~~---------------~e~-~~if~~la~i--------L~l----------   43 (144)
                      .|+||||+||||+++++++     |+|...               .|+ +|||+++.+.        +++          
T Consensus       208 kTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~  287 (1463)
T COG5022         208 KTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLS  287 (1463)
T ss_pred             cccccCCcccccceEEEEECCCCceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHh
Confidence            5999999999999999975     566653               244 7999877554        222          


Q ss_pred             -C-CeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 -G-NIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 -G-ni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                       | +..+.+.++.+++        .+||+.+++..||++||+|||||||+|.+..   ++.+.+ ++.+.++.+|.|| |
T Consensus       288 ~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r---~g~a~~-~~~~~~~~~c~LL-g  362 (1463)
T COG5022         288 QGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDR---NGAAIF-SDNSVLDKACYLL-G  362 (1463)
T ss_pred             hcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeecc---cchhhc-CCchHHHHHHHHh-C
Confidence             3 4456666665544        6999999999999999999999999999863   444444 7889999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ||++.|.+||++|+++++||+|.+|++..||
T Consensus       363 Id~~~f~k~lvk~~ikt~~E~i~~~~n~~QA  393 (1463)
T COG5022         363 IDPSLFVKWLVKRQIKTGGEWIVVPLNLEQA  393 (1463)
T ss_pred             CCHHHHHHHHHHhHhhcCceEEEecCCHHHH
Confidence            9999999999999999999999999999885

>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins

Probab=99.89  E-value=1.6e-24  Score=186.43  Aligned_cols=140  Identities=22%  Similarity=0.323  Sum_probs=109.0

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      -|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |+|++.       
T Consensus       138 kT~~N~NSSRFGK~~~l~F~~~g~i~Ga~i~~yLLEksRV~~q~~gERnfHIFYqLl~g~~~~~~~~l~L~~~~~y~yL~  217 (671)
T cd01381         138 KTIRNDNSSRFGKYIDIHFNKRGAIEGAKIEQYLLEKSRIVRQARDERNYHIFYCMLAGLSTDEKERLKLGEASDYHYLA  217 (671)
T ss_pred             ccCCCCCccccceeEEEEECCCCcEEEEEEEEEeccCCceeecCCCCCcHHHHHHHHcCCCHHHHHHcCCCChhhceeec
Confidence            4899999999999988854     34443               3344 7999877653        334321       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++.+.+        .+||+++++..||++|||||||||++|.....++.+.|.+ .+.+.++.+|+|| |
T Consensus       218 ~~~~~~~~~~dD~~~f~~~~~al~~lG~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~i-~~~~~l~~~a~LL-g  295 (671)
T cd01381         218 QGGCITCEGRDDAKDFADIRSAMKVLMFTDQEIWEIFKLLAAILHIGNLRFEATEVDNLAACEV-DDTPNLQRVAQLL-G  295 (671)
T ss_pred             CCCCccCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeeccCCCCCceee-CChHHHHHHHHHh-C
Confidence                 11111111111        5999999999999999999999999998765334456777 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.++||.+.+|++++|+
T Consensus       296 v~~~~L~~~lt~~~~~~~~e~i~~~~~~~qA  326 (671)
T cd01381         296 VPIQDLMDALTSRTIFTRGETVVTPLSREQA  326 (671)
T ss_pred             CCHHHHhhhhceEEEEeCCceEEecCCHHHH
Confidence            9999999999999999999999999998874

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr

>PTZ00014 myosin-A; Provisional

Probab=99.89  E-value=2.3e-24  Score=188.15  Aligned_cols=141  Identities=25%  Similarity=0.268  Sum_probs=107.5

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCC--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGN--------   45 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGn--------   45 (144)
                      -|+||||||||++++++.+     ++|..               .+|+ +|||+.+.+.        |+|.+        
T Consensus       237 KT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLl~G~~~~~~~~l~L~~~~~y~yL~  316 (821)
T PTZ00014        237 KTIRNNNSSRFGRFMQLQLGEEGGIRYGSIVAFLLEKSRVVTQEDDERSYHIFYQLLKGANDEMKEKYKLKSLEEYKYIN  316 (821)
T ss_pred             CcCCCCCcCcceeEEEEEEcCCCcEeeEEEEEEeccCceeeecCCCCCCEeHHHHHHhCCCHHHHHHcCCCChHhccccC
Confidence            4899999999999998864     34443               3444 6999877653        33422        


Q ss_pred             ---eeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCC-CCCcceecC-ChhHHHHHHHHhc
Q psy9984          46 ---IQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHG-DTDSCSIAP-SSGSLAAFCDILY  112 (144)
Q Consensus        46 ---i~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~-~~~~~~v~~-~~~~l~~~a~LL~  112 (144)
                         ..+.+.++.+.+        .+||+++++..||+++|||||||||+|.....+ ..+.+.+.. +.+.++.+|+|| 
T Consensus       317 ~~~~~~~~~dD~~~f~~~~~A~~~lg~s~~e~~~If~ilaaILhLGNi~F~~~~~~~~~~~~~i~~~~~~~l~~~a~LL-  395 (821)
T PTZ00014        317 PKCLDVPGIDDVKDFEEVMESFDSMGLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDESLEVFNEACELL-  395 (821)
T ss_pred             CCCccCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeccccCCCCCceeccCCCHHHHHHHHHHh-
Confidence               222222332222        699999999999999999999999999875422 235566632 235899999999 


Q ss_pred             CCCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         113 NIDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       113 gv~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ||++++|.++||+|++.++||.+.+|++++|+
T Consensus       396 gv~~~~L~~~L~~~~~~~~~e~i~~~~~~~qA  427 (821)
T PTZ00014        396 FLDYESLKKELTVKVTYAGNQKIEGPWSKDES  427 (821)
T ss_pred             CCCHHHHHHHhhceEEEeCCeeEecCCCHHHH
Confidence            99999999999999999999999999999874

>cd01377 MYSc_type_II Myosin motor domain, type II myosins

Probab=99.89  E-value=3.3e-24  Score=185.09  Aligned_cols=138  Identities=23%  Similarity=0.308  Sum_probs=107.7

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      -|++|||+|||+++.++++     ++|.+               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       153 kT~rN~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~q~~gERNfHIFYqLl~G~~~~~~~~l~L~~~~~~y~yL  232 (693)
T cd01377         153 KTVRNDNSSRFGKFIRIHFGNTGKIAGADIETYLLEKSRVVFQASGERNYHIFYQLLSGADPELKSMLLLTGNPNDYRYL  232 (693)
T ss_pred             ccCCCCCccccceeEEEEECCCCCEEEEEEEEEecccCceeecCCCCCcHHHHHHHHcCCCHHHHHHcCCCCchhcCeee
Confidence            4899999999999988864     34444               3455 7999877654        334322       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++...+        .+||+++++..||++||||||||||+|....  +.+.+.+ .+.+.+..+|+|| |
T Consensus       233 ~~~~~~~~~~~d~~~f~~~~~al~~lG~~~~e~~~i~~iLaaILhLGni~F~~~~--~~~~~~~-~~~~~l~~~a~LL-g  308 (693)
T cd01377         233 SQGELTIPGVDDAEEFKLTDEAFDILGFSDEEKNSIFKIVAAILHLGNIKFKQRQ--REEQAEL-DGTEEADKAAHLL-G  308 (693)
T ss_pred             CCCCccCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecC--CCCcccc-CChHHHHHHHHHh-C
Confidence                 11111111111        5999999999999999999999999998764  3555666 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+.+|++++|+
T Consensus       309 v~~~~L~~~l~~~~~~~~~e~i~~~~~~~~A  339 (693)
T cd01377         309 VNSADLLKALLHPRIKVGREWVTKGQNVEQV  339 (693)
T ss_pred             CCHHHHHHHhcceEEEECCeeEeeCCCHHHH
Confidence            9999999999999999999999999998874

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro

>cd01380 MYSc_type_V Myosin motor domain, type V myosins

Probab=99.89  E-value=5.3e-24  Score=183.78  Aligned_cols=138  Identities=29%  Similarity=0.434  Sum_probs=107.1

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      .|++|||+|||+++.++.+     ++|..               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       144 kT~~N~NSSRFGK~~~l~f~~~g~i~Ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g~~~~~~~~l~L~~~~~y~yl~  223 (691)
T cd01380         144 KTTRNDNSSRFGKYIQILFDKRGRIIGANMRTYLLEKSRVVFQAPGERNYHIFYQLCAGAPSQELKELHLGHADKFNYLN  223 (691)
T ss_pred             CCCCCCCccccceEEEEEECCCCCEEEEEEEEeeccccceeecCCCCChhHHHHHHHhCCCHHHHHHhCCCCHHHCcccc
Confidence            5899999999999988864     34433               3444 7999877654        444332       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++...+        .+||+++++..||++||||||||||+|....   .+.+.+..+.+.++.+|+|| |
T Consensus       224 ~~~~~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~I~~iLaaILhLGni~F~~~~---~~~~~~~~~~~~l~~~a~LL-g  299 (691)
T cd01380         224 QGGAPTIEGVDDAEDFNATVQALTLLGISEEQQMDIFKLLAALLHLGNIEIEATR---NDSSSISPKDENLQIACELL-G  299 (691)
T ss_pred             CCCCccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccC---CccceecCChHHHHHHHHHh-C
Confidence                 11111221111        5999999999999999999999999998763   44444545677899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|++|++.++||.+.+|++++|+
T Consensus       300 v~~~~L~~~l~~~~~~~~~e~i~~~~~~~qA  330 (691)
T cd01380         300 VDASDLRKWLVKRQIVTRSEKIVKPLTKEQA  330 (691)
T ss_pred             CCHHHHHHHHHhCEEEECCeeEEecCCHHHH
Confidence            9999999999999999999999999999874

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act

>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

Probab=99.88  E-value=7.2e-24  Score=182.41  Aligned_cols=138  Identities=18%  Similarity=0.253  Sum_probs=106.3

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      .|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       143 kT~~N~NSSRFGK~~~l~f~~~g~i~ga~i~~yLLEksRv~~q~~gErNfHIFYqLl~g~~~~~~~~l~L~~~~~y~yL~  222 (677)
T cd01383         143 KTSRNDNSSRFGKLIEIHFSETGKISGAKIQTFLLEKSRVVQCARGERSYHIFYQLCAGAPPALKEKLNLKSASEYKYLK  222 (677)
T ss_pred             ccCCCCCcCccceeEEEEECCCCcEEEEEEEEEecCCCceeccCCCCchhHHHHHHHcCCCHHHHHHhCCCCHHHCceec
Confidence            4899999999999988754     34433               3455 6999777653        344332       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++.+.+        .+||+++++..||++||||||||||+|....  +++.+.+ .+++.+..+|+|| |
T Consensus       223 ~~~~~~~~~~dd~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGNi~F~~~~--~~~~~~~-~~~~~l~~~a~LL-g  298 (677)
T cd01383         223 QSCCYSINGVDDAQRFHTLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVID--NENHVEP-VADEALSTAAKLI-G  298 (677)
T ss_pred             CCCcccCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecC--CCccccc-CChHHHHHHHHHh-C
Confidence                 11111121111        5999999999999999999999999998753  3334455 4677899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.++||.+.+|++++|+
T Consensus       299 v~~~~L~~~l~~~~~~~~~e~~~~~~~~~qa  329 (677)
T cd01383         299 CNIEDLMLALSTRKMHVNNDNIVQKLTLQQA  329 (677)
T ss_pred             CCHHHHHHHhhhcEEEeCCceEeecCCHHHH
Confidence            9999999999999999999999999999874

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f

>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins

Probab=99.87  E-value=1.8e-23  Score=179.99  Aligned_cols=140  Identities=28%  Similarity=0.401  Sum_probs=106.6

Q ss_pred             cchhcccHHHHHHHHHHHH----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI--------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~----i~G~~---------------~~e~-~~if~~la~i--------L~lGni--------   46 (144)
                      .|++|||+|||+++.++++    ++|..               .+|+ +|||+.+.+.        |+|.+.        
T Consensus       140 kT~~N~NSSRfGk~~~l~f~~g~i~Ga~i~~yLLEksRvv~q~~gErnfHIFYqll~g~~~~~~~~~~L~~~~~y~yL~~  219 (677)
T cd01387         140 KTVRNDNSSRFGKFVEIFLEGGVIVGAITSQYLLEKSRIVFQAKNERNYHIFYELLAGLPAQLRQAFSLQEAETYYYLNQ  219 (677)
T ss_pred             CCCCCCCccccceEEEEEecCCcEeEEEEEEEecCCCceeecCCCCchHHHHHHHHhCCCHHHHHHhcCCCHHhCchhcC
Confidence            4899999999999988764    33433               2344 7999766543        333221        


Q ss_pred             ----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCC
Q psy9984          47 ----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNI  114 (144)
Q Consensus        47 ----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv  114 (144)
                          ...+.++.+.+        .+||+.+++..||++|||||||||++|.....++.+.+.+ .+++.++.+|+|| ||
T Consensus       220 ~~~~~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~-~~~~~l~~~a~LL-gv  297 (677)
T cd01387         220 GGNCEIAGKSDADDFRRLLAAMEVLGFSSEDQDSIFRILASILHLGNVYFEKRETDAQEVASV-VSAREIQAVAELL-QI  297 (677)
T ss_pred             CCcccCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeEEeeccCCCCccccc-CCHHHHHHHHHHh-CC
Confidence                11111111111        5999999999999999999999999998764323445666 5778999999999 99


Q ss_pred             CHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         115 DRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       115 ~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++++|.++||+|++.++||.+.+|++++|+
T Consensus       298 ~~~~L~~~lt~~~~~~~~e~i~~~~~~~~a  327 (677)
T cd01387         298 SPEGLQKAITFKVTETRREKIFTPLTVESA  327 (677)
T ss_pred             CHHHHHHHhccCeEEeCCceEeccCCHHHH
Confidence            999999999999999999999999999874

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus

>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

Probab=99.87  E-value=4.1e-23  Score=177.71  Aligned_cols=139  Identities=27%  Similarity=0.389  Sum_probs=106.4

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH-------hhcCCe--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI-------LHLGNI--------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i-------L~lGni--------   46 (144)
                      .|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.       |+|.+.        
T Consensus       144 kT~~N~NSSRFGK~~~l~f~~~g~i~Ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g~~~~~~~l~L~~~~~y~yL~~  223 (674)
T cd01384         144 KTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLERSRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQ  223 (674)
T ss_pred             CCCCCCCcchhheeEEEEECCCCcEEEEEEEEEecccCceeecCCCCCchhHHHHHHcCCHHHHHHcCCCChHhCccccC
Confidence            5899999999999988854     34443               3455 7999877643       334332        


Q ss_pred             ----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecC--ChhHHHHHHHHhc
Q psy9984          47 ----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAP--SSGSLAAFCDILY  112 (144)
Q Consensus        47 ----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~--~~~~l~~~a~LL~  112 (144)
                          ...+.++...+        .+||+++++..||++|||||||||++|....  +.+++.+..  +.+.+..+|+|| 
T Consensus       224 ~~~~~~~~~~D~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~--~~~~~~~~~~~~~~~l~~~a~LL-  300 (674)
T cd01384         224 SNCFELDGVDDAEEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGE--EIDSSVLKDEKSEFHLKTAAELL-  300 (674)
T ss_pred             CCCccccccchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccC--CCCcccccCcccHHHHHHHHHHh-
Confidence                11111121111        5999999999999999999999999998764  345565533  247899999999 


Q ss_pred             CCCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         113 NIDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       113 gv~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ||++++|.++|++|++.++||.+.+|++++|+
T Consensus       301 gv~~~~L~~~L~~~~~~~~~e~i~~~~~~~~a  332 (674)
T cd01384         301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSA  332 (674)
T ss_pred             CCCHHHHHHHhcccEEEeCCceEEecCCHHHH
Confidence            99999999999999999999999999998874

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins

Probab=99.87  E-value=3.2e-23  Score=178.92  Aligned_cols=140  Identities=21%  Similarity=0.283  Sum_probs=106.6

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCC--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGN--------   45 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGn--------   45 (144)
                      -|++|||+|||+++.++.+     ++|..               .+|+ +|||+.+.+.        +++..        
T Consensus       149 kT~~N~NSSRFGK~i~l~F~~~g~i~Ga~i~~yLLEksRV~~q~~gERNfHIFYqll~G~~~~~~~~~~l~~~~~y~yL~  228 (692)
T cd01385         149 KTAHNNNSSRFGKFIQVNYRENGMVRGAVVEKYLLEKSRIVSQEKDERNYHVFYYLLLGASEEERKQEFLLKQPDYFYLN  228 (692)
T ss_pred             ccCCCCCccccceeEEEEECCCCCEEEEEEEEeecccceeeecCCCCchhHHHHHHHcCCCHHHHHHhcCCChhcCCeeC
Confidence            4899999999999988854     34444               2344 7999777553        22321        


Q ss_pred             ---eeee-cCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCC-CCCCcceecCChhHHHHHHHHhc
Q psy9984          46 ---IQFS-GGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSH-GDTDSCSIAPSSGSLAAFCDILY  112 (144)
Q Consensus        46 ---i~f~-~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~-~~~~~~~v~~~~~~l~~~a~LL~  112 (144)
                         +... +.++...+        .+||++++++.||++||||||||||+|.+... +.++.+.+ .+.+.++.+|+|| 
T Consensus       229 ~~~~~~~~~~dd~~~f~~~~~al~~lG~~~~~~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~-~~~~~l~~~a~LL-  306 (692)
T cd01385         229 QHNLKIEDGEDEKHEFERLKQAMEMVGFLAATQKQIFAVLSAVLLLGNVTYKKRATYHRDESLEV-GNPEVVDLLSQLL-  306 (692)
T ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeeecccCCCCCceec-CCHHHHHHHHHHh-
Confidence               1111 11111111        58999999999999999999999999987531 23455666 6788999999999 


Q ss_pred             CCCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         113 NIDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       113 gv~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ||++++|.++||+|++.++||.+++|++++|+
T Consensus       307 gv~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa  338 (692)
T cd01385         307 KVKRETLMEALTKKRTVTVNETLILPYSLSEA  338 (692)
T ss_pred             CCCHHHHHHHhccCeEEeCCCeEEecCCHHHH
Confidence            99999999999999999999999999999874

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea

>cd01378 MYSc_type_I Myosin motor domain, type I myosins

Probab=99.86  E-value=6.7e-23  Score=176.54  Aligned_cols=137  Identities=28%  Similarity=0.340  Sum_probs=105.7

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      -|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       141 kT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~yLLEksRVv~~~~gErnfHIFYqll~g~~~~~~~~l~L~~~~~y~yL~  220 (674)
T cd01378         141 KTLRNNNSSRFGKYMEIQFDFKGDPVGGKITNYLLEKSRVVSQNKGERNFHIFYQLLAGASEQLLRELGLQKPEYYYYLN  220 (674)
T ss_pred             ccCCCCCcchhheeEEEEECCCCCEeeEEEEEeecCCCceeecCCCCchhHHHHHHHcCCCHHHHHHhCCCChhhCeeec
Confidence            4899999999999988753     34433               3455 6999877553        333221       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++...+        .+||+++++..||++||||||||||+|....   ++.+.+ .+.+.++.+|+|| |
T Consensus       221 ~~~~~~~~~~~d~~~f~~~~~al~~lG~s~~e~~~i~~ilaaILhLGni~f~~~~---~~~~~~-~~~~~l~~~a~LL-g  295 (674)
T cd01378         221 QSQCYTVDGIDDKKDFKETQNAMKVIGFSEDEQDEIFRIVAAILHLGNVQFAENG---DGAAVI-SDKDVLDFAAYLL-G  295 (674)
T ss_pred             CCCccCCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeccC---CCcccc-CChHHHHHHHHHc-C
Confidence                 11111121111        5999999999999999999999999998763   334566 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCC----cEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQ----ESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~g----e~i~~~ls~~q~  144 (144)
                      |++++|.++|++|++.++|    |.+.+|++++|+
T Consensus       296 v~~~~L~~~l~~~~~~~~~~~~~e~i~~~~~~~~a  330 (674)
T cd01378         296 VDPSELEKALTSRTIETGGGGRGEVYDVPLNVEQA  330 (674)
T ss_pred             CCHHHHHHHhcccEEEeCCCCCceeEEecCCHHHH
Confidence            9999999999999999998    999999999874

