ECOD: domain e1ffoA2

Domain ID e1ffoA2

A: a+b two layers
X: MHC antigen-recognition domain
H: MHC antigen-recognition domain
T: MHC antigen-recognition domain
F: MHC_I

UID:	000075632
Type:	Automatic domain
Parent:	e1k5nA2
Range:	A:2-181
PDB:	1ffo
PDB Description:	H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN
UniProt:	P01899
Hsap BLAST neighbor:	Q31612
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e1ffoA2	A:2-181	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1ffoA1	A:182-274	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1ffoA2	A:2-181	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1ffoA1	A:182-274	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ffoB1	B:0-99	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ffoD2	D:2-181	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e1ffoD1	D:182-274	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ffoE1	E:0-99	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1ffoA2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ffoB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1ffoD1	A:x,y,z->D:X-1,Y-1,Z	Immunoglobulin-related	Interaction Interface Pymol
e1ffoA1	A:X,Y-1,Z->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1ffoD2	A:x,y,z->D:X-2,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e1ffoD2	A:x,y,z->D:X-1,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e1ffoA2	A:x,y,z->A:X-1,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e1ffoA2	A:X-1,Y,Z->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e1ffoE1	A:x,y,z->E:X-1,Y,Z-1	Immunoglobulin-related	Interaction Interface Pymol