Domain ID e1ggtB5

Download files:
  • A: a+b complex topology
  • X: Cysteine proteinases-like
  • H: Cysteine proteinases
  • T: Cysteine proteinases
  • F: Transglut_core
UID: 001228456
Type: Automatic domain
Parent: e2f4mA1
Range: B:189-512
PDB: 1ggt
PDB Description: COAGULATION FACTOR XIII
UniProt: P00488
Hsap BLAST neighbor: P00488
Species: Homo sapiens

Structure of domain e1ggtB5

Domains in the same chain:

Download Pymol

e1ggtB7 B:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB5 B:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtB6 B:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1ggtA8 A:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA5 A:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtA6 A:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtA7 A:628-729 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB7 B:8-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB5 B:189-512 Cysteine proteinases-like Cysteine proteinases Cysteine proteinases
e1ggtB6 B:513-627 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ggtB3 B:628-727 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1ggtB5 of H-group "Cysteine proteinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ggtB5 B:x,y,z->B:-X+1,-Y+1,Z Cysteine proteinases Interaction Interface Pymol
e1ggtB6 B:x,y,z->B:-X+1,-Y+1,Z Immunoglobulin-related Interaction Interface Pymol
e1ggtB7 B:x,y,z->B:-X+1,-Y+1,Z Immunoglobulin-related Interaction Interface Pymol
e1ggtB5 B:-X+1,-Y+1,Z->B:x,y,z Cysteine proteinases Interaction Interface Pymol
e1ggtB7 B:-X+1,-Y+1,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ggtB6 B:-X+1,-Y+1,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ggtA7 B:X,Y,Z-1->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ggtA5 B:X,Y,Z-1->A:x,y,z Cysteine proteinases Interaction Interface Pymol
e1ggtA5 B:x,y,z->A:X,Y,Z Cysteine proteinases Interaction Interface Pymol
e1ggtA5 B:x,y,z->A:-X+1,-Y+1,Z Cysteine proteinases Interaction Interface Pymol