Domain ID e1fnmA5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 000101592
Type: Automatic domain
Parent: e2c78A3
Range: A:7-39,A:68-282
Ligands: GDP MG
PDB: 1fnm
PDB Description: ELONGATION FACTOR G
UniProt: P13551
Hsap BLAST neighbor: Q96RP9
Species: Thermus thermophilus

Structure of domain e1fnmA5

Structural contacts of domain e1fnmA5 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1fnmA4 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1fnmA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1fnmA3 A:X-1,Y,Z->A:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e1fnmA4 A:X-1,Y,Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1fnmA4 A:-X+1/2,-Y,Z-1/2->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1fnmA1 A:-X+3/2,-Y,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e1fnmA3 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol