Domain ID e1dofB2

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  • A: alpha arrays
  • X: L-aspartase C-terminal domain-like
  • H: L-aspartase C-terminal domain-like
  • T: L-aspartase C-terminal domain-like
  • F: ASLyase_C
UID: 000132481
Type: Automatic domain
Parent: e1dofA2
Range: B:337-403
PDB: 1dof
PDB Description: ADENYLOSUCCINATE LYASE
UniProt: Q8ZY28
Species: Pyrobaculum aerophilum

Structure of domain e1dofB2

Domains in the same chain:

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e1dofB3 B:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofB1 B:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofB2 B:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e1dofA3 A:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofA1 A:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofA2 A:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofB3 B:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofB1 B:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofB2 B:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofC3 C:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofC1 C:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofC2 C:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1dofD3 D:2-94 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1dofD1 D:95-336 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1dofD2 D:337-403 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e1dofB2 of H-group "L-aspartase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dofA3 B:x,y,z->A:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e1dofA1 B:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1dofA2 B:-X-1/2,-Y,Z-1/2->A:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol
e1dofD2 B:x,y,z->D:X-1,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e1dofD1 B:x,y,z->D:X-1,Y,Z L-aspartase middle domain-like Interaction Interface Pymol