Domain ID e1frvD1

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  • A: beta meanders
  • X: all-beta domain in nickel-iron hydrogenase large subunit
  • H: all-beta domain in nickel-iron hydrogenase large subunit
  • T: all-beta domain in nickel-iron hydrogenase large subunit
  • F: NiFeSe_Hases
UID: 000044708
Type: Automatic domain
Parent: e1cc1L1
Range: D:314-364
PDB: 1frv
PDB Description: HYDROGENASE
UniProt: P12944
Species: Desulfovibrio gigas

Structure of domain e1frvD1

Domains in the same chain:

Download Pymol

e1frvD3 D:7-42,D:495-535 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvD4 D:43-85,D:446-494 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvD2 D:86-313,D:365-445 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e1frvD1 D:314-364 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Domains in the same PDB:

e1frvA2 A:3-180 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e1frvA1 A:181-263 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
e1frvB3 B:7-42,B:495-535 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvB4 B:43-85,B:446-494 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvB2 B:86-313,B:365-445 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e1frvB1 B:314-364 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e1frvC2 C:3-180 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e1frvC1 C:181-263 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
e1frvD3 D:7-42,D:495-535 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvD4 D:43-85,D:446-494 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1frvD2 D:86-313,D:365-445 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e1frvD1 D:314-364 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Structural contacts of domain e1frvD1 of H-group "all-beta domain in nickel-iron hydrogenase large subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1frvC2 D:x,y,z->C:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol