Domain ID e1dofB1

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_1
UID: 000132484
Type: Automatic domain
Parent: e1c3cA1
Range: B:95-336
PDB: 1dof
PDB Description: ADENYLOSUCCINATE LYASE
UniProt: Q8ZY28
Hsap BLAST neighbor: P30566
Species: Pyrobaculum aerophilum

Structure of domain e1dofB1

Domains in the same chain:

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e1dofB3 B:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofB1 B:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofB2 B:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e1dofA3 A:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofA1 A:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofA2 A:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofB3 B:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofB1 B:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofB2 B:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofC3 C:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofC1 C:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofC2 C:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofD3 D:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofD1 D:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofD2 D:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e1dofB1 of H-group "L-aspartase middle domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dofA2 B:x,y,z->A:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e1dofA1 B:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1dofC1 B:X,Y,Z->C:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e1dofC3 B:X,Y,Z->C:x,y,z L-aspartase N-terminal domain-like Interaction Interface Pymol
e1dofD1 B:X,Y,Z->D:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e1dofD2 B:x,y,z->D:X-1,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol