Domain ID e1ggtA8

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Transglut_N
UID: 001228471
Type: Automatic domain
Parent: e1ex0A1
Range: A:8-188
PDB: 1ggt
PDB Description: COAGULATION FACTOR XIII
UniProt: P00488
Hsap BLAST neighbor: P00488
Species: Homo sapiens

Structure of domain e1ggtA8

Domains in the same chain:

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e1ggtA8 A:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA5 A:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtA6 A:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA7 A:628-729 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1ggtA8 A:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA5 A:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtA6 A:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA7 A:628-729 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB7 B:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB5 B:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtB6 B:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1ggtA8 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ggtA5 A:x,y,z->A:-X+1,-Y+1,Z Cysteine proteinases Interaction Interface Pymol
e1ggtA6 A:x,y,z->A:-X+1,-Y+1,Z Immunoglobulin-related Interaction Interface Pymol
e1ggtA5 A:-X+1,-Y+1,Z->A:x,y,z Cysteine proteinases Interaction Interface Pymol
e1ggtA6 A:-X+1,-Y+1,Z->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ggtB3 A:x,y,z->B:X,Y,Z-1 Immunoglobulin-related Interaction Interface Pymol
e1ggtB3 A:x,y,z->B:X-1/2,-Y+3/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol
e1ggtB7 A:-X+3/2,Y-1/2,-Z+1->B:x,y,z Immunoglobulin-related Interaction Interface Pymol