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon

>cd01379 MYSc_type_III Myosin motor domain, type III myosins

Probab=99.85  E-value=1.6e-22  Score=173.63  Aligned_cols=140  Identities=21%  Similarity=0.268  Sum_probs=105.9

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH---------hhcCCe------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI---------LHLGNI------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i---------L~lGni------   46 (144)
                      .|++|||+|||+++.++++     ++|.+               .+|+ +|||+.+.+.         +.|.+.      
T Consensus       139 kT~~N~NSSRFGK~i~l~f~~~g~i~Ga~i~~yLLEksRVv~q~~gERNfHIFYqLl~G~~~~~~~~~~~L~~~~~~~yL  218 (653)
T cd01379         139 RTGINDNSSRFGKYLEMKFTRSGAVVGARISEYLLEKSRVVHQAEGEKNFHIFYYIYAGLAEEKKLAEYKLPESKTPRYL  218 (653)
T ss_pred             CcCCCCCcccceeEEEEEECCCCcEEEEEEEEEeccCCceeccCCCCCceeeHHHHHhCCCHHHHHHhcCCCCccccCcc
Confidence            4899999999999988854     34443               3454 6999877543         223221      


Q ss_pred             -----e-eecCCCC----CCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCC-CCCcceecCChhHHHHH
Q psy9984          47 -----Q-FSGGSHG----DTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHG-DTDSCSIAPSSGSLAAF  107 (144)
Q Consensus        47 -----~-f~~~~~~----~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~-~~~~~~v~~~~~~l~~~  107 (144)
                           . ..+..+.    +.+        .+||+++++..||++||||||||||+|.+.... ..+.+.+ .+.+.++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~f~~~~~al~~lg~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~~~~~~i-~~~~~l~~~  297 (653)
T cd01379         219 QNEATRVVQDITSNKFYKDQFEQIEQCFRVIGFTDEEVGSVYRILAAILNLGDIEFGSVASEHQTDKSRV-SNVAALENA  297 (653)
T ss_pred             CCCCccccCCCccchhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEeccccCCCccccc-CCHHHHHHH
Confidence                 1 1111111    111        599999999999999999999999999875321 2344555 678899999


Q ss_pred             HHHhcCCCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         108 CDILYNIDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       108 a~LL~gv~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |+|| ||++++|.++||+|++.++||.+.+|++++|+
T Consensus       298 A~LL-gv~~~~L~~~L~~~~~~~~ge~i~~~~~~~qA  333 (653)
T cd01379         298 ASLL-CIRSDELQEALTSHCVVTRGETIVRHNTVEKA  333 (653)
T ss_pred             HHHh-CCCHHHHHHHhcccEEEeCCceeeecCCHHHH
Confidence            9999 99999999999999999999999999999874

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the

>smart00242 MYSc Myosin

Probab=99.85  E-value=2.3e-22  Score=173.52  Aligned_cols=139  Identities=32%  Similarity=0.421  Sum_probs=105.3

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      .|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       147 kT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g~~~~~~~~l~L~~~~~y~yL~  226 (677)
T smart00242      147 KTVRNNNSSRFGKFIEIHFDAKGKIVGAKIETYLLEKSRVVSQAKGERNYHIFYQLLAGASEELKKELGLKSPEDYRYLN  226 (677)
T ss_pred             ccCCCCCccchheeEEEEECCCCcEeEEEEEEeecCCceEEecCCCCCchHHHHHHHcCCCHHHHHhcCCCChhhCceeC
Confidence            4899999999999988853     44544               2344 7999877554        444332       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++...+        .+||+.+++..||++||||||||||+|....  +++.+....+.+.++.+|+|| |
T Consensus       227 ~~~~~~~~~~~d~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~--~~~~~~~~~~~~~l~~~a~LL-g  303 (677)
T smart00242      227 QGGCLSVDGIDDAEEFKETLNAMRVLGFSEEEQESIFKILAAILHLGNIEFEEGR--NDNAASTVKDKEELENAAELL-G  303 (677)
T ss_pred             CCCCccCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecC--CCCcccccCCHHHHHHHHHHh-C
Confidence                 11111111111        5999999999999999999999999998764  222221236788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|++|++.++||.+.+|++++|+
T Consensus       304 v~~~~L~~~l~~~~~~~~~e~~~~~~~~~~a  334 (677)
T smart00242      304 VDPEELEKALTKRKIKTGGEVITKPLNVEQA  334 (677)
T ss_pred             CCHHHHHHHhcccEEEeCCceEEecCCHHHH
Confidence            9999999999999999999999999998764

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.

>KOG0164|consensus

Probab=99.85  E-value=5.2e-22  Score=167.55  Aligned_cols=136  Identities=26%  Similarity=0.348  Sum_probs=104.9

Q ss_pred             cchhcccHHHHHHHHHH-HHHcCCCh-------------------hcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAI-YTYCGFSA-------------------LDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a-~~i~G~~~-------------------~e~-~~if~~la~i--------L~l----------   43 (144)
                      -|.||||+|||++++.+ |+.-|-+.                   +|+ .|+|+.|-..        |+|          
T Consensus       151 KT~RNdNSSRFGKYMDInFDfKGdPvGG~I~nYLLEKSRVv~Q~~GERNFH~FYQLL~G~~e~~Lr~l~Ler~~~~Y~yl  230 (1001)
T KOG0164|consen  151 KTNRNDNSSRFGKYMDINFDFKGDPVGGHITNYLLEKSRVVKQQPGERNFHIFYQLLRGGEEQLLRQLGLERNPQSYNYL  230 (1001)
T ss_pred             ccccCCchhhhhcceeeeccccCCcccchHhHHHHhhhhhhhcCcCcchHHHHHHHHcCCcHHHHHHhccccCcchhhhh
Confidence            38999999999999887 34444442                   344 6999766432        222          


Q ss_pred             --CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 --GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 --Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                        |.-...+..+..++        ++||+++|++++|+++|+|||||||.|.+.    .|+..+ .+...++.+|+|| +
T Consensus       231 nqg~~~v~sinD~~dfk~V~~Am~vIgFs~eEVe~v~~iiAavLhLGNv~f~~~----ed~~~~-~~~~~l~~~aell-~  304 (1001)
T KOG0164|consen  231 NQGSAKVSSINDASDFKAVQKAMRVIGFSEEEVESVLSIIAAVLHLGNVEFADN----EDSSGI-VNGAQLKYIAELL-S  304 (1001)
T ss_pred             hhhhhhhcccccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceEEeec----Cccccc-chhHHHHHHHHHH-c
Confidence              43333333332222        699999999999999999999999999876    333334 4568899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      +.+++|.++||+|++.++||.+.++++++|+
T Consensus       305 v~~del~~aL~~Rtvaa~~e~v~k~hn~~qA  335 (1001)
T KOG0164|consen  305 VTGDELERALTSRTVAAGGEIVLKQHNVEQA  335 (1001)
T ss_pred             CCHHHHHHHHHHHHHHhccchhhccccHHHH
Confidence            9999999999999999999999999999874

>cd00124 MYSc Myosin motor domain

Probab=99.85  E-value=3.4e-22  Score=172.58  Aligned_cols=140  Identities=26%  Similarity=0.357  Sum_probs=106.1

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCee-e----
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNIQ-F----   48 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni~-f----   48 (144)
                      .|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |+|.+.. +    
T Consensus       139 kT~~N~NSSRfGk~~~l~f~~~g~i~ga~i~~yLLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~l~L~~~~~y~yL~  218 (679)
T cd00124         139 KTVRNNNSSRFGKFIELQFDETGKISGAKITTYLLEKSRVVSQEPGERNFHIFYQLLAGASPEERKKLGLKRPESYRYLN  218 (679)
T ss_pred             ccCCCCCcccceeEEEEEECCCCcEeEEEEEEEEcccceeeccCCCCCchhHHHHHHcCCCHHHHHhcCCCCcccCeeeC
Confidence            5899999999999988753     34433               3455 6999876553        3443321 1    


Q ss_pred             -------ecCCCCCC--------cccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          49 -------SGGSHGDT--------DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        49 -------~~~~~~~~--------~~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                             .+.++...        ..+||+++++..||++||||||||||+|......+.+.+.+ .+.+.++.+|+|| |
T Consensus       219 ~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~f~~~~~~~~~~~~~-~~~~~l~~~a~LL-g  296 (679)
T cd00124         219 QGGCNDVDGIDDAEEFEELKEALKSLGFSEEEIESIFRILAAILHLGNIEFKSVGGEGQEAAEV-KNTEVLSKAAELL-G  296 (679)
T ss_pred             CCCcccCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeeEEecCCCCcceeec-CCHHHHHHHHHHh-C
Confidence                   01111111        15999999999999999999999999998764222222445 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.++||.+.+|++++|+
T Consensus       297 v~~~~L~~~l~~~~~~~~~~~~~~~~~~~~a  327 (679)
T cd00124         297 LDPEELEEALTYKVTKVGGEVITIPLTKEEA  327 (679)
T ss_pred             CCHHHHHHHhhccEEEeCCceEEecCCHHHH
Confidence            9999999999999999999999999998774

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila

>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins

Probab=99.84  E-value=7.6e-22  Score=170.94  Aligned_cols=85  Identities=26%  Similarity=0.514  Sum_probs=73.8

Q ss_pred             ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceec-CChhHHHHHHHHhcCCCHHHHHHHHhhceee-----eC
Q psy9984          58 SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIA-PSSGSLAAFCDILYNIDRDEFRRCLTHRKIT-----TM  131 (144)
Q Consensus        58 ~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~-~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~-----~~  131 (144)
                      .+||+++++..||++||||||||||+|..... ..+.|.+. .+.+.+..+|+|| ||++++|.++||+|++.     ++
T Consensus       273 ~lg~s~~e~~~i~~iLaaILhLGni~F~~~~~-~~~~~~~~~~~~~~l~~~a~LL-gv~~~~L~~~l~~r~~~~~~g~~~  350 (717)
T cd01382         273 KIGLDDTEKLDLFRVVAGVLHLGNIDFEEAGS-TSGGCNVKNQSEQSLEYCAELL-GLDQDDLRVSLTTRVMLTTAGGAK  350 (717)
T ss_pred             HcCCCHHHHHHHHHHHHHHHhcCceeEeccCC-CCCcceecCCCHHHHHHHHHHc-CCCHHHHHHHHhheEEecccccCC
Confidence            59999999999999999999999999987531 23456553 3568899999999 99999999999999998     78


Q ss_pred             CcEEEecCCccCC
Q psy9984         132 QESFNKPMSVFEM  144 (144)
Q Consensus       132 ge~i~~~ls~~q~  144 (144)
                      |+.+.+|++++|+
T Consensus       351 ~~~i~~~l~~~qA  363 (717)
T cd01382         351 GTVIKVPLKVEQA  363 (717)
T ss_pred             CceEEecCCHHHH
Confidence            9999999999874

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of

>KOG0162|consensus

Probab=99.81  E-value=4e-21  Score=162.59  Aligned_cols=136  Identities=22%  Similarity=0.242  Sum_probs=108.7

Q ss_pred             cchhcccHHHHHHHHHHHHHcCCC--------------------hhcH-HHHHHHHHHH----h-------------h--
Q psy9984           3 PAVLYNLQVRFCQHNAIYTYCGFS--------------------ALDQ-EVIFRILSSI----L-------------H--   42 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~i~G~~--------------------~~e~-~~if~~la~i----L-------------~--   42 (144)
                      .|+||||+|||+++.++-+--|+.                    ..|+ .|||+.+...    +             +  
T Consensus       159 kTvRNnNSSR~GKY~Ei~Fs~ggeP~ggkisNfLLEKsRVV~q~~neRnFHIfYQ~~kgAs~~~r~t~Gi~~pe~Y~Y~~  238 (1106)
T KOG0162|consen  159 KTVRNNNSSRFGKYLEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHIFYQLTKGASQEYRQTFGIQEPEYYVYLN  238 (1106)
T ss_pred             hhhccCCcccccceEEEEecCCCCcCcchhhHHHHhhhhhhhccCCccceeeehhhhcCccHHHHhhhCcCCchheeeec
Confidence            589999999999998886543333                    2333 6999877443    1             1  


Q ss_pred             -cCCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          43 -LGNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        43 -lGni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                       -|+....+.++.+++        .+|+..+++..||+++|+|||||||.|.+.    +..+.| .+.+.++..|.|| |
T Consensus       239 ~sg~~s~D~idd~kdfq~Tl~AM~vIGi~~~eQ~~v~rmva~IL~lGNIsF~Ee----~~~a~V-~~~~~~~f~ayLl-g  312 (1106)
T KOG0162|consen  239 ASGCYSVDDIDDRKDFQETLHAMKVIGINQEEQDEVLRMVAGILHLGNISFIEE----GNYAAV-SDKSVLEFPAYLL-G  312 (1106)
T ss_pred             cccceeccccchHHHHHHHHHHheeccCChHHHHHHHHHHHHHHhccceeEEee----CCccee-ccchHHHhHHHHh-c
Confidence             177776666554433        799999999999999999999999999985    334556 6788899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeC----CcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTM----QESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~----ge~i~~~ls~~q~  144 (144)
                      |+...|.++||.|.|.++    .|++..||+++|+
T Consensus       313 i~s~~l~~~Lt~R~M~s~~G~kr~~~~v~LNv~QA  347 (1106)
T KOG0162|consen  313 IDSARLEEKLTSRIMESKWGGKREVIHVPLNVEQA  347 (1106)
T ss_pred             CCHHHHHHHHHHHHHhhcccccceeEEecccHHHH
Confidence            999999999999999884    5999999999985

>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril

Probab=99.80  E-value=1.7e-21  Score=168.50  Aligned_cols=138  Identities=28%  Similarity=0.411  Sum_probs=100.4

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      .|++|+|++||+++.+..+     ++|.+               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       142 kT~~N~nSSRfgk~~~l~f~~~~~~~g~~i~~ylLEksRv~~~~~~ErnfhiFYqll~G~~~~~~~~l~L~~~~~~~yL~  221 (689)
T PF00063_consen  142 KTPRNDNSSRFGKFIELQFDDSGQIVGAKIETYLLEKSRVVRQPPGERNFHIFYQLLAGADDEERKELRLNDASDYRYLN  221 (689)
T ss_dssp             EESSETTEESSEEEEEEEEETTSSEEEEEEEEEEE-GGGGT---TTS-SBHHHHHHHHTSSHHHHHHTT-S-GGGSTTCC
T ss_pred             ccccCCcccccceEEEEEecccccccccceecccccccceeeccccccccchhhhhhhccchhhhhccccccccccccee
Confidence            4899999999999877643     23333               3455 5999777654        344322       


Q ss_pred             -----eeecCCCCCC--------cccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDT--------DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~--------~~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++...        ..+||+++++..||++||||||||||+|.+..  +++.+.+ .+.+.++.+|+|| |
T Consensus       222 ~~~~~~~~~~~d~~~f~~l~~al~~lg~~~~e~~~I~~iLaaILhLGni~F~~~~--~~~~~~~-~~~~~l~~~a~LL-g  297 (689)
T PF00063_consen  222 QSGCSTIPGIDDAEEFQELKDALKTLGFSDEEIDDIFRILAAILHLGNIEFVEDE--SDESAEV-ENSEELQKAAELL-G  297 (689)
T ss_dssp             TTSSSSBTTCTHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTTSSEEEET--TSSSEEE-STSHHHHHHHHHT-T
T ss_pred             cccccccCCccCHHHhhhhhhhhccccCchhHHHHHHHHHHHHhhhccccccccc--cccceee-chHHHHHHhhhhc-C
Confidence                 1111111111        15999999999999999999999999999875  3445555 6777899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+.+|++++|+
T Consensus       298 v~~~~L~~~l~~~~~~~~~e~~~~~~~~~~a  328 (689)
T PF00063_consen  298 VDSEELEKALTTRTIKVGGETVTKPLSVEQA  328 (689)
T ss_dssp             S-HHHHHHHHHSEEEESTTSEEEEE-BHHHH
T ss_pred             CCHHHHHHHHhhccccccccccccccchhhh
Confidence            9999999999999999999999999998874

Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....

>KOG0163|consensus

Probab=99.80  E-value=1.9e-20  Score=159.03  Aligned_cols=85  Identities=26%  Similarity=0.474  Sum_probs=75.0

Q ss_pred             cccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceec-CChhHHHHHHHHhcCCCHHHHHHHHhhceeee-----CC
Q psy9984          59 CSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIA-PSSGSLAAFCDILYNIDRDEFRRCLTHRKITT-----MQ  132 (144)
Q Consensus        59 ~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~-~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~~-----~g  132 (144)
                      +|+++++...||+++|+|||||||+|++...+...+|.|. .++++|..+|+|| |++.++|...||.|.+.+     +|
T Consensus       327 ~Glsd~Ekl~i~s~vA~vLHLGNieFEE~~ddsrGGC~v~n~seqsL~~~a~LL-Gld~~elr~~L~aRvMqtt~GG~kG  405 (1259)
T KOG0163|consen  327 LGLSDTEKLFIWSTVAAVLHLGNIEFEEIPDDSRGGCQVSNGSEQSLTIAAELL-GLDQTELRTGLCARVMQTTKGGFKG  405 (1259)
T ss_pred             cCCChHHHHHHHHHHHHHHHccccchhcccCcCCCceecccCchhhHHHHHHHh-CCCHHHHHHHHHHHHHHhccCCccc
Confidence            8999999999999999999999999998864445678884 4568999999999 999999999999999877     26


Q ss_pred             cEEEecCCccCC
Q psy9984         133 ESFNKPMSVFEM  144 (144)
Q Consensus       133 e~i~~~ls~~q~  144 (144)
                      ..|.+||.+.|+
T Consensus       406 TvIrVPLK~~eA  417 (1259)
T KOG0163|consen  406 TVIRVPLKIHEA  417 (1259)
T ss_pred             eEEEeeccHHhh
Confidence            889999998774

>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins

Probab=99.77  E-value=1.4e-19  Score=157.53  Aligned_cols=126  Identities=18%  Similarity=0.180  Sum_probs=92.8

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCee------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNIQ------   47 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni~------   47 (144)
                      .|++|||+|||+++.++.+     ++|..               .+|+ +|||+.+.+.        |+|.+..      
T Consensus       140 kT~rNdNSSRFGK~i~l~F~~~g~i~Ga~i~~yLLEKSRVv~q~~gERNFHIFYqLlaG~~~~~~~~l~L~~~~~~~~~~  219 (767)
T cd01386         140 STALNGNATRFTQILSLDFDQTGQIASASLQTMLLERSRVARRPNGETNFVVFSQLLAGVDGDLRTELHLEQMAESSSFG  219 (767)
T ss_pred             CcCCCCCcCcceeEEEEEECCCCcEeEEEEEEEecccCceeecCCCCCcchhHHHHHhCCCHHHHHHhcCCCccccchhh
Confidence            4899999999999988854     44443               3455 7999877653        3443221      


Q ss_pred             ---eecCCCC----CC--------cccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhc
Q psy9984          48 ---FSGGSHG----DT--------DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILY  112 (144)
Q Consensus        48 ---f~~~~~~----~~--------~~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~  112 (144)
                         .....+.    +.        ..+||+++++..||++||||||||||+|...    .+.+.+ .+.+.++.+|+|| 
T Consensus       220 ~~~~~~~~d~~~D~~~f~~~~~Al~~lGfs~~e~~~If~iLaaILhLGNi~f~~~----~~~~~~-~~~~~~~~vA~LL-  293 (767)
T cd01386         220 MGGLSKPEDKQKAAIDFSRLQQAMEVLGISEGEQRAIWRVLAAIYHLGAAGATKV----AGRKQF-ARPEWAQKAAELL-  293 (767)
T ss_pred             cCCCCCCcCcccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeeec----CCcccc-CCHHHHHHHHHHh-
Confidence               0111111    11        1599999999999999999999999999863    223445 5778899999999 


Q ss_pred             CCCHHHHHHHHhhceeeeCCcE
Q psy9984         113 NIDRDEFRRCLTHRKITTMQES  134 (144)
Q Consensus       113 gv~~~~L~~aLt~r~~~~~ge~  134 (144)
                      ||++++|.++|+++++..+++.
T Consensus       294 gv~~~~L~~al~~~~~~~~~~~  315 (767)
T cd01386         294 GCPLEELSSATFKHTLRGGINQ  315 (767)
T ss_pred             CCCHHHHHHHhcccEEeeccee
Confidence            9999999999999988777543

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the

>KOG0160|consensus

Probab=99.73  E-value=6.1e-18  Score=147.08  Aligned_cols=136  Identities=33%  Similarity=0.451  Sum_probs=105.9

Q ss_pred             chhcccHHHHHHHHHHHH-----HcCCC----------------hhcHHHHHHHHHHH-------hhcCCe---------
Q psy9984           4 AVLYNLQVRFCQHNAIYT-----YCGFS----------------ALDQEVIFRILSSI-------LHLGNI---------   46 (144)
Q Consensus         4 t~~~~n~~~f~~~~~a~~-----i~G~~----------------~~e~~~if~~la~i-------L~lGni---------   46 (144)
                      |++|||++||+++.++.+     |.|..                .+.-+|||+.+++.       |+||+.         
T Consensus       149 T~rndnsSrFgK~iei~Fd~~~~I~GA~~~TYLLekSRv~~~~~~ernyhiFyQlca~~~~~~~~l~L~~~~~f~yl~q~  228 (862)
T KOG0160|consen  149 TTRNDNSSRFGKVIEITFDQQGRISGAKIRTYLLEKSRVVQLSAPERNYHIFYQLCAGAPEELEKLKLGTLRRFSYLNQS  228 (862)
T ss_pred             hhhcccHHHhhhHHHHhhhhhcccccceeeeEEeecceeeecCccccchHHHHHHhcCCchhhhccCcCccccceecccc
Confidence            899999999999999975     44544                22348999999884       345432         


Q ss_pred             ---eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCCC
Q psy9984          47 ---QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNID  115 (144)
Q Consensus        47 ---~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv~  115 (144)
                         .+.+.++...+        .+|++.++++.+|+++|++|||||++|....   .+.+.. +.++.+..+|+|+ |++
T Consensus       229 ~~~~i~~v~d~~e~~~t~~A~~~vgi~~~~q~~if~lla~ilhlGni~f~~~~---~~~~~~-~~~~~~~~~a~Ll-g~~  303 (862)
T KOG0160|consen  229 ACVLISGVSDAEEFLSTTEAMLFVGISESHQELIFRLLAAILHLGNIQFSSGV---EETSSS-PVDDHLWTAAELL-GCD  303 (862)
T ss_pred             cchhhcccccHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhccCceEeeccc---cccccc-ccchHHHHHHHHh-CCC
Confidence               33333332222        5899999999999999999999999998764   222222 3344899999999 999


Q ss_pred             HHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         116 RDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       116 ~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++.|.++|+.|++.++++.+.+|++..|+
T Consensus       304 ~~~l~~~L~~r~i~~~~e~i~k~l~~~qa  332 (862)
T KOG0160|consen  304 EEALEQWLSKRKILTARESIVKPLTLSQA  332 (862)
T ss_pred             HHHHHHHHHHHHhhcccceeecccCHHHH
Confidence            99999999999999999999999998763

>KOG0161|consensus

Probab=99.66  E-value=9.6e-18  Score=154.86  Aligned_cols=138  Identities=27%  Similarity=0.352  Sum_probs=107.3

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCCh---------------hcH-HHHHHHHHHHhh--------c----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFSA---------------LDQ-EVIFRILSSILH--------L----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~~---------------~e~-~~if~~la~iL~--------l----------   43 (144)
                      .||+|||++||++++++.+     ++|...               .|+ +||||.+-+-++        |          
T Consensus       227 ~tvrn~NssRFgkfirI~F~~~G~i~~a~Ie~yLLEKsRv~~Q~~~Er~yhiFyqlls~~~~~l~~~l~L~~~~~~Y~f~  306 (1930)
T KOG0161|consen  227 KTVRNDNSSRFGKFIRIHFDATGKIAGADIETYLLEKSRVIRQAPGERNYHIFYQLLSGADPELKEELLLSDNVKDYKFL  306 (1930)
T ss_pred             hhhcCCCCcccceeEEEecCCCCccchhhHHHHHHHHhHhhccCcchhHHHHHHHHHhCCCHHHHHHHhhcccchhhhhh
Confidence            6999999999999999976     344442               233 799977655321        1          


Q ss_pred             --CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 --GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 --Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                        |...+.+.++...+        .+||+++++.++|+++|+||||||+.|....  +.+.+.+ ++......+|.|| |
T Consensus       307 ~~~~~~i~g~dd~eef~~t~~a~~ilgfs~~E~~~~~~i~sailhlGn~~f~~~~--~~~qa~~-~~~~~a~ka~~ll-g  382 (1930)
T KOG0161|consen  307 SNGESTIPGVDDAEEFQETDEAMDILGFSEEEKISIFRIVSAILHLGNIKFKQEP--REEQAEF-DNTEVADKACHLL-G  382 (1930)
T ss_pred             ccccCCCCCcchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcchhhhccc--cccccCC-CCchHHHHHHHHc-C
Confidence              22222333332222        6999999999999999999999999999875  4556666 6788899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++.++|.+++++++++++++.+.+..+.+||
T Consensus       383 ~~~~~~~~al~~priKvg~e~v~k~q~~~q~  413 (1930)
T KOG0161|consen  383 INVEEFLKALLRPRIKVGREWVSKAQNVEQV  413 (1930)
T ss_pred             CCHHHHHHHhcccceeccchhhhhcchHHHH
Confidence            9999999999999999999999988877663

>KOG4229|consensus

Probab=99.24  E-value=9.1e-13  Score=117.44  Aligned_cols=85  Identities=25%  Similarity=0.316  Sum_probs=76.8

Q ss_pred             ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCCCHHHHHHHHhhceeeeCCcEEEe
Q psy9984          58 SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNK  137 (144)
Q Consensus        58 ~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~~~ge~i~~  137 (144)
                      .++|.++++..+++++++|||+|||+|.....+..|.+.| .+...+..+|.|| .++++.|.+++|.++..++||.+..
T Consensus       306 v~~f~~~~~~si~~~la~il~~gni~~~~~~~~~~d~~~v-~~~~~v~~vA~lL-~~~~~~l~~alt~~~~~~~ge~~~~  383 (1062)
T KOG4229|consen  306 VVGFTDKVLGSIFKSLAAILHIGNISYIKFALDQQDSAEV-ENEEAVERVACLL-LIKEKLLQEALTARVNVTRGELLLA  383 (1062)
T ss_pred             HhccchhHHHHHHHhcccceeecceeHHhhhcccccchhc-ccchHHHHHHHHh-hcCHHHhhhhhcccceeeehhhhhh
Confidence            5899999999999999999999999998775434566677 6889999999999 9999999999999999999999999


Q ss_pred             cCCccCC
Q psy9984         138 PMSVFEM  144 (144)
Q Consensus       138 ~ls~~q~  144 (144)
                      |++.+++
T Consensus       384 ~l~~~~A  390 (1062)
T KOG4229|consen  384 PLLVERA  390 (1062)
T ss_pred             hhhHHHh
Confidence            9998764

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=98.91  E-value=5.6e-09  Score=94.78  Aligned_cols=106  Identities=17%  Similarity=0.216  Sum_probs=72.2

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCc------------ccccchhhHHHHHHHHHH
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTD------------SCSFSALDQEVIFRILSS   75 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~------------~~g~~~~~~~~i~~ila~   75 (144)
                      |+..+|..+..||.++||..++|..||++||+|||+|||+|....++...            .+|+++......  ++--
T Consensus       298 dD~kefk~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~g~a~~~~~~~~~~~c~LLgId~~~f~k~--lvk~  375 (1463)
T COG5022         298 DDAKEFKITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRNGAAIFSDNSVLDKACYLLGIDPSLFVKW--LVKR  375 (1463)
T ss_pred             ccHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeecccchhhcCCchHHHHHHHHhCCCHHHHHHH--HHHh
Confidence            57899999999999999999999999999999999999999875543321            244444321110  1111


Q ss_pred             HhcccCeeeecCCCCCCCcceecCCh----hHHHHHHHHhcCCCHHHHHHHHhhceeee
Q psy9984          76 ILHLGNIQFSGGSHGDTDSCSIAPSS----GSLAAFCDILYNIDRDEFRRCLTHRKITT  130 (144)
Q Consensus        76 ILhlGni~F~~~~~~~~~~~~v~~~~----~~l~~~a~LL~gv~~~~L~~aLt~r~~~~  130 (144)
                      ++.-|           .+.-.+..+.    ...+.+|+.|    ++.|..||+.|..++
T Consensus       376 ~ikt~-----------~E~i~~~~n~~QA~~irdslAK~l----Y~~lFdwiV~rIN~s  419 (1463)
T COG5022         376 QIKTG-----------GEWIVVPLNLEQALAIRDSLAKAL----YSNLFDWIVDRINKS  419 (1463)
T ss_pred             HhhcC-----------ceEEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhh
Confidence            12222           1211111121    3468899999    999999999887544

>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins

Probab=98.90  E-value=6.9e-09  Score=90.11  Aligned_cols=116  Identities=14%  Similarity=0.198  Sum_probs=79.4

Q ss_pred             cccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           7 YNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         7 ~~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      .|+.++|.+++.||..+||+.+++..||++||+||||||++|..........+.+.+.   ..+..+|.+|-+..-++..
T Consensus       227 ~dD~~~f~~~~~al~~lG~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~i~~~---~~l~~~a~LLgv~~~~L~~  303 (671)
T cd01381         227 RDDAKDFADIRSAMKVLMFTDQEIWEIFKLLAAILHIGNLRFEATEVDNLAACEVDDT---PNLQRVAQLLGVPIQDLMD  303 (671)
T ss_pred             ccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeeccCCCCCceeeCCh---HHHHHHHHHhCCCHHHHhh
Confidence            3578999999999999999999999999999999999999998754322223334432   2567777777765433321


Q ss_pred             CC-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          87 GS-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        87 ~~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      .-     ..+++.....-+    ....+.+|+-|    ++.|..|++.|...
T Consensus       304 ~lt~~~~~~~~e~i~~~~~~~qA~~~rdalak~l----Y~~lF~wiV~~IN~  351 (671)
T cd01381         304 ALTSRTIFTRGETVVTPLSREQAVDVRDAFVKGI----YGRLFVWIVRKINA  351 (671)
T ss_pred             hhceEEEEeCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            10     001111111111    24567889999    99999999987643

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr

>PTZ00014 myosin-A; Provisional

Probab=98.89  E-value=6.4e-09  Score=91.91  Aligned_cols=116  Identities=19%  Similarity=0.184  Sum_probs=77.0

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC-CCCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH-GDTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~-~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      |+..+|.++++||.++||+.+|+..||+++|+||||||++|..... +..+...+.++. ...+..+|.+|-+..-++..
T Consensus       326 dD~~~f~~~~~A~~~lg~s~~e~~~If~ilaaILhLGNi~F~~~~~~~~~~~~~i~~~~-~~~l~~~a~LLgv~~~~L~~  404 (821)
T PTZ00014        326 DDVKDFEEVMESFDSMGLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDES-LEVFNEACELLFLDYESLKK  404 (821)
T ss_pred             chHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeccccCCCCCceeccCCC-HHHHHHHHHHhCCCHHHHHH
Confidence            5789999999999999999999999999999999999999986532 222223333221 22556666666654322221


Q ss_pred             CC-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          87 GS-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        87 ~~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      .-     ..+.+.....-+    ....+.+|+-|    ++.|..||+.|..
T Consensus       405 ~L~~~~~~~~~e~i~~~~~~~qA~~~rdalaK~l----Y~rLF~wiV~~IN  451 (821)
T PTZ00014        405 ELTVKVTYAGNQKIEGPWSKDESEMLKDSLSKAV----YEKLFLWIIRNLN  451 (821)
T ss_pred             HhhceEEEeCCeeEecCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            10     001111111011    24578899999    9999999998764

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins

Probab=98.89  E-value=8.6e-09  Score=89.80  Aligned_cols=116  Identities=18%  Similarity=0.227  Sum_probs=79.9

Q ss_pred             cccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC-CCCcccccchhhHHHHHHHHHHHhcccCeeee
Q psy9984           7 YNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH-GDTDSCSFSALDQEVIFRILSSILHLGNIQFS   85 (144)
Q Consensus         7 ~~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~-~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~   85 (144)
                      .|+...|.++++||..+||+.+++..||++||+||||||++|....+ +..+...+...+   .+..+|.+|.+..-++.
T Consensus       238 ~dd~~~f~~~~~al~~lG~~~~~~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~~~~~---~l~~~a~LLgv~~~~L~  314 (692)
T cd01385         238 EDEKHEFERLKQAMEMVGFLAATQKQIFAVLSAVLLLGNVTYKKRATYHRDESLEVGNPE---VVDLLSQLLKVKRETLM  314 (692)
T ss_pred             CCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeeecccCCCCCceecCCHH---HHHHHHHHhCCCHHHHH
Confidence            36788999999999999999999999999999999999999986543 223333344332   57777877777544432


Q ss_pred             cCC-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          86 GGS-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        86 ~~~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      ..-     ...++.....-+    ....+..|+.|    ++.|..|++.+.-.
T Consensus       315 ~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~l----Y~~LF~wiV~~IN~  363 (692)
T cd01385         315 EALTKKRTVTVNETLILPYSLSEAITARDAMAKCL----YSALFDWIVLRINH  363 (692)
T ss_pred             HHhccCeEEeCCCeEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            110     001222221111    24567889999    99999999987643

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea

>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

Probab=98.87  E-value=9.5e-09  Score=89.28  Aligned_cols=116  Identities=19%  Similarity=0.270  Sum_probs=79.2

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.+.|.+++.||..+||+.+++..||++||+||||||++|....+.  +...+.+..-...+..+|.+|.+..-++...
T Consensus       233 ~D~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~~--~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~  310 (674)
T cd01384         233 DDAEEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEI--DSSVLKDEKSEFHLKTAAELLMCDEKALEDA  310 (674)
T ss_pred             chHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCCC--CcccccCcccHHHHHHHHHHhCCCHHHHHHH
Confidence            57899999999999999999999999999999999999999865421  1122222211346777788887765443321


Q ss_pred             CC-----CCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 SH-----GDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ~~-----~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      -.     ...+.....-+    ....+.+|+.|    ++.|..|++.|...
T Consensus       311 L~~~~~~~~~e~i~~~~~~~~a~~~rdalak~l----Y~~LF~wiV~~iN~  357 (674)
T cd01384         311 LCKRVMVTPEEVITKPLDPDSAELSRDALAKTI----YSRLFDWLVNKINS  357 (674)
T ss_pred             hcccEEEeCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            00     01121111111    24677899999    99999999987643

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act

>cd00124 MYSc Myosin motor domain

Probab=98.87  E-value=1.1e-08  Score=89.12  Aligned_cols=116  Identities=21%  Similarity=0.288  Sum_probs=79.5

Q ss_pred             cccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           7 YNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         7 ~~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      .|+.++|.+++.||..+||+.+++..||++||+||||||++|...++.....+.+.+.+   .+..+|.+|.+..-++..
T Consensus       228 ~~d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~f~~~~~~~~~~~~~~~~~---~l~~~a~LLgv~~~~L~~  304 (679)
T cd00124         228 IDDAEEFEELKEALKSLGFSEEEIESIFRILAAILHLGNIEFKSVGGEGQEAAEVKNTE---VLSKAAELLGLDPEELEE  304 (679)
T ss_pred             CCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeeEEecCCCCcceeecCCHH---HHHHHHHHhCCCHHHHHH
Confidence            46789999999999999999999999999999999999999987654332223333322   567777777766533321


Q ss_pred             CC-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          87 GS-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        87 ~~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      .-     ..+++......+    ....+.+|+-|    ++.|..|++.|...
T Consensus       305 ~l~~~~~~~~~~~~~~~~~~~~a~~~rdalak~l----Y~~lF~wiV~~iN~  352 (679)
T cd00124         305 ALTYKVTKVGGEVITIPLTKEEAVDSRDSLAKAL----YSRLFDWIVSRINS  352 (679)
T ss_pred             HhhccEEEeCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            10     001121111111    24567889999    99999999987643

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila

>smart00242 MYSc Myosin

Probab=98.87  E-value=1.1e-08  Score=88.92  Aligned_cols=113  Identities=22%  Similarity=0.292  Sum_probs=77.8

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+...|.+++.+|..+||+.+|+..||++||+||||||++|...++...... +...+   .++.+|.+|.+..-++...
T Consensus       237 ~d~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~~-~~~~~---~l~~~a~LLgv~~~~L~~~  312 (677)
T smart00242      237 DDAEEFKETLNAMRVLGFSEEEQESIFKILAAILHLGNIEFEEGRNDNAAST-VKDKE---ELENAAELLGVDPEELEKA  312 (677)
T ss_pred             CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCCCcccc-cCCHH---HHHHHHHHhCCCHHHHHHH
Confidence            5788999999999999999999999999999999999999987554322211 33322   5677777777754333211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+.....-+    ....+.+|+-|    ++.|..|++.|.-
T Consensus       313 l~~~~~~~~~e~~~~~~~~~~a~~~rd~lak~l----Y~~lF~wiV~~iN  358 (677)
T smart00242      313 LTKRKIKTGGEVITKPLNVEQALDARDALAKAL----YSRLFDWLVKRIN  358 (677)
T ss_pred             hcccEEEeCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001121111111    24578899999    9999999998763

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.

>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

Probab=98.86  E-value=9.7e-09  Score=89.28  Aligned_cols=112  Identities=16%  Similarity=0.137  Sum_probs=74.1

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+...|.+++.||..+||+.+++..||++||+||||||++|...++.+.  +.+..+   +.+..+|.+|-+..-++...
T Consensus       233 dd~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~--~~~~~~---~~l~~~a~LLgv~~~~L~~~  307 (677)
T cd01383         233 DDAQRFHTLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNENH--VEPVAD---EALSTAAKLIGCNIEDLMLA  307 (677)
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCCCcc--cccCCh---HHHHHHHHHhCCCHHHHHHH
Confidence            5688999999999999999999999999999999999999986443221  111111   24556666666543222211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+.....-+    ....+.+|+-|    ++.|..|++.|..
T Consensus       308 l~~~~~~~~~e~~~~~~~~~qa~~~rdalak~l----Y~~lF~wiV~~IN  353 (677)
T cd01383         308 LSTRKMHVNNDNIVQKLTLQQAIDARDALAKSI----YASLFDWLVEQIN  353 (677)
T ss_pred             hhhcEEEeCCceEeecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001111111111    24567889999    9999999998764

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f

>cd01380 MYSc_type_V Myosin motor domain, type V myosins

Probab=98.85  E-value=1.2e-08  Score=88.96  Aligned_cols=113  Identities=17%  Similarity=0.184  Sum_probs=74.9

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+..+|.+++.||..+||+.+|+..||++||+||||||++|...++... .  +...  ...+..+|.+|-+..-++...
T Consensus       234 ~d~~~f~~~~~al~~lg~s~~e~~~I~~iLaaILhLGni~F~~~~~~~~-~--~~~~--~~~l~~~a~LLgv~~~~L~~~  308 (691)
T cd01380         234 DDAEDFNATVQALTLLGISEEQQMDIFKLLAALLHLGNIEIEATRNDSS-S--ISPK--DENLQIACELLGVDASDLRKW  308 (691)
T ss_pred             ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCCccc-e--ecCC--hHHHHHHHHHhCCCHHHHHHH
Confidence            6789999999999999999999999999999999999999987543221 1  1110  123556666665544333211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      -     ..+.+......+    ....+.+|+.|    ++.|..|++.|...
T Consensus       309 l~~~~~~~~~e~i~~~~~~~qA~~~rdalak~l----Y~~LF~wiV~~iN~  355 (691)
T cd01380         309 LVKRQIVTRSEKIVKPLTKEQAIVARDALAKHI----YSKLFDWIVDVINK  355 (691)
T ss_pred             HHhCEEEECCeeEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            0     001111111111    24567889999    99999999987643

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act

>cd01379 MYSc_type_III Myosin motor domain, type III myosins

Probab=98.85  E-value=1.4e-08  Score=87.96  Aligned_cols=113  Identities=19%  Similarity=0.283  Sum_probs=75.9

Q ss_pred             cHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC-CCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           9 LQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH-GDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         9 n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~-~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      +...|.++++||..+||+.+++..||++||+||||||++|...+. .......+...   ..+..+|.+|.+..-++...
T Consensus       235 ~~~~f~~~~~al~~lg~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~~~~~~i~~~---~~l~~~A~LLgv~~~~L~~~  311 (653)
T cd01379         235 YKDQFEQIEQCFRVIGFTDEEVGSVYRILAAILNLGDIEFGSVASEHQTDKSRVSNV---AALENAASLLCIRSDELQEA  311 (653)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEeccccCCCcccccCCH---HHHHHHHHHhCCCHHHHHHH
Confidence            467899999999999999999999999999999999999986542 22222233332   24666677776654333211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ...++......+    ....+.+|+-|    ++.|..|++.|.-
T Consensus       312 L~~~~~~~~ge~i~~~~~~~qA~~~rdalak~l----Y~~LF~wiV~~IN  357 (653)
T cd01379         312 LTSHCVVTRGETIVRHNTVEKATDARDAMAKAL----YGRLFSWIVNRIN  357 (653)
T ss_pred             hcccEEEeCCceeeecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001121111111    25678889999    9999999998763

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the

>cd01377 MYSc_type_II Myosin motor domain, type II myosins

Probab=98.85  E-value=1.1e-08  Score=89.17  Aligned_cols=112  Identities=20%  Similarity=0.265  Sum_probs=73.6

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+...|.+++.+|..+||+.+++..||++||+||||||++|....+.+.  ..+.+.   ..+..+|.+|.+..-++...
T Consensus       243 ~d~~~f~~~~~al~~lG~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~--~~~~~~---~~l~~~a~LLgv~~~~L~~~  317 (693)
T cd01377         243 DDAEEFKLTDEAFDILGFSDEEKNSIFKIVAAILHLGNIKFKQRQREEQ--AELDGT---EEADKAAHLLGVNSADLLKA  317 (693)
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCCCCc--cccCCh---HHHHHHHHHhCCCHHHHHHH
Confidence            6789999999999999999999999999999999999999987532211  112221   24555555555433222211


Q ss_pred             C-----CCCCCcceecC----ChhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAP----SSGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~----~~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+......    .....+.+|+.|    ++.|..|++.|..
T Consensus       318 l~~~~~~~~~e~i~~~~~~~~A~~~rDalak~l----Y~~LF~wiV~~IN  363 (693)
T cd01377         318 LLHPRIKVGREWVTKGQNVEQVSFSVGALAKAL----YERLFLWLVKRIN  363 (693)
T ss_pred             hcceEEEECCeeEeeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     00111111111    124577899999    9999999998763

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro

>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins

Probab=98.82  E-value=1.9e-08  Score=87.56  Aligned_cols=115  Identities=23%  Similarity=0.271  Sum_probs=76.6

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      ++...|.+++.||..+||+.+++..||++||+||||||++|............+...+   .+..+|.+|.+..-++...
T Consensus       229 ~d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~~~~~~~---~l~~~a~LLgv~~~~L~~~  305 (677)
T cd01387         229 SDADDFRRLLAAMEVLGFSSEDQDSIFRILASILHLGNVYFEKRETDAQEVASVVSAR---EIQAVAELLQISPEGLQKA  305 (677)
T ss_pred             CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeEEeeccCCCCcccccCCHH---HHHHHHHHhCCCHHHHHHH
Confidence            5678999999999999999999999999999999999999986543222222233222   4566677776654333211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      -     ....+.....-+    ....+.+|+-|    ++.|..|++.+...
T Consensus       306 lt~~~~~~~~e~i~~~~~~~~a~~~rdalak~l----Y~~lF~wiV~~iN~  352 (677)
T cd01387         306 ITFKVTETRREKIFTPLTVESAVDARDAIAKVL----YALLFNWLITRVNA  352 (677)
T ss_pred             hccCeEEeCCceEeccCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            0     001111111111    23567889999    99999999987643

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus

>cd01378 MYSc_type_I Myosin motor domain, type I myosins

Probab=98.81  E-value=2.1e-08  Score=87.17  Aligned_cols=111  Identities=22%  Similarity=0.342  Sum_probs=75.3

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+...|.++++||..+||+.+++..||++||+||||||++|...++..   +-+.+.   +.+..+|.+|.+..-++...
T Consensus       231 ~d~~~f~~~~~al~~lG~s~~e~~~i~~ilaaILhLGni~f~~~~~~~---~~~~~~---~~l~~~a~LLgv~~~~L~~~  304 (674)
T cd01378         231 DDKKDFKETQNAMKVIGFSEDEQDEIFRIVAAILHLGNVQFAENGDGA---AVISDK---DVLDFAAYLLGVDPSELEKA  304 (674)
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeccCCCc---cccCCh---HHHHHHHHHcCCCHHHHHHH
Confidence            567899999999999999999999999999999999999998754432   122222   24556666666544333211


Q ss_pred             ------CCCC---CCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 ------SHGD---TDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ------~~~~---~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                            ...+   .+.....-+    ....+.+|+.|    ++.|..|++.|..
T Consensus       305 l~~~~~~~~~~~~~e~i~~~~~~~~a~~~rdalak~l----Y~~lF~wiV~~IN  354 (674)
T cd01378         305 LTSRTIETGGGGRGEVYDVPLNVEQAAYTRDALAKAI----YSRLFDWLVSRIN  354 (674)
T ss_pred             hcccEEEeCCCCCceeEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence                  0001   021111111    24578899999    9999999998763

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon

>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins

Probab=98.81  E-value=3.1e-08  Score=87.15  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=41.4

Q ss_pred             cccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeec
Q psy9984           7 YNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSG   50 (144)
Q Consensus         7 ~~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~   50 (144)
                      .++..+|.++++||..+||+.+|+..||++||+||||||+.|..
T Consensus       230 ~~D~~~f~~~~~Al~~lGfs~~e~~~If~iLaaILhLGNi~f~~  273 (767)
T cd01386         230 QKAAIDFSRLQQAMEVLGISEGEQRAIWRVLAAIYHLGAAGATK  273 (767)
T ss_pred             ccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeee
Confidence            35678999999999999999999999999999999999999976

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the

>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins

Probab=98.75  E-value=4.8e-08  Score=85.50  Aligned_cols=116  Identities=15%  Similarity=0.234  Sum_probs=74.2

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeec-
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSG-   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~-   86 (144)
                      |+...|.+++.||..+||+.+++..||++||+||||||++|...++. ...+.+... -...+..+|.+|.+..-++.. 
T Consensus       259 dD~~~f~~~~~Al~~lg~s~~e~~~i~~iLaaILhLGni~F~~~~~~-~~~~~~~~~-~~~~l~~~a~LLgv~~~~L~~~  336 (717)
T cd01382         259 DDYGDFQRMCVALKKIGLDDTEKLDLFRVVAGVLHLGNIDFEEAGST-SGGCNVKNQ-SEQSLEYCAELLGLDQDDLRVS  336 (717)
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCceeEeccCCC-CCcceecCC-CHHHHHHHHHHcCCCHHHHHHH
Confidence            56789999999999999999999999999999999999999864321 111111111 112455566666554332211 


Q ss_pred             ---------CCCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          87 ---------GSHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        87 ---------~~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                               .+...++...+.-+    ....+.+|+-|    ++.|..|++.+...
T Consensus       337 l~~r~~~~~~g~~~~~~i~~~l~~~qA~~~rdalak~l----Y~~LF~wiV~~IN~  388 (717)
T cd01382         337 LTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKAV----YSHLFDHVVSRVNQ  388 (717)
T ss_pred             HhheEEecccccCCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence                     00001111111111    24567889999    99999999987643

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of

>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril

Probab=98.69  E-value=6.6e-08  Score=84.27  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=72.4

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      ++..+|.+++.+|..+||+.+++..||++||+|||||||+|....+...  .-+.+.+   .+..+|.+|.+..-++...
T Consensus       232 ~d~~~f~~l~~al~~lg~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~--~~~~~~~---~l~~~a~LLgv~~~~L~~~  306 (689)
T PF00063_consen  232 DDAEEFQELKDALKTLGFSDEEIDDIFRILAAILHLGNIEFVEDESDES--AEVENSE---ELQKAAELLGVDSEELEKA  306 (689)
T ss_dssp             THHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTTSSEEEETTSSS--EEESTSH---HHHHHHHHTTS-HHHHHHH
T ss_pred             cCHHHhhhhhhhhccccCchhHHHHHHHHHHHHhhhccccccccccccc--eeechHH---HHHHhhhhcCCCHHHHHHH
Confidence            5788999999999999999999999999999999999999988663211  1122222   2455555555533222110


Q ss_pred             -----CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 -----SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 -----~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                           .....+...+..+    ....+.+|+.|    +..|..|++.+..
T Consensus       307 l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~L----Y~~LF~wIV~~iN  352 (689)
T PF00063_consen  307 LTTRTIKVGGETVTKPLSVEQASDARDALAKAL----YSRLFDWIVERIN  352 (689)
T ss_dssp             HHSEEEESTTSEEEEE-BHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             Hhhccccccccccccccchhhhhhhhhhhhhhh----hhHHHHHHHHhhh
Confidence                 0001222222112    24578899999    9999999998764

Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....

>KOG0164|consensus

Probab=98.67  E-value=1.2e-07  Score=81.65  Aligned_cols=46  Identities=28%  Similarity=0.504  Sum_probs=43.0

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH   53 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~   53 (144)
                      |++++|+.+.+||.++||+++|..++|+++|++|||||+.|....+
T Consensus       241 nD~~dfk~V~~Am~vIgFs~eEVe~v~~iiAavLhLGNv~f~~~ed  286 (1001)
T KOG0164|consen  241 NDASDFKAVQKAMRVIGFSEEEVESVLSIIAAVLHLGNVEFADNED  286 (1001)
T ss_pred             ccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceEEeecCc
Confidence            4789999999999999999999999999999999999999987654

>KOG0162|consensus

Probab=98.63  E-value=5.8e-08  Score=83.66  Aligned_cols=46  Identities=26%  Similarity=0.450  Sum_probs=43.2

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH   53 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~   53 (144)
                      |++++|+.++.||.++|+..+||..||+++|+|||||||.|...++
T Consensus       249 dd~kdfq~Tl~AM~vIGi~~~eQ~~v~rmva~IL~lGNIsF~Ee~~  294 (1106)
T KOG0162|consen  249 DDRKDFQETLHAMKVIGINQEEQDEVLRMVAGILHLGNISFIEEGN  294 (1106)
T ss_pred             chHHHHHHHHHHheeccCChHHHHHHHHHHHHHHhccceeEEeeCC
Confidence            5689999999999999999999999999999999999999998554

>KOG0161|consensus

Probab=98.34  E-value=1.1e-06  Score=82.80  Aligned_cols=113  Identities=20%  Similarity=0.269  Sum_probs=70.8

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC-CCCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH-GDTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~-~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      |+..+|..+..||+++||+.+|+..||+++++|||+||+.|..... ++....+..      .-.-++..|+++--.|..
T Consensus       317 dd~eef~~t~~a~~ilgfs~~E~~~~~~i~sailhlGn~~f~~~~~~~qa~~~~~~------~a~ka~~llg~~~~~~~~  390 (1930)
T KOG0161|consen  317 DDAEEFQETDEAMDILGFSEEEKISIFRIVSAILHLGNIKFKQEPREEQAEFDNTE------VADKACHLLGINVEEFLK  390 (1930)
T ss_pred             chHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcchhhhccccccccCCCCch------HHHHHHHHcCCCHHHHHH
Confidence            5789999999999999999999999999999999999999987632 222111111      111223333333333321


Q ss_pred             CC-----CCCCC----cceecCChhHHHHHHHHhcCCCHHHHHHHHhhceeee
Q psy9984          87 GS-----HGDTD----SCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITT  130 (144)
Q Consensus        87 ~~-----~~~~~----~~~v~~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~~  130 (144)
                      .-     .-+.+    +-.+......+...|+-+    ++.|..||++|...+
T Consensus       391 al~~priKvg~e~v~k~q~~~q~~~~v~alAk~l----YerlF~wlV~riN~s  439 (1930)
T KOG0161|consen  391 ALLRPRIKVGREWVSKAQNVEQVLFAVEALAKAL----YERLFGWLVKRINKS  439 (1930)
T ss_pred             HhcccceeccchhhhhcchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence            10     00000    000000124567777888    999999999887543

>KOG0160|consensus

Probab=98.13  E-value=1.8e-05  Score=70.18  Aligned_cols=110  Identities=22%  Similarity=0.257  Sum_probs=70.3

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCc------------ccccchhhHHHHHHHHHH
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTD------------SCSFSALDQEVIFRILSS   75 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~------------~~g~~~~~~~~i~~ila~   75 (144)
                      +++.+|..++++|.++|++.++|..||++++++||+||++|......+..            .+|...+.....  +.-.
T Consensus       237 ~d~~e~~~t~~A~~~vgi~~~~q~~if~lla~ilhlGni~f~~~~~~~~~~~~~~~~~~~a~Llg~~~~~l~~~--L~~r  314 (862)
T KOG0160|consen  237 SDAEEFLSTTEAMLFVGISESHQELIFRLLAAILHLGNIQFSSGVEETSSSPVDDHLWTAAELLGCDEEALEQW--LSKR  314 (862)
T ss_pred             ccHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhccCceEeecccccccccccchHHHHHHHHhCCCHHHHHHH--HHHH
Confidence            56899999999999999999999999999999999999999865543211            122222221111  1222


Q ss_pred             HhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCCCHHHHHHHHhhceeee
Q psy9984          76 ILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITT  130 (144)
Q Consensus        76 ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~~  130 (144)
                      .++.++-.+...-       ....-....+..|+.+    ...|..|++.+....
T Consensus       315 ~i~~~~e~i~k~l-------~~~qa~~~rD~lak~i----ys~LFdwlV~~in~s  358 (862)
T KOG0160|consen  315 KILTARESIVKPL-------TLSQAVKRRDALAKQL----YSLLFDWLVAKINGS  358 (862)
T ss_pred             Hhhcccceeeccc-------CHHHHHHhhhhhHHHH----HHHHHHHHHHHhhcc
Confidence            3333322222110       0000123567788888    888999999876543

>KOG0163|consensus

Probab=98.10  E-value=8e-06  Score=71.11  Aligned_cols=108  Identities=17%  Similarity=0.264  Sum_probs=70.9

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCc-----------------ccccchhhHHHHH
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTD-----------------SCSFSALDQEVIF   70 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~-----------------~~g~~~~~~~~i~   70 (144)
                      |+-.+|.++..|+..+|++++|...||+++|+|||||||+|+...+...-                 .+|+...+..  .
T Consensus       312 dD~~dF~rl~~Al~~~Glsd~Ekl~i~s~vA~vLHLGNieFEE~~ddsrGGC~v~n~seqsL~~~a~LLGld~~elr--~  389 (1259)
T KOG0163|consen  312 DDYQDFHRLEKALKLLGLSDTEKLFIWSTVAAVLHLGNIEFEEIPDDSRGGCQVSNGSEQSLTIAAELLGLDQTELR--T  389 (1259)
T ss_pred             ccHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHccccchhcccCcCCCceecccCchhhHHHHHHHhCCCHHHHH--H
Confidence            56799999999999999999999999999999999999999875431111                 2555554433  2


Q ss_pred             HHHHHHhcccCeeeecCCCCCCCccee-cC-----ChhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          71 RILSSILHLGNIQFSGGSHGDTDSCSI-AP-----SSGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        71 ~ila~ILhlGni~F~~~~~~~~~~~~v-~~-----~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      .+++.|+.---        ++..+..+ ++     -...-+..|+-.    +..|..||+.|...
T Consensus       390 ~L~aRvMqtt~--------GG~kGTvIrVPLK~~eA~n~RDALaKai----YSkLFD~lV~~iNq  442 (1259)
T KOG0163|consen  390 GLCARVMQTTK--------GGFKGTVIRVPLKIHEASNARDALAKAI----YSKLFDWLVGRINQ  442 (1259)
T ss_pred             HHHHHHHHhcc--------CCccceEEEeeccHHhhcchHHHHHHHH----HHHHHHHHHHHhhc
Confidence            34555554211        01111111 11     112345666667    78888999887643

>KOG4229|consensus

Probab=97.24  E-value=0.00041  Score=63.09  Aligned_cols=77  Identities=21%  Similarity=0.318  Sum_probs=62.9

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      ++..+|.++..+|.++||...++..||++++++||+||+.|......+.+...+....   .+..+|.+|.++--.|.+.
T Consensus       292 ~~~~~~~~l~~~m~v~~f~~~~~~si~~~la~il~~gni~~~~~~~~~~d~~~v~~~~---~v~~vA~lL~~~~~~l~~a  368 (1062)
T KOG4229|consen  292 DDVAQFIRLEAAMSVVGFTDKVLGSIFKSLAAILHIGNISYIKFALDQQDSAEVENEE---AVERVACLLLIKEKLLQEA  368 (1062)
T ss_pred             HHHHhHHHHHHHHHHhccchhHHHHHHHhcccceeecceeHHhhhcccccchhcccch---HHHHHHHHhhcCHHHhhhh
Confidence            4578999999999999999999999999999999999999876554455555555544   7889999999887666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	144
1w8j_A	766	Crystal Structure Of Myosin V Motor Domain - Nucleo		3e-13
1oe9_A	795	Crystal Structure Of Myosin V Motor With Essential		3e-13
2dfs_A	1080	3-D Structure Of Myosin-V Inhibited State Length =		3e-13
2bki_A	858	Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St		1e-04
4anj_A	1052	Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St		1e-04
4dbp_A	814	Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal		1e-04
2bkh_A	814	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		1e-04
3l9i_A	814	Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant		1e-04
4e7z_A	798	Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F		1e-04
4dbq_A	788	Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos		1e-04
2x51_A	789	M6 Delta Insert1 Length = 789		1e-04
2vas_A	788	Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo		1e-04
4dbr_A	786	Myosin Vi D179y (md) Pre-powerstroke State Length =		1e-04
4e7s_A	798	Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat		1e-04
2v26_A	784	Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L		1e-04
4a7f_C	697	Structure Of The Actin-Tropomyosin-Myosin Complex (		3e-04
1lkx_A	697	Motor Domain Of Myoe, A Class-I Myosin Length = 697		3e-04

>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377
Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377
Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 66  QEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTH 125
           Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E    L H
Sbjct: 322 QMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMAHWLCH 377
Query: 126 RKITTMQESFNKPMS 140
           RK+ T  E++ KP+S
Sbjct: 378 RKLATATETYIKPIS 392

>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 337 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 393
Query: 127 KITT 130
            + T
Sbjct: 394 VMLT 397

>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 337 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 393
Query: 127 KITT 130
            + T
Sbjct: 394 VMLT 397

>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
Query: 127 KITT 130
            + T
Sbjct: 393 VMLT 396

>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
Query: 127 KITT 130
            + T
Sbjct: 393 VMLT 396

>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 392
Query: 127 KITT 130
            + T
Sbjct: 393 VMLT 396

>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 346 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 402
Query: 127 KITT 130
            + T
Sbjct: 403 VMLT 406

>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 310 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 366
Query: 127 KITT 130
            + T
Sbjct: 367 VMLT 370

>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 311 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 367
Query: 127 KITT 130
            + T
Sbjct: 368 VMLT 371

>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 310 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 366
Query: 127 KITT 130
            + T
Sbjct: 367 VMLT 370

>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 334 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 390
Query: 127 KITT 130
            + T
Sbjct: 391 VMLT 394

>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 346 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 402
Query: 127 KITT 130
            + T
Sbjct: 403 VMLT 406

>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 69  IFRILSSILHLGNIQF--SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHR 126
           +FR+++ +LHLGNI F  +G + G    C++   S     +C  L  +D+D+ R  LT R
Sbjct: 333 LFRVVAGVLHLGNIDFEEAGSTSG---GCNLKNKSTQALEYCAELLGLDQDDLRVSLTTR 389
Query: 127 KITT 130
            + T
Sbjct: 390 VMLT 393

>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 65  DQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPS-SGSLAAFCDILYNIDRDEFRRCL 123
           DQ  I+RIL++ILH+GNI F+  +   T + ++  S + SLAA    L   D+      L
Sbjct: 262 DQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCL-KTDQQSLSIAL 320
Query: 124 THRKITT 130
            +R I+T
Sbjct: 321 CYRSIST 327

>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 65  DQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPS-SGSLAAFCDILYNIDRDEFRRCL 123
           DQ  I+RIL++ILH+GNI F+  +   T + ++  S + SLAA    L   D+      L
Sbjct: 262 DQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCL-KTDQQSLSIAL 320
Query: 124 THRKITT 130
            +R I+T
Sbjct: 321 CYRSIST 327

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	144
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-19
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-07
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	5e-19
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	1e-07
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	7e-18
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	8e-18
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	2e-17
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	5e-17
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	7e-17
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	2e-16
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	3e-16
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	3e-05
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	1e-15
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	4e-06

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 83.2 bits (206), Expect = 1e-19
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
            S   Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E  
Sbjct: 317 ISDSYQMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMA 372

Query: 121 RCLTHRKITTMQESFNKPMSV 141
             L HRK+ T  E++ KP+S 
Sbjct: 373 HWLCHRKLATATETYIKPISK 393

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 16/23 (69%), Positives = 18/23 (78%)

Query: 2   EPAVLYNLQVRFCQHNAIYTYCG 24
           EPAVL+NL+VRF     IYTYCG
Sbjct: 82  EPAVLHNLKVRFIDSKLIYTYCG 104

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795

 Score = 81.2 bits (201), Expect = 5e-19
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
            S   Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD++  +D +E  
Sbjct: 317 ISDSYQMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCDLM-GVDYEEMA 372

Query: 121 RCLTHRKITTMQESFNKPMSV 141
             L HRK+ T  E++ KP+S 
Sbjct: 373 HWLCHRKLATATETYIKPISK 393

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 16/23 (69%), Positives = 18/23 (78%)

Query: 2   EPAVLYNLQVRFCQHNAIYTYCG 24
           EPAVL+NL+VRF     IYTYCG
Sbjct: 82  EPAVLHNLKVRFIDSKLIYTYCG 104

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 77.8 bits (192), Expect = 7e-18
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +   + R++S++L  GNI      + D    +  P + +    C +L  +   +F 
Sbjct: 312 FSHEEIISMLRMVSAVLQFGNIALKRERNTD---QATMPDNTAAQKLCRLL-GLGVTDFS 367

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           R L   +I   ++   K  + 
Sbjct: 368 RALLTPRIKVGRDYVQKAQTK 388

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 78.0 bits (192), Expect = 8e-18
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           F+  +Q  I R++SS+L LGNI F           +  P + +    C ++  I+  +F 
Sbjct: 343 FTEEEQTSILRVVSSVLQLGNIVF---KKERNTDQASMPDNTAAQKVCHLM-GINVTDFT 398

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           R +   +I   ++   K  + 
Sbjct: 399 RSILTPRIKVGRDVVQKAQTK 419

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783

 Score = 76.5 bits (189), Expect = 2e-17
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           F++ ++  ++++  +I+H GN++F        +  +    +        ++  ++  +  
Sbjct: 341 FTSEEKNSMYKLTGAIMHFGNMKFKL---KQREEQAEPDGTEEADKSAYLM-GLNSADLL 396

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           + L H ++    E   K  +V
Sbjct: 397 KGLCHPRVKVGNEYVTKGQNV 417

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 75.5 bits (186), Expect = 5e-17
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +Q  IF+I++ ILHLGNI+F     G  +   +     +L A   +   ++     
Sbjct: 336 FSQEEQMSIFKIIAGILHLGNIKF---EKGAGEGAVL-KDKTALNAASTVF-GVNPSVLE 390

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           + L   +I   ++   + ++V
Sbjct: 391 KALMEPRILAGRDLVAQHLNV 411

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 75.1 bits (185), Expect = 7e-17
 Identities = 13/81 (16%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           F+  +++ +F+  +SILH+G ++F        +  + +  +        +   I+  +  
Sbjct: 340 FTKEEKQSMFKCTASILHMGEMKF---KQRPREEQAESDGTAEAEKVAFLC-GINAGDLL 395

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           + L   K+    E   K  ++
Sbjct: 396 KALLKPKVKVGTEMVTKGQNM 416

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +Q  IF+I++ ILHLGNI+F     G  +   +     +L A   +   ++     
Sbjct: 336 FSQEEQMSIFKIIAGILHLGNIKFEK---GAGEGAVL-KDKTALNAASTVF-GVNPSVLE 390

Query: 121 RCLTHRKITTMQESFNKPMSV 141
           + L   +I   ++   + ++V
Sbjct: 391 KALMEPRILAGRDLVAQHLNV 411

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697

 Score = 73.4 bits (181), Expect = 3e-16
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 61  FSALDQEVIFRILSSILHLGNIQF-SGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEF 119
               DQ  I+RIL++ILH+GNI F          +      + SLAA    L   D+   
Sbjct: 258 LKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCL-KTDQQSL 316

Query: 120 RRCLTHRKITTMQ----ESFNKPMSV 141
              L +R I+T         + PM  
Sbjct: 317 SIALCYRSISTGVGKRCSVISVPMDC 342

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          E A + NL +R  + + IYTY G
Sbjct: 21 ENAFIENLTMRH-KSDNIYTYIG 42

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
               ++  +FR+++ +LHLGNI F               S+ +L    ++L  +D+D+ R
Sbjct: 325 LDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELL-GLDQDDLR 383

Query: 121 RCLTHRKITTMQ-----ESFNKPMSV 141
             LT R + T            P+ V
Sbjct: 384 VSLTTRVMLTTAGGAKGTVIKVPLKV 409

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          E  +L+N++VR+   + IYTY  
Sbjct: 66 EATLLHNIKVRY-SKDRIYTYVA 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	99.89
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	99.88
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	99.88
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	99.88
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	99.88
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	99.87
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	99.87
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	99.87
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	99.87
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	99.84
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	99.84
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	98.96
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	98.91
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	98.9
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	98.87
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	98.87
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	98.85
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	98.84
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	98.83
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	98.83
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	98.81
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.79

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=99.89  E-value=2.3e-25  Score=193.18  Aligned_cols=138  Identities=33%  Similarity=0.513  Sum_probs=108.0

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      -|+||||+|||++++++.+     ++|..               .+|+ +|||+.+.+.        |+|.+.       
T Consensus       210 kT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~~~~~y~yl~  289 (795)
T 1w7j_A          210 KTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTK  289 (795)
T ss_dssp             CCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHHHH
T ss_pred             cCCCCCCccccceEEEEEECCCCCEeeeeceEEecccceEeccCCCCCchHhHHHHHcCCCHHHHHHccCCChHhCcccc
Confidence            4899999999999987754     33333               3455 6999877654        344322       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           .+.+.++.+.+        .+||+++++..||+++|||||||||+|....   .+.|.+..+++.++.+|+|| |
T Consensus       290 ~~~~~~~~~~dD~~~f~~~~~Am~~lG~s~~e~~~i~~ilaaILhLGNi~F~~~~---~~~~~v~~~~~~l~~~a~LL-g  365 (795)
T 1w7j_A          290 QGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRD---SDSCAIPPKHDPLTIFCDLM-G  365 (795)
T ss_dssp             TTSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEE---TTEEECCTTCHHHHHHHHHH-T
T ss_pred             CCCCCcCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEeecC---CcceeecCChHHHHHHHHHh-C
Confidence                 22222221111        5999999999999999999999999998763   46677756778999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.++||.+++|++++|+
T Consensus       366 v~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA  396 (795)
T 1w7j_A          366 VDYEEMAHWLCHRKLATATETYIKPISKLHA  396 (795)
T ss_dssp             CCHHHHHHHHSEEEEECSSCEEEEECCHHHH
T ss_pred             CCHHHHHHHhcccEEEeCCceecCCCCHHHH
Confidence            9999999999999999999999999999874

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=99.88  E-value=3.6e-25  Score=192.87  Aligned_cols=138  Identities=15%  Similarity=0.224  Sum_probs=101.6

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhc-CC-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHL-GN-------   45 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~l-Gn-------   45 (144)
                      -|+||||+|||++++++.+     ++|..               .+|+ +|||+.+.+.        |+| ++       
T Consensus       233 kT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yL  312 (837)
T 1kk8_A          233 KTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFI  312 (837)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTTT
T ss_pred             cCCCCCCCCCceeEEEEEECCCCCEeeeEEEEEeccCceeeeecCCCCceeehHHHHcCCCHHHHHHhCCCCChhhcccc
Confidence            3899999999999987754     23333               3455 7999877543        445 32       


Q ss_pred             ----eeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          46 ----IQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        46 ----i~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                          +.+.+.+|.+.+        .+||+.+++..||+++|||||||||+|....  +++.+.+ .+.+.++.+|+|| |
T Consensus       313 ~~g~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilAaILhLGNi~F~~~~--~~~~~~~-~~~~~l~~~a~LL-g  388 (837)
T 1kk8_A          313 NQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP--REEQAES-DGTAEAEKVAFLC-G  388 (837)
T ss_dssp             CSSCSCBTTBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC------CCCEE-SCSHHHHHHHHHH-T
T ss_pred             cCCCcccCCcChHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHhhccceEEecC--CCCcccc-CCHHHHHHHHHHH-C
Confidence                222222221111        5999999999999999999999999998764  3456666 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+++|++++|+
T Consensus       389 v~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA  419 (837)
T 1kk8_A          389 INAGDLLKALLKPKVKVGTEMVTKGQNMNQV  419 (837)
T ss_dssp             SCHHHHHHHHHSCEEC----CEECCCCHHHH
T ss_pred             CCHHHHHHHhcCcEEEcCCceEEeCCCHHHH
Confidence            9999999999999999999999999999874

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=99.88  E-value=6.5e-25  Score=195.64  Aligned_cols=138  Identities=34%  Similarity=0.523  Sum_probs=104.1

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      -|++|||+|||++++++.+     ++|..               .+|+ +||||.+.+.        |+|++.       
T Consensus       210 kT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEKsRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~yl~  289 (1080)
T 2dfs_A          210 KTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTK  289 (1080)
T ss_dssp             EETTEEEEECSEEEEEEEECTTCCEEEEEEEEECCCCGGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTTTS
T ss_pred             cCCCCCCccccceeEEEEECCCCCEeeecceeEeecCceeeccCCCCCcchhHHHHHcCCChHHHHHccCCCHHhcCccc
Confidence            3899999999999987754     23332               3455 7999877654        344332       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           .+.+.+|...+        .+||+++++..||+++|||||||||+|...   +.+.|.+..+++.++.+|.|| |
T Consensus       290 ~~~~~~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~---~~~~~~~~~~~~~l~~~a~LL-g  365 (1080)
T 2dfs_A          290 QGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASR---DSDSCAIPPKHDPLTIFCDLM-G  365 (1080)
T ss_dssp             TTSCCSCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEE---TTTEEECCSSCHHHHHHHHHH-T
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEEec---CCcceeecCChHHHHHHHHHh-C
Confidence                 12221211111        599999999999999999999999999876   356677756788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.++||.+++|++++|+
T Consensus       366 v~~~~L~~~l~~~~~~~~~e~i~~~~~~~qa  396 (1080)
T 2dfs_A          366 VDYEEMAHWLCHRKLATATETYIKPISKLHA  396 (1080)
T ss_dssp             CCHHHHHHHHHEEEECC----EEEECCHHHH
T ss_pred             CCHHHHHHHhcccEEEeCCceEEeCCCHHHH
Confidence            9999999999999999999999999999874

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...

Probab=99.88  E-value=1.1e-24  Score=188.08  Aligned_cols=137  Identities=25%  Similarity=0.360  Sum_probs=106.2

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCC--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGN--------   45 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGn--------   45 (144)
                      -|+||||+|||++++++.+     ++|..               .+|+ +|||+.+.+.        |+|.+        
T Consensus       229 kT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~yLLEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~y~yll  308 (770)
T 1w9i_A          229 KTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLN  308 (770)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCTTTS
T ss_pred             cCCCCCCcCCcceEEEEEECCCCCEeeeEEEEEeccCceeecccCCCCcchhHHHHhcCCCHHHHHHhCCCChhhccccc
Confidence            4899999999999887754     22322               3455 7999777553        34433        


Q ss_pred             ----eeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          46 ----IQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        46 ----i~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                          +.+.+.++.+.+        .+||+++++..||+++|||||||||+|...   +++.+.+ .+.+.++.+|+|| |
T Consensus       309 ~~g~~~~~~~dD~~~f~~~~~Am~~lGf~~~e~~~i~~ilaaILhLGNi~F~~~---~~~~~~~-~~~~~l~~~a~LL-g  383 (770)
T 1w9i_A          309 QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG---AGEGAVL-KDKTALNAASTVF-G  383 (770)
T ss_dssp             SSSCCCCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCEEC---SSSSEEC-SCCHHHHHHHHHH-T
T ss_pred             cCCccccCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCceEecC---CCCcccc-CChHHHHHHHHHh-C
Confidence                222222221111        599999999999999999999999999832   3555666 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+++|++++|+
T Consensus       384 v~~~~L~~aL~~~~~~~~~e~v~~~~~~~qA  414 (770)
T 1w9i_A          384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKS  414 (770)
T ss_dssp             CCHHHHHHHHHSCEEEETTEEEECCCCHHHH
T ss_pred             CCHHHHHHHhhCcEEEeCCeeEEeCCCHHHH
Confidence            9999999999999999999999999999874

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=99.88  E-value=1.8e-24  Score=191.63  Aligned_cols=137  Identities=22%  Similarity=0.302  Sum_probs=107.0

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~l----------   43 (144)
                      -|++|||+|||++++++.+     ++|..               .+|+ +||||.+.+.        |+|          
T Consensus       207 kT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~  286 (995)
T 2ycu_A          207 KTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFLT  286 (995)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHTTCCCGGGCTTST
T ss_pred             cCCCCCCCCccceEEEEEECCCCCEeeeEEEEEeccCCeeeccCCCCCcchhHHHHHcCCCHHHHHHcCCCChHHccccc
Confidence            3899999999999987754     33333               3454 7999877554        344          


Q ss_pred             -CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCC
Q psy9984          44 -GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNI  114 (144)
Q Consensus        44 -Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv  114 (144)
                       |++...+ ++.+.+        .+||+++++..||+++|||||||||+|....  +++.+.+ .+.+.++.+|.|| ||
T Consensus       287 ~~~~~~~~-dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhlGni~F~~~~--~~~~~~~-~~~~~l~~~a~LL-gv  361 (995)
T 2ycu_A          287 NGPSSSPG-QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRER--NTDQATM-PDNTAAQKLCRLL-GL  361 (995)
T ss_dssp             TCSCSSTT-THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHGGGCCCEECS--SSCCEEC-SCCHHHHHHHHHT-TC
T ss_pred             CCccccCC-cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecC--CCccccc-CChHHHHHHHHHH-CC
Confidence             3322222 111111        5999999999999999999999999998764  3455665 6788999999999 99


Q ss_pred             CHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         115 DRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       115 ~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++++|.++||+|++.+++|.+++|++++|+
T Consensus       362 ~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa  391 (995)
T 2ycu_A          362 GVTDFSRALLTPRIKVGRDYVQKAQTKEQA  391 (995)
T ss_dssp             CHHHHHHHHHSCEEESSSSEEECCCCHHHH
T ss_pred             CHHHHHHHhcCcEEEcCCceecCCCCHHHH
Confidence            999999999999999999999999999874

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9

Probab=99.87  E-value=7.6e-25  Score=187.80  Aligned_cols=140  Identities=25%  Similarity=0.275  Sum_probs=100.5

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcC-Ce------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLG-NI------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lG-ni------   46 (144)
                      -|+||||+|||++++++.+     ++|..               .+|+ +|||+.+.+.        |+|. +.      
T Consensus       150 kT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~yLLEKSRVv~q~~gERnfHIFYqllaG~~~~~~~~l~L~~~~~~y~yL  229 (697)
T 1lkx_A          150 KTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYL  229 (697)
T ss_dssp             CCSSCSSCBCSEEEEEEEECTTCCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHTTSCHHHHHHHTCCSCGGGSHHH
T ss_pred             ccCCCCCcchhheeEEEEECCCCCEeeeeeeeeeccCceeeeecCCCCceeehhHHhcCCCHHHHHHhcCCCChhhCccc
Confidence            4899999999999987754     22222               3455 7999877543        4553 22      


Q ss_pred             ------eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecC--CCCCCCcceecCChhHHHHHHHH
Q psy9984          47 ------QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGG--SHGDTDSCSIAPSSGSLAAFCDI  110 (144)
Q Consensus        47 ------~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~--~~~~~~~~~v~~~~~~l~~~a~L  110 (144)
                            ...+.++.+.+        .+||+++++..||+++|||||||||+|...  ..++.+.|.+ .+.+.++.+|+|
T Consensus       230 ~~~~~~~~~~~dD~~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~v-~~~~~l~~~a~L  308 (697)
T 1lkx_A          230 KKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKV-SDTKSLAAAASC  308 (697)
T ss_dssp             HHTTCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC----CEEEE-SSHHHHHHHHHH
T ss_pred             cCCCCcccCCCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccceEeecccccCCCCccee-CCHHHHHHHHHh
Confidence                  22222221111        599999999999999999999999999872  1113366777 688999999999


Q ss_pred             hcCCCHHHHHHHHhhceeeeC----CcEEEecCCccCC
Q psy9984         111 LYNIDRDEFRRCLTHRKITTM----QESFNKPMSVFEM  144 (144)
Q Consensus       111 L~gv~~~~L~~aLt~r~~~~~----ge~i~~~ls~~q~  144 (144)
                      | ||++++|.++||+|++.++    ||.+.+|++++|+
T Consensus       309 L-gv~~~~L~~~L~~r~~~~~~g~~~e~i~~~l~~~qA  345 (697)
T 1lkx_A          309 L-KTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQA  345 (697)
T ss_dssp             H-TSCHHHHHHHHHBCC----------CCCCBCCHHHH
T ss_pred             h-CCCHHHHHHHHhccEEeeccCCCCCeEEecCCHHHH
Confidence            9 9999999999999999999    9999999999874

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*

Probab=99.87  E-value=7.5e-25  Score=189.59  Aligned_cols=138  Identities=15%  Similarity=0.263  Sum_probs=100.9

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~l----------   43 (144)
                      -|+||||+|||++++++.+     ++|..               .+|+ +|||+.+.+.        |+|          
T Consensus       234 kT~rNdNSSRFGK~i~i~F~~~g~i~Ga~I~~YLLEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~~y~yl  313 (783)
T 4db1_A          234 KTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFI  313 (783)
T ss_dssp             CCSSCTTEECSEEEEEEEECTTSBEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHTCSSHHHHHHTTCCSCGGGCGGG
T ss_pred             ccCCCCCCCccceeEEEEECCCCCEeeeEEEEeecccceeeccCCCCCcchhHHHHHcCCCHHHHHHhccCCCHHHCccc
Confidence            4899999999999988754     23332               3455 7999877543        334          


Q ss_pred             --CCeeeecCCCCCC--------cccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 --GNIQFSGGSHGDT--------DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 --Gni~f~~~~~~~~--------~~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                        |++.+.+.++.+.        ..+||+++++..||+++|||||||||+|....  +++.+.+ .+.+.++.+|+|| |
T Consensus       314 ~~g~~~~~~~dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilaaILhLGNi~F~~~~--~~~~~~~-~~~~~l~~~a~LL-g  389 (783)
T 4db1_A          314 SQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQ--REEQAEP-DGTEEADKSAYLM-G  389 (783)
T ss_dssp             CSSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECT--TSSCEEE-SCCHHHHHHHHHT-T
T ss_pred             cCCCcccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceeeccC--CCccccc-CChHHHHHHHHHh-C
Confidence              2222222222111        26999999999999999999999999998764  3445555 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+++|++++|+
T Consensus       390 v~~~~L~~aL~~~~i~~~~e~v~~~~~~~qA  420 (783)
T 4db1_A          390 LNSADLLKGLCHPRVKVGNEYVTKGQNVQQV  420 (783)
T ss_dssp             CCHHHHHHHHHSCC------CCCCCCCHHHH
T ss_pred             CCHHHHHHhhcceEEEeCCeeEeeCCCHHHH
Confidence            9999999999999999999999999999874

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=99.87  E-value=1.4e-24  Score=195.31  Aligned_cols=138  Identities=24%  Similarity=0.367  Sum_probs=107.7

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~l----------   43 (144)
                      -|++|||+||||+++++.+     ++|..               .+|+ +||||.+.+.        |+|          
T Consensus       237 kT~rN~NSSRfgk~~~i~f~~~g~i~ga~i~~ylLEksRv~~q~~~ErnfhiFYqll~g~~~~~~~~l~l~~~~~~~yl~  316 (1184)
T 1i84_S          237 KTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLS  316 (1184)
T ss_dssp             EETTEEEEECSCEEEEEEECSSSCEEEEEEEECCCCCGGGSCCCTTCCCCTHHHHHHHHCCHHHHHHTTCCCTTSCSSCT
T ss_pred             cCCCCccccccceeEEEEECCCCCEeeeEEeEeecCCceeeeecCCCCchhhHHHHHcCCCHHHHHHcCCCChHhCCccC
Confidence            3899999999999987754     23333               3455 7999877553        334          


Q ss_pred             -CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCC
Q psy9984          44 -GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNI  114 (144)
Q Consensus        44 -Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv  114 (144)
                       |++.+.+.++...+        .+||+.+++..||+++|||||||||+|....  +++.+.+ .+.+.++.+|.|| ||
T Consensus       317 ~~~~~~~~~~d~~~f~~~~~a~~~lg~~~~e~~~i~~ilaaiLhlGni~f~~~~--~~~~~~~-~~~~~~~~~a~lL-g~  392 (1184)
T 1i84_S          317 NGHVPIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKER--NTDQASM-PDNTAAQKVCHLM-GI  392 (1184)
T ss_dssp             TSSCCCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTTCCCBCCT--TTSCCBC-CCSHHHHHHHHHT-TS
T ss_pred             CCCcCCCCCChHHHHHHHHHHHHhceeCHHHHHHHHHHHHHHHhhcCceeeccC--CCcCccc-CChHHHHHHHHHH-CC
Confidence             33322222222212        5999999999999999999999999998764  3455666 6788999999999 99


Q ss_pred             CHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         115 DRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       115 ~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++++|.++||+|++.+++|.+++|++++|+
T Consensus       393 ~~~~l~~~l~~~~~~~~~e~~~~~~~~~~a  422 (1184)
T 1i84_S          393 NVTDFTRSILTPRIKVGRDVVQKAQTKEQA  422 (1184)
T ss_dssp             CHHHHHHHHHSCCCCCTTSCCCCCCCHHHH
T ss_pred             CHHHHHHHhcCcEEEeCCceEecCCCHHHH
Confidence            999999999999999999999999998874

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=99.87  E-value=4.1e-24  Score=189.34  Aligned_cols=137  Identities=25%  Similarity=0.355  Sum_probs=107.2

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCC--------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGN--------   45 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGn--------   45 (144)
                      -|++|||||||++++++.+     ++|..               .+|+ +||||.+.+.        |+|.+        
T Consensus       229 kT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yLLEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~  308 (1010)
T 1g8x_A          229 KTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLN  308 (1010)
T ss_dssp             CCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHHTCCCGGGCGGGS
T ss_pred             cCCCCCCccccceEEEEEECCCCCCcceEEEEEEcCCceeeeecCCCCcchhHHHHHcCCCHHHHHHhCCCChHhcchhc
Confidence            4899999999999987754     23332               3455 7999877553        34432        


Q ss_pred             ----eeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          46 ----IQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        46 ----i~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                          +...+.++.+.+        .+||+.+++..||+++|||||||||+|....   .+.+.+ .+.+.++.+|.|| |
T Consensus       309 ~~~~~~~~~~dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~---~~~~~~-~~~~~l~~~a~LL-g  383 (1010)
T 1g8x_A          309 QSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGA---GEGAVL-KDKTALNAASTVF-G  383 (1010)
T ss_dssp             SSSCCCCBTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTTCCCBCCT---TSSCBC-SCCHHHHHHHHHH-T
T ss_pred             CCCccccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccceEEecC---CCcccc-CChHHHHHHHHHH-C
Confidence                222222222222        5999999999999999999999999998764   256666 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++||+|++.+++|.+++|++++|+
T Consensus       384 v~~~~L~~~l~~~~~~~~~e~v~~~~~~~qa  414 (1010)
T 1g8x_A          384 VNPSVLEKALMEPRILAGRDLVAQHLNVEKS  414 (1010)
T ss_dssp             SCHHHHHHHHHSCEEESSSSEEECCCCSHHH
T ss_pred             CCHHHHHHHHhCcEEEeCCeeEEeCCCHHHH
Confidence            9999999999999999999999999999874

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*

Probab=99.84  E-value=3.2e-23  Score=179.75  Aligned_cols=85  Identities=25%  Similarity=0.509  Sum_probs=68.5

Q ss_pred             ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceec-CChhHHHHHHHHhcCCCHHHHHHHHhhceee-----eC
Q psy9984          58 SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIA-PSSGSLAAFCDILYNIDRDEFRRCLTHRKIT-----TM  131 (144)
Q Consensus        58 ~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~-~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~-----~~  131 (144)
                      .+||+++++..||+++|||||||||+|.+.. +..++|.+. .+.+.++.+|+|| ||++++|.++||+|++.     ++
T Consensus       322 ~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~-~~~~~~~v~~~~~~~l~~~a~LL-gv~~~~L~~aL~~r~~~t~~g~~~  399 (784)
T 2v26_A          322 KIGLDDEEKLDLFRVVAGVLHLGNIDFEEAG-STSGGCNLKNKSTQALEYCAELL-GLDQDDLRVSLTTRVMLTTAGGAK  399 (784)
T ss_dssp             HTTCCHHHHHHHHHHHHHHHHHHTCCEEECT-TTTSSEEECGGGHHHHHHHHHHH-TCCHHHHHHHHHEEEC--------
T ss_pred             HcCCCHHHHHHHHHHHHHHHhcccceeeecc-CCCCccccccCCHHHHHHHHHHh-CCCHHHHHHHHhhcEEeccccCCC
Confidence            5999999999999999999999999998742 123456663 2467899999999 99999999999999998     67


Q ss_pred             CcEEEecCCccCC
Q psy9984         132 QESFNKPMSVFEM  144 (144)
Q Consensus       132 ge~i~~~ls~~q~  144 (144)
                      ||.+++|++++|+
T Consensus       400 ge~i~~~l~~~qA  412 (784)
T 2v26_A          400 GTVIKVPLKVEQA  412 (784)
T ss_dssp             ---CEEECCHHHH
T ss_pred             CCeEeecCCHHHH
Confidence            9999999999874

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=99.84  E-value=3e-23  Score=183.98  Aligned_cols=85  Identities=25%  Similarity=0.506  Sum_probs=62.7

Q ss_pred             ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceec-CChhHHHHHHHHhcCCCHHHHHHHHhhceee-----eC
Q psy9984          58 SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIA-PSSGSLAAFCDILYNIDRDEFRRCLTHRKIT-----TM  131 (144)
Q Consensus        58 ~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~-~~~~~l~~~a~LL~gv~~~~L~~aLt~r~~~-----~~  131 (144)
                      .+||+++++..||+++|||||||||+|.+... .++.+.+. .+.+.++.+|+|| ||++++|.++||+|++.     ++
T Consensus       326 ~lGfs~~e~~~I~~iLAaILhLGNi~F~~~~~-~~~~~~~~~~~~~~l~~~a~LL-gv~~~~L~~aLt~r~~~~~~~~~~  403 (1052)
T 4anj_A          326 KIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGS-TSGGCNLKNKSTQALEYCAELL-GLDQDDLRVSLTTRVMLTTAGGAK  403 (1052)
T ss_dssp             HHTCCHHHHHHHHHHHHHHHHHHTCCEEC--------CEECGGGHHHHHHHHHHT-TCCHHHHHHHHHEEC---------
T ss_pred             HcCCCHHHHHHHHHHHHHHHhhcceeEEecCC-CCCCcccccCChHHHHHHHHHh-CCCHHHHHHHHhhceeeecccccC
Confidence            58999999999999999999999999987542 22334442 3457899999999 99999999999999875     57


Q ss_pred             CcEEEecCCccCC
Q psy9984         132 QESFNKPMSVFEM  144 (144)
Q Consensus       132 ge~i~~~ls~~q~  144 (144)
                      ||.+.+|++++|+
T Consensus       404 ~e~i~~~l~~~qA  416 (1052)
T 4anj_A          404 GTVIKVPLKVEQA  416 (1052)
T ss_dssp             ----CEECCHHHH
T ss_pred             ceEEEecCCHHHH
Confidence            8999999999874

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9

Probab=98.96  E-value=2.2e-09  Score=92.35  Aligned_cols=114  Identities=23%  Similarity=0.239  Sum_probs=75.1

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCC--CCCCcccccchhhHHHHHHHHHHHhcccCeeee
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGS--HGDTDSCSFSALDQEVIFRILSSILHLGNIQFS   85 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~--~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~   85 (144)
                      |+.++|.++++||.++||+.+|+..||+++|+||||||++|....  ....+...+.+.+   .+..+|.+|-+..-++.
T Consensus       241 dD~~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~v~~~~---~l~~~a~LLgv~~~~L~  317 (697)
T 1lkx_A          241 DDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTK---SLAAAASCLKTDQQSLS  317 (697)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC----CEEEESSHH---HHHHHHHHHTSCHHHHH
T ss_pred             chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcccceEeecccccCCCCcceeCCHH---HHHHHHHhhCCCHHHHH
Confidence            678999999999999999999999999999999999999998721  1111233333322   45666666665443332


Q ss_pred             cC----C-CCC----CCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          86 GG----S-HGD----TDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        86 ~~----~-~~~----~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      ..    . ..+    .+.....-+    ....+.+|+-|    ++.|..||+.|..
T Consensus       318 ~~L~~r~~~~~~g~~~e~i~~~l~~~qA~~~rdalaK~l----Y~rLF~wlV~~IN  369 (697)
T 1lkx_A          318 IALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKAL----YERLFNWLVSKIN  369 (697)
T ss_dssp             HHHHBCC----------CCCCBCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             HHHhccEEeeccCCCCCeEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            11    0 001    121111111    24568899999    9999999987764

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=98.91  E-value=2e-09  Score=96.04  Aligned_cols=115  Identities=13%  Similarity=0.182  Sum_probs=73.4

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCC-CCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHG-DTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~-~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      |+..+|.++++||.++||+.+|+..||++||+|||||||+|...... ....+.....   ..+..+|.+|.+..-++..
T Consensus       312 dD~~~f~~~~~Am~~lGfs~~e~~~I~~iLAaILhLGNi~F~~~~~~~~~~~~~~~~~---~~l~~~a~LLgv~~~~L~~  388 (1052)
T 4anj_A          312 DDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKST---QALEYCAELLGLDQDDLRV  388 (1052)
T ss_dssp             CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCEEC-------CEECGGGH---HHHHHHHHHTTCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCCCCCcccccCCh---HHHHHHHHHhCCCHHHHHH
Confidence            57899999999999999999999999999999999999999764332 1112222222   2455666666654333211


Q ss_pred             C----------CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          87 G----------SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        87 ~----------~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      .          ....++.....-+    ....+.+|+-|    ++.|..||+.|...
T Consensus       389 aLt~r~~~~~~~~~~~e~i~~~l~~~qA~~~rDaLAK~L----Y~rLF~wiV~~IN~  441 (1052)
T 4anj_A          389 SLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTV----YSHLFDHVVNRVNQ  441 (1052)
T ss_dssp             HHHEEC-------------CEECCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHT
T ss_pred             HHhhceeeecccccCceEEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHhhhc
Confidence            0          0001222222112    24578899999    99999999987643

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*

Probab=98.90  E-value=2.1e-09  Score=93.34  Aligned_cols=113  Identities=10%  Similarity=0.211  Sum_probs=72.5

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|..+++||.++||+.+|+..||+++|+||||||++|........  ..+...+   .+..+|.+|-+..-++...
T Consensus       324 dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilaaILhLGNi~F~~~~~~~~--~~~~~~~---~l~~~a~LLgv~~~~L~~a  398 (783)
T 4db1_A          324 DDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQ--AEPDGTE---EADKSAYLMGLNSADLLKG  398 (783)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSSC--EEESCCH---HHHHHHHHTTCCHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceeeccCCCcc--cccCChH---HHHHHHHHhCCCHHHHHHh
Confidence            6789999999999999999999999999999999999999987543211  1111111   2344455544433222110


Q ss_pred             ----C-CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 ----S-HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ----~-~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                          . .-+.+......+    ....+.+|+-|    ++.|..||+.|...
T Consensus       399 L~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~l----Y~rLF~wlV~~IN~  445 (783)
T 4db1_A          399 LCHPRVKVGNEYVTKGQNVQQVIYATGALAKAV----YERMFNWMVTRINA  445 (783)
T ss_dssp             HHSCC------CCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred             hcceEEEeCCeeEeeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence                0 001111111011    24578899999    99999999987643

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*

Probab=98.87  E-value=5e-09  Score=91.16  Aligned_cols=116  Identities=14%  Similarity=0.240  Sum_probs=75.8

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.++++||.++||+.+|+..||+++|+||||||++|....+. .....+.... ...+..+|.+|-+..-++...
T Consensus       308 dD~~~f~~~~~Am~~lG~~~~e~~~i~~ilaaILhLGNi~F~~~~~~-~~~~~v~~~~-~~~l~~~a~LLgv~~~~L~~a  385 (784)
T 2v26_A          308 DDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST-SGGCNLKNKS-TQALEYCAELLGLDQDDLRVS  385 (784)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCEEECTTT-TSSEEECGGG-HHHHHHHHHHHTCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccceeeeccCC-CCccccccCC-HHHHHHHHHHhCCCHHHHHHH
Confidence            67899999999999999999999999999999999999999874221 1112222111 224566666666543333110


Q ss_pred             ------CC----CCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 ------SH----GDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ------~~----~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                            ..    ..++.....-+    ....+.+|+-|    ++.|..||+.|...
T Consensus       386 L~~r~~~t~~g~~~ge~i~~~l~~~qA~~~rdalaK~l----Y~rLF~wlV~~IN~  437 (784)
T 2v26_A          386 LTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTV----YSHLFDHVVNRVNQ  437 (784)
T ss_dssp             HHEEEC-----------CEEECCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHT
T ss_pred             HhhcEEeccccCCCCCeEeecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence                  00    01122222112    24578899999    99999999987644

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=98.87  E-value=8.5e-09  Score=90.22  Aligned_cols=112  Identities=15%  Similarity=0.220  Sum_probs=72.5

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.++++||.++||+.+|+..||+++|+||||||++|....+..  ...+...+   .+..+|.+|.+..-++...
T Consensus       323 dD~~~f~~~~~Am~~lGfs~~e~~~i~~ilAaILhLGNi~F~~~~~~~--~~~~~~~~---~l~~~a~LLgv~~~~L~~a  397 (837)
T 1kk8_A          323 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREE--QAESDGTA---EAEKVAFLCGINAGDLLKA  397 (837)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----C--CCEESCSH---HHHHHHHHHTSCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHhhccceEEecCCCC--ccccCCHH---HHHHHHHHHCCCHHHHHHH
Confidence            678999999999999999999999999999999999999998754211  11222222   3455566665543333211


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+......+    ....+.+|+-|    ++.|..||+.|..
T Consensus       398 L~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l----Y~rLF~wlV~~IN  443 (837)
T 1kk8_A          398 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSL----YDRMFNWLVRRVN  443 (837)
T ss_dssp             HHSCEEC----CEECCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             hcCcEEEcCCceEEeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001121111111    24578899999    9999999987764

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=98.85  E-value=4.1e-09  Score=91.76  Aligned_cols=111  Identities=20%  Similarity=0.248  Sum_probs=75.8

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCccccc-chhhHHHHHHHHHHHhcccCeeeec
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSF-SALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~-~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      |+.++|.++++||.++||+.+|+..||+++|+||||||++|...++.   ...+ ...   ..+..+|.+|-+..-++..
T Consensus       300 dD~~~f~~~~~Am~~lG~s~~e~~~i~~ilaaILhLGNi~F~~~~~~---~~~v~~~~---~~l~~~a~LLgv~~~~L~~  373 (795)
T 1w7j_A          300 DDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSD---SCAIPPKH---DPLTIFCDLMGVDYEEMAH  373 (795)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEETT---EEECCTTC---HHHHHHHHHHTCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEeecCCc---ceeecCCh---HHHHHHHHHhCCCHHHHHH
Confidence            67899999999999999999999999999999999999999764321   1112 111   2456666666664433321


Q ss_pred             CC-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          87 GS-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        87 ~~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      .-     ..+.+.....-+    ....+.+|+-|    ++.|..||+.|..
T Consensus       374 aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l----Y~rLF~wlV~~IN  420 (795)
T 1w7j_A          374 WLCHRKLATATETYIKPISKLHAINARDALAKHI----YANLFNWIVDHVN  420 (795)
T ss_dssp             HHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             HhcccEEEeCCceecCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            10     001222222112    24578899999    9999999987764

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...

