ECOD: domain e1fnmA4

Domain ID e1fnmA4

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	000071119
Type:	Automatic domain
Parent:	e2dy1A4
Range:	A:483-599
PDB:	1fnm
PDB Description:	ELONGATION FACTOR G
UniProt:	P13551
Hsap BLAST neighbor:	Q96RP9
Species:	Thermus thermophilus

Domain
In chain context
In PDB context

Structure of domain e1fnmA4

Domains in the same chain:

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Domains in the same PDB:

Structural contacts of domain e1fnmA4 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1fnmA5	A:x,y,z->A:-X+1,Y-1/2,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e1fnmA1	A:x,y,z->A:X-1,Y,Z	RIFT-related	Interaction Interface Pymol
e1fnmA5	A:x,y,z->A:X-1,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1fnmA5	A:x,y,z->A:-X+1/2,-Y,Z-1/2	P-loop domains-related	Interaction Interface Pymol
e1fnmA2	A:x,y,z->A:-X,Y-1/2,-Z+1/2	EF-G C-terminal domain-like	Interaction Interface Pymol

e1fnmA5	A:7-39,A:68-282	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1fnmA1	A:283-403	cradle loop barrel	RIFT-related	Alanine racemase-C
e1fnmA2	A:404-482	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1fnmA4	A:483-599	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1fnmA3	A:600-688	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like