ECOD: domain e1bdfA2

Domain ID e1bdfA2

A: a+b complex topology
X: Ribosomal protein TL5/L25 C-terminal domain-like
H: Insert subdomain of RNA polymerase alpha subunit
T: Insert subdomain of RNA polymerase alpha subunit
F: RNA_pol_A_bac

UID:	000007451
Type:	Manual and representative domain
Range:	A:53-178
PDB:	1bdf
PDB Description:	RNA POLYMERASE ALPHA SUBUNIT
UniProt:	P0A7Z4
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1bdfA2

Domains in the same chain:

Download Pymol

e1bdfA1	A:2-52,A:179-232	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e1bdfA2	A:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit

Domains in the same PDB:

e1bdfA1	A:2-52,A:179-232	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e1bdfA2	A:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e1bdfB1	B:2-52,B:179-233	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e1bdfB2	B:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e1bdfC1	C:2-52,C:179-233	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e1bdfC2	C:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e1bdfD1	D:2-52,D:179-233	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e1bdfD2	D:53-178	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit

Structural contacts of domain e1bdfA2 of H-group "Insert subdomain of RNA polymerase alpha subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1bdfB1	A:X,Y,Z->B:x,y,z	RBP11-like subunits of RNA polymerase	Interaction Interface Pymol
e1bdfD2	A:-X+Y+2/3,-X+1/3,Z+1/3->D:x,y,z	Insert subdomain of RNA polymerase alpha subunit	Interaction Interface Pymol
e1bdfD1	A:-X+Y+2/3,-X+1/3,Z+1/3->D:x,y,z	RBP11-like subunits of RNA polymerase	Interaction Interface Pymol
e1bdfC2	A:X-Y,-Y,-Z->C:x,y,z	Insert subdomain of RNA polymerase alpha subunit	Interaction Interface Pymol