Probab=98.84  E-value=4.8e-09  Score=90.95  Aligned_cols=111  Identities=22%  Similarity=0.276  Sum_probs=72.3

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.++++||.++||+.+|+..||+++|+||||||++|.. +..  +...+...+   .+..+|.+|.+..-++...
T Consensus       319 dD~~~f~~~~~Am~~lGf~~~e~~~i~~ilaaILhLGNi~F~~-~~~--~~~~~~~~~---~l~~~a~LLgv~~~~L~~a  392 (770)
T 1w9i_A          319 SDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEK-GAG--EGAVLKDKT---ALNAASTVFGVNPSVLEKA  392 (770)
T ss_dssp             CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCEE-CSS--SSEECSCCH---HHHHHHHHHTCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCceEec-CCC--CccccCChH---HHHHHHHHhCCCHHHHHHH
Confidence            6789999999999999999999999999999999999999983 211  112222222   3445555555433222110


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+......+    ....+.+|+-|    ++.|..||+.|..
T Consensus       393 L~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~l----Y~rLF~wlV~~IN  438 (770)
T 1w9i_A          393 LMEPRILAGRDLVAQHLNVEKSSSSRDALVKAL----YGRLFLWLVKKIN  438 (770)
T ss_dssp             HHSCEEEETTEEEECCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             hhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001111111111    24578899999    9999999987763

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=98.83  E-value=1.2e-08  Score=92.23  Aligned_cols=113  Identities=20%  Similarity=0.266  Sum_probs=75.8

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+..+|..++.||.++||+.+++..||+++|+|||||||.|....+..  ...+...+   .+..+|.+|.+..-.+...
T Consensus       326 ~d~~~f~~~~~a~~~lg~~~~e~~~i~~ilaaiLhlGni~f~~~~~~~--~~~~~~~~---~~~~~a~lLg~~~~~l~~~  400 (1184)
T 1i84_S          326 QDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTD--QASMPDNT---AAQKVCHLMGINVTDFTRS  400 (1184)
T ss_dssp             CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTTCCCBCCTTTS--CCBCCCSH---HHHHHHHHTTSCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHhceeCHHHHHHHHHHHHHHHhhcCceeeccCCCc--CcccCChH---HHHHHHHHHCCCHHHHHHH
Confidence            678999999999999999999999999999999999999998643221  12222222   4555666666544333211


Q ss_pred             ----C-CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          88 ----S-HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        88 ----~-~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                          . ..+.+......+    ....+.+|+-|    ++.|..||+.|...
T Consensus       401 l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~l----Y~~lF~wlv~~iN~  447 (1184)
T 1i84_S          401 ILTPRIKVGRDVVQKAQTKEQADFAIEALAKAK----FERLFRWILTRVNK  447 (1184)
T ss_dssp             HHSCCCCCTTSCCCCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHTT
T ss_pred             hcCcEEEeCCceEecCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence                0 001121111111    24678899999    99999999987643

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=98.83  E-value=9.4e-09  Score=91.54  Aligned_cols=111  Identities=22%  Similarity=0.278  Sum_probs=74.1

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+..+|.+++.||.++||+.+|+..||+++|+||||||++|....+   +...+...+   .+..+|.+|-+..-++...
T Consensus       319 dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~---~~~~~~~~~---~l~~~a~LLgv~~~~L~~~  392 (1010)
T 1g8x_A          319 SDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG---EGAVLKDKT---ALNAASTVFGVNPSVLEKA  392 (1010)
T ss_dssp             CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTTCCCBCCTT---SSCBCSCCH---HHHHHHHHHTSCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccceEEecCC---CccccCChH---HHHHHHHHHCCCHHHHHHH
Confidence            6789999999999999999999999999999999999999986543   112222222   3455555555543222110


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+......+    ....+.+|+-|    ++.|..||+.|..
T Consensus       393 l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~l----Y~~LF~wlV~~IN  438 (1010)
T 1g8x_A          393 LMEPRILAGRDLVAQHLNVEKSSSSRDALVKAL----YGRLFLWLVKKIN  438 (1010)
T ss_dssp             HHSCEEESSSSEEECCCCSHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             HhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001121111111    24578899999    9999999987753

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=98.81  E-value=1.2e-08  Score=90.77  Aligned_cols=112  Identities=21%  Similarity=0.246  Sum_probs=74.5

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+..+|.+++.||.++||+.+|+..||+++|+||||||+.|......+  ...+...+   .+..+|.+|-+..-++...
T Consensus       295 dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhlGni~F~~~~~~~--~~~~~~~~---~l~~~a~LLgv~~~~L~~~  369 (995)
T 2ycu_A          295 QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTD--QATMPDNT---AAQKLCRLLGLGVTDFSRA  369 (995)
T ss_dssp             THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHGGGCCCEECSSSC--CEECSCCH---HHHHHHHHTTCCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecCCCc--ccccCChH---HHHHHHHHHCCCHHHHHHH
Confidence            789999999999999999999999999999999999999998754221  11222222   3455555555543222110


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+......+    ....+.+|+-|    ++.|..||+.|..
T Consensus       370 l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~l----Y~~LF~wlV~~iN  415 (995)
T 2ycu_A          370 LLTPRIKVGRDYVQKAQTKEQADFALEALAKAT----YERLFRWLVLRLN  415 (995)
T ss_dssp             HHSCEEESSSSEEECCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             hcCcEEEcCCceecCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            0     001121111111    24578899999    9999999987763

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.79  E-value=1.3e-08  Score=91.12  Aligned_cols=111  Identities=20%  Similarity=0.248  Sum_probs=74.6

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCccccc-chhhHHHHHHHHHHHhcccCeeeec
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSF-SALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~-~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      |+..+|.+++.||.++||+.+++..||+++|+||||||+.|...++.   ...+ ...   ..+..+|.+|-+..-.+..
T Consensus       300 dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~---~~~~~~~~---~~l~~~a~LLgv~~~~L~~  373 (1080)
T 2dfs_A          300 DDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSD---SCAIPPKH---DPLTIFCDLMGVDYEEMAH  373 (1080)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEETTT---EEECCSSC---HHHHHHHHHHTCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEEecCCc---ceeecCCh---HHHHHHHHHhCCCHHHHHH
Confidence            67899999999999999999999999999999999999999764331   1111 111   2456666666654433321


Q ss_pred             C-----CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          87 G-----SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        87 ~-----~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      .     -..+.+.....-+    ....+.+|+-|    ++.|..||+.|..
T Consensus       374 ~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~l----Y~~LF~wlV~~iN  420 (1080)
T 2dfs_A          374 WLCHRKLATATETYIKPISKLHAINARDALAKHI----YANLFNWIVDHVN  420 (1080)
T ss_dssp             HHHEEEECC----EEEECCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             HhcccEEEeCCceEEeCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence            1     0001222222112    24678899999    9999999987764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	144
d1w7ja2	730	c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick	4e-10
d1w7ja2	730	c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick	6e-06
d1lkxa_	684	c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli	2e-09
d1lkxa_	684	c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli	1e-05
d1lkxa_	684	c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli	4e-04
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	2e-09
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	1e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-08
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	8e-05
d1d0xa2	712	c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain	2e-08
d1d0xa2	712	c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain	2e-05
d1d0xa2	712	c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain	2e-04
d1br2a2	710	c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick	2e-04
d1br2a2	710	c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick	5e-04

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

 Score = 54.4 bits (130), Expect = 4e-10
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
            S   Q  IFRIL+ ILHLGN++F+     D+DSC+I P    L  FCD L  +D +E  
Sbjct: 255 ISDSYQMGIFRILAGILHLGNVEFAS---RDSDSCAIPPKHDPLTIFCD-LMGVDYEEMA 310

Query: 121 RCLTHRKITTMQESFNKPMSV 141
             L HRK+ T  E++ KP+S 
Sbjct: 311 HWLCHRKLATATETYIKPISK 331

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

 Score = 42.4 bits (99), Expect = 6e-06
 Identities = 16/23 (69%), Positives = 18/23 (78%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          EPAVL+NL+VRF     IYTYCG
Sbjct: 20 EPAVLHNLKVRFIDSKLIYTYCG 42

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 23/81 (28%), Positives = 36/81 (44%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
               DQ  I+RIL++ILH+GNI F+  +   T + ++  S     A        D+    
Sbjct: 250 LKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLS 309

Query: 121 RCLTHRKITTMQESFNKPMSV 141
             L +R I+T        +SV
Sbjct: 310 IALCYRSISTGVGKRCSVISV 330

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILS 74
           G    DQ  I+RIL++ILH+GNI F+  +   T + +    D + +    S
Sbjct: 249 GLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 299

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          E A + NL +R  + + IYTY G
Sbjct: 13 ENAFIENLTMRH-KSDNIYTYIG 34

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 15/88 (17%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 57  DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDR 116
           D   F+  +++ +F+  +SILH+G ++F        +  + +  +         L  I+ 
Sbjct: 288 DILGFTKEEKQSMFKCTASILHMGEMKFKQ---RPREEQAESDGTAEAEKVAF-LCGINA 343

Query: 117 DEFRRCLTHRKITTMQESFNKPMSVFEM 144
            +  + L   K+    E   K  ++ ++
Sbjct: 344 GDLLKALLKPKVKVGTEMVTKGQNMNQV 371

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 38.5 bits (89), Expect = 1e-04
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          E +VLYNL+ R+     IYTY G
Sbjct: 48 EASVLYNLRSRY-TSGLIYTYSG 69

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 50.1 bits (119), Expect = 1e-08
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 57  DSCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDR 116
           D   FSA ++  I+++  +++H GN++F      +         +   A        ++ 
Sbjct: 290 DILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLMG----LNS 345

Query: 117 DEFRRCLTHRKITTMQESFNKPMSV 141
            E  + L + ++    E+  K  +V
Sbjct: 346 AELLKALCYPRVGVGNEAVTKGETV 370

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 38.9 bits (90), Expect = 8e-05
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          EPAVLYNL+ R+     IYTY G
Sbjct: 50 EPAVLYNLKERYAA-WMIYTYSG 71

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 49.7 bits (118), Expect = 2e-08
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 61  FSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFR 120
           FS  +Q  IF+I++ ILHLGNI+F  G+       ++     +L A   +   ++     
Sbjct: 289 FSQEEQMSIFKIIAGILHLGNIKFEKGAG----EGAVLKDKTALNAASTVFG-VNPSVLE 343

Query: 121 RCLTHRKITTMQESFNKPMSVFEM 144
           + L   +I   ++   + ++V + 
Sbjct: 344 KALMEPRILAGRDLVAQHLNVEKS 367

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 40.8 bits (95), Expect = 2e-05
 Identities = 19/54 (35%), Positives = 27/54 (50%)

Query: 13  FCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQ 66
           F          GFS  +Q  IF+I++ ILHLGNI+F  G+         +AL+ 
Sbjct: 277 FKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNA 330

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          EPAV +NL+VR+   + IYTY G
Sbjct: 52 EPAVFHNLRVRY-NQDLIYTYSG 73

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 2  EPAVLYNLQVRFCQHNAIYTYCG 24
          E +VL+NL+ R+     IYTY G
Sbjct: 18 EASVLHNLRERYFS-GLIYTYSG 39

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 36.6 bits (84), Expect = 5e-04
 Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 40/118 (33%)

Query: 24  GFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQ 83
           GF+  +Q  I R++SS+L LGNI F                                   
Sbjct: 264 GFTEEEQTSILRVVSSVLQLGNIVF----------------------------------- 288

Query: 84  FSGGSHGDTDSCSIAPSSGSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPMSV 141
                  + ++   +    + A     L  I+  +F R +   +I   ++   K  + 
Sbjct: 289 -----KKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVGRDVVQKAQTK 341

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	144
d1d0xa2	712	Myosin S1, motor domain {Dictyostelium discoideum	99.84
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	99.82
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	99.81
d1br2a2	710	Myosin S1, motor domain {Chicken (Gallus gallus),	99.8
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	99.8
d1lkxa_	684	Myosin S1, motor domain {Dictyostelium discoideum,	99.74
d1d0xa2	712	Myosin S1, motor domain {Dictyostelium discoideum	98.76
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	98.69
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	98.63
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	98.62
d1br2a2	710	Myosin S1, motor domain {Chicken (Gallus gallus),	98.6
d1lkxa_	684	Myosin S1, motor domain {Dictyostelium discoideum,	98.56
d1u3em2	69	Intron-encoded homing endonuclease I-HmuI {Bacteri	84.15

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.84  E-value=2.6e-23  Score=176.95  Aligned_cols=137  Identities=25%  Similarity=0.347  Sum_probs=105.3

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCe-------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNI-------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni-------   46 (144)
                      .|++|||+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.        |++.+.       
T Consensus       182 kT~~N~NSSRFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~~yL~  261 (712)
T d1d0xa2         182 KTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLN  261 (712)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHHSCHHHHHHHTCCCGGGCTTTS
T ss_pred             CcCCCCCccceeEEEEEEEcCCCccccceeEEeccCCceEEeeccccccHHHHHHHHhCCCHHHHHHhCCCCchhccccc
Confidence            4899999999999877643     23333               4455 7999865443        334332       


Q ss_pred             -----eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          47 -----QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        47 -----~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                           ...+.++.+.+        .+||+++++..||+++|||||||||+|...   +.+.+.+ .+...++.+|+|| |
T Consensus       262 ~~~~~~~~~~dd~~~f~~~~~al~~lgfs~~e~~~i~~iLaaILhLGNi~F~~~---~~~~~~i-~~~~~l~~~a~LL-g  336 (712)
T d1d0xa2         262 QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG---AGEGAVL-KDKTALNAASTVF-G  336 (712)
T ss_dssp             SSSCCCCTTCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCBCC---SSSSCBC-SCCHHHHHHHHHH-T
T ss_pred             CCCCcccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeec---CCcceec-CCHHHHHHHHHHh-C
Confidence                 11111111111        589999999999999999999999999765   3555666 6788999999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|++|++.++||.+.+|++++|+
T Consensus       337 v~~~~L~~~L~~~~~~~~~e~i~~~l~~~~A  367 (712)
T d1d0xa2         337 VNPSVLEKALMEPRILAGRDLVAQHLNVEKS  367 (712)
T ss_dssp             CCHHHHHHHHHSCEEEETTEEEECCCCHHHH
T ss_pred             CChhHhhhhhcceeeccCCceEEecCCHHHH
Confidence            9999999999999999999999999998764

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.82  E-value=8.4e-23  Score=175.50  Aligned_cols=138  Identities=16%  Similarity=0.225  Sum_probs=100.0

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHHh--------hc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSIL--------HL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~iL--------~l----------   43 (144)
                      .|++|||+|||+++.++++     ++|.+               .+|+ +|||+.+.+.+        ++          
T Consensus       185 kT~~N~NSSRFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFY~ll~G~~~~~~~~~~l~~~~~~~~~l  264 (789)
T d1kk8a2         185 KTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFI  264 (789)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTTT
T ss_pred             CCCCCCccCCcceeEEEEECCCCCCccceeEEecCCCceeeecccccchhHHHHHHHcCCCHHHHHHhCCCCchhhhHhh
Confidence            4899999999999888754     33433               3454 79998776532        22          


Q ss_pred             --CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 --GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 --Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                        |+....+.++.+.+        .+||+++++..+|+++|||||||||+|.+.+  +++.+.+ .+...+..+|+|| |
T Consensus       265 ~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~--~~~~~~~-~~~~~~~~~a~LL-g  340 (789)
T d1kk8a2         265 NQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRP--REEQAES-DGTAEAEKVAFLC-G  340 (789)
T ss_dssp             CSSCSCBTTBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC------CCCEE-SCSHHHHHHHHHH-T
T ss_pred             cCCCcccCCcchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccccceeeccC--Ccccccc-CChHHHHHHHHHh-C
Confidence              22221111111111        5999999999999999999999999998764  4555656 6778899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|++|++.++||.+.+|++++|+
T Consensus       341 i~~~~L~~~l~~~~~~~~~e~i~~~l~~~~a  371 (789)
T d1kk8a2         341 INAGDLLKALLKPKVKVGTEMVTKGQNMNQV  371 (789)
T ss_dssp             SCHHHHHHHHHSCEEC----CEECCCCHHHH
T ss_pred             CCHHHhhcceeEEEEecccCceecCCCHHHH
Confidence            9999999999999999999999999998764

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.81  E-value=7.8e-23  Score=175.83  Aligned_cols=138  Identities=17%  Similarity=0.251  Sum_probs=107.4

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~l----------   43 (144)
                      .|++|||++||+++.++++     ++|.+               .+|+ +|||+.+.+.        |++          
T Consensus       187 kT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~yl  266 (794)
T d2mysa2         187 KTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYV  266 (794)
T ss_dssp             CCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGGG
T ss_pred             cccccCChhhhheeeeeEECCCCCEeeEEEEEEecCCceEEecCcccccHHHHHHHHcCCCHHHHHHhccCCCHHHhhhc
Confidence            5899999999999988754     45555               2344 7999777543        333          


Q ss_pred             --CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          44 --GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        44 --Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                        |++...+.++.+.+        .+||+++++..||+++|||||||||+|.+..  +++.+.+ .+.+.++.+|+|| |
T Consensus       267 ~~~~~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~--~~~~~~~-~~~~~~~~~a~LL-g  342 (794)
T d2mysa2         267 SEGEITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQ--REEQAEP-DGTEVADKAAYLM-G  342 (794)
T ss_dssp             CSSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECT--TSCCEEE-SCSSHHHHHHHHH-T
T ss_pred             CCCCcccCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccceeEeecC--Ccccccc-cchHHHHHHHHHh-C
Confidence              22222221111111        5999999999999999999999999998775  4556666 6788899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|+++++.++||.+.+|++++|+
T Consensus       343 i~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a  373 (794)
T d2mysa2         343 LNSAELLKALCYPRVGVGNEAVTKGETVSEV  373 (794)
T ss_dssp             CCHHHHHHHHHSCBCCCSSSCCBCCCCHHHH
T ss_pred             CCHHHhhccceeeEEEecccceeeeCCHHHH
Confidence            9999999999999999999999999998764

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.80  E-value=1.7e-22  Score=171.96  Aligned_cols=138  Identities=23%  Similarity=0.355  Sum_probs=92.5

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHHh--------hc----------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSIL--------HL----------   43 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~iL--------~l----------   43 (144)
                      .|++|+|+|||+++.++.+     ++|.+               .+|+ +|||+.+.+.+        ++          
T Consensus       159 kT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~~ErnfHIFY~ll~G~~~~~~~~l~l~~~~~y~yL~  238 (710)
T d1br2a2         159 KTVKNDNSSRFGKFIRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLS  238 (710)
T ss_dssp             CCSSCTTEESSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHTTTTCCCTTTCTTST
T ss_pred             ccCCCCCCCCcceeeeeEEcCCCcEEEEEEEEecccCceeeEecCCCCcceeHHHHHcCCCHHHHHhhhcCChhhceecc
Confidence            4899999999999877743     22332               3454 79997665542        22          


Q ss_pred             -CCeeeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcCC
Q psy9984          44 -GNIQFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYNI  114 (144)
Q Consensus        44 -Gni~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~gv  114 (144)
                       |+....+.++.+.+        .+||+++++..||+++|+|||||||+|....  +++.+.+ .+.+.++.+|+|| ||
T Consensus       239 ~~~~~~~~~~d~~~f~~l~~Al~~lGf~~~e~~~i~~vlaaILhLGni~F~~~~--~~~~~~~-~~~~~~~~~a~LL-gv  314 (710)
T d1br2a2         239 NGHVPIPAQQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKER--NTDQASM-PDNTAAQKVCHLM-GI  314 (710)
T ss_dssp             TSCCCCSSCCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCCCBCC------CCBC-SCCHHHHHHHHHH-TC
T ss_pred             CCCcccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeeeecc--ccccccc-cChHHHHHHHHHh-cC
Confidence             22222221111111        5999999999999999999999999998763  3344444 5678899999999 99


Q ss_pred             CHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         115 DRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       115 ~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      ++++|.++|++|++.++||.+.+|++++|+
T Consensus       315 ~~~~L~~~L~~~~~~~~~e~i~~~l~~~~A  344 (710)
T d1br2a2         315 NVTDFTRSILTPRIKVGRDVVQKAQTKEQA  344 (710)
T ss_dssp             CHHHHHHHHHCC----------CCCCHHHH
T ss_pred             CHHHHHhhheeeEEEecCcceecchhHHHH
Confidence            999999999999999999999999998763

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=99.80  E-value=5.3e-22  Score=169.34  Aligned_cols=138  Identities=33%  Similarity=0.518  Sum_probs=104.6

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCCC---------------hhcH-HHHHHHHHHH--------hhcCCee------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGFS---------------ALDQ-EVIFRILSSI--------LHLGNIQ------   47 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~~---------------~~e~-~~if~~la~i--------L~lGni~------   47 (144)
                      .|++|||++||+++.++.+     ++|.+               .+|+ +|||+.+.+-        |++.+..      
T Consensus       148 kT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~~ErnfHIFY~ll~g~~~~~~~~l~l~~~~~~~yl~  227 (730)
T d1w7ja2         148 KTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTK  227 (730)
T ss_dssp             CCSSCTTEECSEEEEEEEECTTSCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHHHH
T ss_pred             ccCCCCCcccceeeeeeeecCCCCEEEEEEEEccccccceeeecCCCCcchhHHHHHcCCCHHHHHHhCCCChhhhhhhc
Confidence            5899999999999877743     33332               3454 7999877653        3333221      


Q ss_pred             ------eecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCCCCCcceecCChhHHHHHHHHhcC
Q psy9984          48 ------FSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSIAPSSGSLAAFCDILYN  113 (144)
Q Consensus        48 ------f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~~~~~~~v~~~~~~l~~~a~LL~g  113 (144)
                            ..+.++.+.+        .+||+++++..||+++|||||||||+|....   ++.+.+..+.+.+..+|+|| |
T Consensus       228 ~~~~~~~~~~~d~~~f~~~~~al~~lG~~~ee~~~i~~iLaaILhLGni~f~~~~---~~~~~~~~~~~~l~~~a~LL-g  303 (730)
T d1w7ja2         228 QGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRD---SDSCAIPPKHDPLTIFCDLM-G  303 (730)
T ss_dssp             TTSCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEE---TTEEECCTTCHHHHHHHHHH-T
T ss_pred             cCCCceeCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHheeceeEEEecC---CcceeecCCHHHHHHHHHhh-C
Confidence                  1111111111        5999999999999999999999999998763   44444446778899999999 9


Q ss_pred             CCHHHHHHHHhhceeeeCCcEEEecCCccCC
Q psy9984         114 IDRDEFRRCLTHRKITTMQESFNKPMSVFEM  144 (144)
Q Consensus       114 v~~~~L~~aLt~r~~~~~ge~i~~~ls~~q~  144 (144)
                      |++++|.++|+++++.++||.+.+|++++|+
T Consensus       304 v~~~~L~~~l~~~~~~~~~e~i~~~~~~~~a  334 (730)
T d1w7ja2         304 VDYEEMAHWLCHRKLATATETYIKPISKLHA  334 (730)
T ss_dssp             CCHHHHHHHHSEEEEECSSCEEEEECCHHHH
T ss_pred             CCHHHHHHhhheeeEeeccceeecchhHHHH
Confidence            9999999999999999999999999998763

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

Probab=99.74  E-value=1.3e-20  Score=159.77  Aligned_cols=140  Identities=25%  Similarity=0.279  Sum_probs=96.9

Q ss_pred             cchhcccHHHHHHHHHHHH-----HcCC---------------ChhcH-HHHHHHHHHH--------hhc-CCe------
Q psy9984           3 PAVLYNLQVRFCQHNAIYT-----YCGF---------------SALDQ-EVIFRILSSI--------LHL-GNI------   46 (144)
Q Consensus         3 ~t~~~~n~~~f~~~~~a~~-----i~G~---------------~~~e~-~~if~~la~i--------L~l-Gni------   46 (144)
                      -|++|+|++||+++.++..     ++|.               ..+|+ +|||+.+.+.        |++ ++.      
T Consensus       142 kT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~l~~~~~~~~y~~l  221 (684)
T d1lkxa_         142 KTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYL  221 (684)
T ss_dssp             CCSSCSSCBCSEEEEEEEECTTCCEEEEEEEEECCCGGGGTCCCTTCCCBHHHHHHHTTSCHHHHHHHTCCSCGGGSHHH
T ss_pred             cccCCCCcCceeeEEEEEecCCCcEeeEEEEEeeecccccccccccccchhhHHHHHhCCCHHHHHhhccCCccchhhhh
Confidence            4899999999999888743     2222               24455 6999777654        222 221      


Q ss_pred             ------eeecCCCCCCc--------ccccchhhHHHHHHHHHHHhcccCeeeecCCCC--CCCcceecCChhHHHHHHHH
Q psy9984          47 ------QFSGGSHGDTD--------SCSFSALDQEVIFRILSSILHLGNIQFSGGSHG--DTDSCSIAPSSGSLAAFCDI  110 (144)
Q Consensus        47 ------~f~~~~~~~~~--------~~g~~~~~~~~i~~ila~ILhlGni~F~~~~~~--~~~~~~v~~~~~~l~~~a~L  110 (144)
                            ...+.++...+        .+||+++++..||+++|||||||||+|......  +.+.+.+ .+.+.+..+|+|
T Consensus       222 ~~~~~~~~~~~dd~~~f~~l~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~~-~~~~~l~~aa~L  300 (684)
T d1lkxa_         222 KKSGCFDVSTIDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKV-SDTKSLAAAASC  300 (684)
T ss_dssp             HHTTCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC----CEEEE-SSHHHHHHHHHH
T ss_pred             cCCCCccCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeeccccccCcceeec-CCHHHHHHHHhh
Confidence                  11111111111        599999999999999999999999999764311  2333445 678899999999


Q ss_pred             hcCCCHHHHHHHHhhceeeeC----CcEEEecCCccCC
Q psy9984         111 LYNIDRDEFRRCLTHRKITTM----QESFNKPMSVFEM  144 (144)
Q Consensus       111 L~gv~~~~L~~aLt~r~~~~~----ge~i~~~ls~~q~  144 (144)
                      | ||++++|.++|++|++.++    ++.+.+|++++|+
T Consensus       301 L-gv~~~~L~~~l~~~~i~~~~~~~~~~i~~~~~~~~A  337 (684)
T d1lkxa_         301 L-KTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQA  337 (684)
T ss_dssp             H-TSCHHHHHHHHHBCC----------CCCCBCCHHHH
T ss_pred             c-CCCHHHHHhhhheeeeeecccccceEEEecCCHHHH
Confidence            9 9999999999999999987    4778899988763

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=98.76  E-value=4.8e-09  Score=88.43  Aligned_cols=111  Identities=22%  Similarity=0.265  Sum_probs=71.3

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.++..||.++||+.+++..||+++|+||||||++|...++...   .+.+.+   .+..+|.+|.+..-++...
T Consensus       272 dd~~~f~~~~~al~~lgfs~~e~~~i~~iLaaILhLGNi~F~~~~~~~~---~i~~~~---~l~~~a~LLgv~~~~L~~~  345 (712)
T d1d0xa2         272 SDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGA---VLKDKT---ALNAASTVFGVNPSVLEKA  345 (712)
T ss_dssp             CHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCBCCSSSSC---BCSCCH---HHHHHHHHHTCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecCCcce---ecCCHH---HHHHHHHHhCCChhHhhhh
Confidence            5789999999999999999999999999999999999999976432211   122211   2344555555432221100


Q ss_pred             C-----CCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 S-----HGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 ~-----~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                      -     ..+.+.....-+    ....+..|+-|    ++.|..|++.|..
T Consensus       346 L~~~~~~~~~e~i~~~l~~~~A~~~rdalaK~L----Y~~LF~wiV~~IN  391 (712)
T d1d0xa2         346 LMEPRILAGRDLVAQHLNVEKSSSSRDALVKAL----YGRLFLWLVKKIN  391 (712)
T ss_dssp             HHSCEEEETTEEEECCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             hcceeeccCCceEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHh
Confidence            0     001111111111    24567888989    8999999998763

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=98.69  E-value=1.3e-08  Score=86.75  Aligned_cols=111  Identities=13%  Similarity=0.246  Sum_probs=72.7

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeee--
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFS--   85 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~--   85 (144)
                      |+.++|.++..+|.++||+.+++..||+++|+||||||++|...++..  ...+...+   .+..+|.+|-+..-++.  
T Consensus       277 ~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~--~~~~~~~~---~~~~~a~LLgi~~~~L~~~  351 (794)
T d2mysa2         277 DDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREE--QAEPDGTE---VADKAAYLMGLNSAELLKA  351 (794)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSC--CEEESCSS---HHHHHHHHHTCCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccceeEeecCCcc--cccccchH---HHHHHHHHhCCCHHHhhcc
Confidence            467899999999999999999999999999999999999998755422  12222222   33445555544332221  


Q ss_pred             ----cCCCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          86 ----GGSHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        86 ----~~~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                          .... ..+.....-+    ....+.+|+-|    +..|..|++.+..
T Consensus       352 L~~~~~~~-~~e~i~~~l~~~~a~~~rdalaK~L----Y~~LF~wiV~~IN  397 (794)
T d2mysa2         352 LCYPRVGV-GNEAVTKGETVSEVHNSVGALAKAV----YEKMFLWMVIRIN  397 (794)
T ss_dssp             HHSCBCCC-SSSCCBCCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             ceeeEEEe-cccceeeeCCHHHHHHHHHHHHHHH----HHHHHHHHHHHhh
Confidence                1100 1111111111    24577789999    9999999998764

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.63  E-value=2.1e-08  Score=85.30  Aligned_cols=112  Identities=15%  Similarity=0.223  Sum_probs=70.6

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.+++.+|..+||+.+|+..||+++|+||||||++|...++.+.  ..+...+   .+..+|.+|.+..-++...
T Consensus       275 ~d~~~f~~~~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~--~~~~~~~---~~~~~a~LLgi~~~~L~~~  349 (789)
T d1kk8a2         275 DDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQ--AESDGTA---EAEKVAFLCGINAGDLLKA  349 (789)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----CC--CEESCSH---HHHHHHHHHTSCHHHHHHH
T ss_pred             chHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhccccceeeccCCccc--cccCChH---HHHHHHHHhCCCHHHhhcc
Confidence            5689999999999999999999999999999999999999986543221  1122211   2444555555432221110


Q ss_pred             -----CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 -----SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 -----~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                           .....+.....-+    ....+.+|+-|    ++.|..|++.+..
T Consensus       350 l~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~l----Y~~LF~wIV~~IN  395 (789)
T d1kk8a2         350 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSL----YDRMFNWLVRRVN  395 (789)
T ss_dssp             HHSCEEC----CEECCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             eeEEEEecccCceecCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHhh
Confidence                 0001111111111    24567899999    9999999998764

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=98.62  E-value=8e-09  Score=87.27  Aligned_cols=112  Identities=19%  Similarity=0.206  Sum_probs=72.9

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeecC
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSGG   87 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~~   87 (144)
                      |+.++|.+++.||..+||+.+++..||+++|+|||||||+|...+++..  ......+   .+..+|.+|.+..-++...
T Consensus       238 ~d~~~f~~~~~al~~lG~~~ee~~~i~~iLaaILhLGni~f~~~~~~~~--~~~~~~~---~l~~~a~LLgv~~~~L~~~  312 (730)
T d1w7ja2         238 DDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSC--AIPPKHD---PLTIFCDLMGVDYEEMAHW  312 (730)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEETTEE--ECCTTCH---HHHHHHHHHTCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHheeceeEEEecCCcce--eecCCHH---HHHHHHHhhCCCHHHHHHh
Confidence            5788999999999999999999999999999999999999987543211  1111111   3455566665432221100


Q ss_pred             -----CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhcee
Q psy9984          88 -----SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKI  128 (144)
Q Consensus        88 -----~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~  128 (144)
                           ..-..+......+    ....+..|+-|    +..|..|++.+..
T Consensus       313 l~~~~~~~~~e~i~~~~~~~~a~~~rdalak~l----Y~~LF~wiv~~iN  358 (730)
T d1w7ja2         313 LCHRKLATATETYIKPISKLHAINARDALAKHI----YANLFNWIVDHVN  358 (730)
T ss_dssp             HSEEEEECSSCEEEEECCHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred             hheeeEeeccceeecchhHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence                 0001111111111    24578889999    9999999987764

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=98.60  E-value=1.6e-08  Score=85.09  Aligned_cols=114  Identities=20%  Similarity=0.253  Sum_probs=70.8

Q ss_pred             cccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCCCCCcccccchhhHHHHHHHHHHHhcccCeeeec
Q psy9984           7 YNLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSHGDTDSCSFSALDQEVIFRILSSILHLGNIQFSG   86 (144)
Q Consensus         7 ~~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~~   86 (144)
                      .|+.+.|.++..||..+||+.+++..||+++|+||||||++|...++...  ......+   .+..+|.+|.+..-++..
T Consensus       247 ~~d~~~f~~l~~Al~~lGf~~~e~~~i~~vlaaILhLGni~F~~~~~~~~--~~~~~~~---~~~~~a~LLgv~~~~L~~  321 (710)
T d1br2a2         247 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQ--ASMPDNT---AAQKVCHLMGINVTDFTR  321 (710)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCCCBCC----C--CBCSCCH---HHHHHHHHHTCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeeeecccccc--ccccChH---HHHHHHHHhcCCHHHHHh
Confidence            35678999999999999999999999999999999999999976543221  1111111   344455555554322211


Q ss_pred             C-----CCCCCCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhceee
Q psy9984          87 G-----SHGDTDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRKIT  129 (144)
Q Consensus        87 ~-----~~~~~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~~~  129 (144)
                      .     ..-..+......+    ....+.+|+-|    +..|..|++.+...
T Consensus       322 ~L~~~~~~~~~e~i~~~l~~~~A~~~rdalak~L----Y~~LF~wiV~~iN~  369 (710)
T d1br2a2         322 SILTPRIKVGRDVVQKAQTKEQADFAIEALAKAK----FERLFRWILTRVNK  369 (710)
T ss_dssp             HHHCC----------CCCCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred             hheeeEEEecCcceecchhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence            0     0001111111111    24567889999    89999999877643

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

Probab=98.56  E-value=4.5e-08  Score=82.10  Aligned_cols=113  Identities=24%  Similarity=0.263  Sum_probs=74.2

Q ss_pred             ccHHHHHHHHHHHHHcCCChhcHHHHHHHHHHHhhcCCeeeecCCC--CCCcccccchhhHHHHHHHHHHHhcccCeeee
Q psy9984           8 NLQVRFCQHNAIYTYCGFSALDQEVIFRILSSILHLGNIQFSGGSH--GDTDSCSFSALDQEVIFRILSSILHLGNIQFS   85 (144)
Q Consensus         8 ~n~~~f~~~~~a~~i~G~~~~e~~~if~~la~iL~lGni~f~~~~~--~~~~~~g~~~~~~~~i~~ila~ILhlGni~F~   85 (144)
                      |+..+|.+++.+|..+||+++|+..||+++|+||||||++|....+  .....+.+.+.+   .+..+|.+|.+..-++.
T Consensus       233 dd~~~f~~l~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~~~~~~---~l~~aa~LLgv~~~~L~  309 (684)
T d1lkxa_         233 DDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTK---SLAAAASCLKTDQQSLS  309 (684)
T ss_dssp             CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEETTC----CEEEESSHH---HHHHHHHHHTSCHHHHH
T ss_pred             ChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeeccccccCcceeecCCHH---HHHHHHhhcCCCHHHHH
Confidence            5788999999999999999999999999999999999999976433  222233333322   56667777776543322


Q ss_pred             cC------CCCC---CCcceecCC----hhHHHHHHHHhcCCCHHHHHHHHhhce
Q psy9984          86 GG------SHGD---TDSCSIAPS----SGSLAAFCDILYNIDRDEFRRCLTHRK  127 (144)
Q Consensus        86 ~~------~~~~---~~~~~v~~~----~~~l~~~a~LL~gv~~~~L~~aLt~r~  127 (144)
                      ..      ....   .+.....-+    ....+.+|+-|    +..|..|++.+.
T Consensus       310 ~~l~~~~i~~~~~~~~~~i~~~~~~~~A~~~rdalak~L----Y~~LF~wiv~~I  360 (684)
T d1lkxa_         310 IALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKAL----YERLFNWLVSKI  360 (684)
T ss_dssp             HHHHBCC----------CCCCBCCHHHHHHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred             hhhheeeeeecccccceEEEecCCHHHHHHHHHHHHHHH----HHHHHHHHHHhh
Confidence            11      0000   011111111    23467888888    899999998776

>d1u3em2 d.285.1.1 (M:106-174) Intron-encoded homing endonuclease I-HmuI {Bacteriophage SP01 [TaxId: 10685]}

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain of intron-encoded endonucleases
superfamily: DNA-binding domain of intron-encoded endonucleases
family: DNA-binding domain of intron-encoded endonucleases
domain: Intron-encoded homing endonuclease I-HmuI
species: Bacteriophage SP01 [TaxId: 10685]

Probab=84.15  E-value=0.66  Score=26.15  Aligned_cols=37  Identities=19%  Similarity=0.313  Sum_probs=31.1

Q ss_pred             hHHHHHHHHhcCCCHHHHHHHHhhceeeeCCcEEEecC
Q psy9984         102 GSLAAFCDILYNIDRDEFRRCLTHRKITTMQESFNKPM  139 (144)
Q Consensus       102 ~~l~~~a~LL~gv~~~~L~~aLt~r~~~~~ge~i~~~l  139 (144)
                      .+...+|+|| |++.....++|.-|...-+|=.+.-.|
T Consensus        31 ~s~~kAaelL-GL~r~~Vs~CL~GrrKhh~GfsFe~~~   67 (69)
T d1u3em2          31 PSTKCACEEL-GLTRGKVTDVLKGHRIHHKGYTFRYKL   67 (69)
T ss_dssp             SCHHHHHHHH-TCCHHHHHHHHHTSSSCBTTBEEEECC
T ss_pred             chHHHHHHHh-CcchhHHHHHhccceeccCCeEEEEec
Confidence            4578999999 999999999999998888886665444