Domain ID e1hnzE2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 000071187
Type: Automatic domain
Parent: e1pkpA2
Range: E:74-143
Ligands: MG
PDB: 1hnz
PDB Description: 30S RIBOSOMAL PROTEIN S5
UniProt: Q5SHQ5
Species: Thermus thermophilus

Structure of domain e1hnzE2

Domains in the same chain:

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e1hnzE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1hnzE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e1hnzB1 B:7-127,B:157-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e1hnzC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1hnzC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1hnzD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e1hnzE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1hnzE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1hnzF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1hnzG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1hnzH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1hnzH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1hnzI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1hnzJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1hnzK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1hnzL1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1hnzM1 M:2-126 HhH/H2TH H2TH H2TH
e1hnzN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1hnzO1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1hnzP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1hnzQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1hnzR1 R:19-88 HTH HTH tri-helical
e1hnzS1 S:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e1hnzT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1hnzE2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hnzH2 E:X,Y,Z->H:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol
e1hnzD1 E:x,y,z->D:X,Y,Z Ubiquitin-related Interaction Interface Pymol