ECOD: domain e3srdB1

Domain ID e3srdB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: PK beta-barrel domain-like
F: PK

UID:	001517191
Type:	Automatic domain
Parent:	e2g50A1
Range:	B:117-218
PDB:	3srd
PDB Description:	Pyruvate kinase isozymes M1/M2
UniProt:	P14618
Hsap BLAST neighbor:	P14618
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3srdB1

Domains in the same chain:

Download Pymol

e3srdB2	B:14-116,B:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3srdB1	B:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3srdB3	B:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e3srdA1	A:13-116,A:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3srdA3	A:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3srdA2	A:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3srdB2	B:14-116,B:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3srdB1	B:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3srdB3	B:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3srdC1	C:13-116,C:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3srdC2	C:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3srdC3	C:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e3srdD1	D:15-116,D:219-396	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3srdD3	D:117-218	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e3srdD2	D:397-531	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e3srdB1 of H-group "RIFT-related":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3srdD1	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol