Domain ID e1e8cB1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Mur_ligase_M
UID: 000103008
Type: Automatic domain
Parent: e1j6uA2
Range: B:104-337
Ligands: UAG
PDB: 1e8c
PDB Description: UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE
UniProt: P22188
Species: Escherichia coli

Structure of domain e1e8cB1

Structural contacts of domain e1e8cB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1e8cB1 B:x,y,z->B:-X+1,Y,-Z+1/2 P-loop domains-related Interaction Interface Pymol
e1e8cB3 B:x,y,z->B:-X+1,Y,-Z+1/2 MurF and HprK N-domain-like Interaction Interface Pymol
e1e8cB2 B:x,y,z->B:-X+1,Y,-Z+1/2 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e1e8cB1 B:-X+1,Y,-Z+1/2->B:x,y,z P-loop domains-related Interaction Interface Pymol
e1e8cB3 B:-X+1,Y,-Z+1/2->B:x,y,z MurF and HprK N-domain-like Interaction Interface Pymol
e1e8cB2 B:-X+1,Y,-Z+1/2->B:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e1e8cA2 B:x,y,z->A:X,Y,Z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e1e8cA1 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1e8cA3 B:x,y,z->A:X,Y,Z MurF and HprK N-domain-like Interaction Interface Pymol
e1e8cA1 B:X-1/2,Y+1/2,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1e8cA3 B:X-1/2,Y-1/2,Z->A:x,y,z MurF and HprK N-domain-like Interaction Interface Pymol