Domain ID e1a79B2

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  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: tRNA-intron endonuclease catalytic domain-like
  • T: tRNA-intron endonuclease catalytic domain-like
  • F: tRNA_int_endo
UID: 000114347
Type: Automatic domain
Parent: e1a79A2
Range: B:83-179
Ligands: AU
PDB: 1a79
PDB Description: TRNA ENDONUCLEASE
UniProt: Q58819
Hsap BLAST neighbor: Q9BSV6
Species: Methanocaldococcus jannaschii

Structure of domain e1a79B2

Structural contacts of domain e1a79B2 of H-group "tRNA-intron endonuclease catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1a79A2 B:x,y,z->A:X,Y,Z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1a79C2 B:X,Y,Z->C:x,y,z tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1a79C1 B:X,Y,Z->C:x,y,z tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e1a79D2 B:x,y,z->D:-X+2,Y-1/2,-Z+1/2 tRNA-intron endonuclease catalytic domain-like Interaction Interface Pymol
e1a79A1 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol
e1a79D1 B:x,y,z->D:-X+1,Y-1/2,-Z+1/2 tRNA-intron endonuclease N-terminal domain-like Interaction Interface Pymol