Domain ID e2vdkA1

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  • A: beta duplicates or obligate multimers
  • X: beta-propeller-like
  • H: beta-propeller
  • T: 7-bladed
  • F: FG-GAP
UID: 000347646
Type: Automatic domain
Parent: e1tyeA1
Range: A:1-452
Ligands: CA GOL NAG
PDB: 2vdk
PDB Description: INTEGRIN ALPHA-IIB
UniProt: P08514
Hsap BLAST neighbor: P08514
Species: Homo sapiens

Structure of domain e2vdkA1

Structural contacts of domain e2vdkA1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vdkB3 A:X,Y,Z->B:x,y,z HAD domain-related Interaction Interface Pymol
e2vdkA1 A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3 beta-propeller Interaction Interface Pymol
e2vdkA1 A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z beta-propeller Interaction Interface Pymol
e2vdkB2 A:X-Y,-Y,-Z+4/3->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2vdkB1 A:X-Y,-Y,-Z+4/3->B:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol