| UID: | 001392600 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1twfA4 |
| Range: | A:2-336 |
| Ligands: | ZN |
| PDB: | 1i3q |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT |
| UniProt: | P04050 |
| Hsap BLAST neighbor: | P24928 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e1i3qA4
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e1i3qA4 of H-group "N-terminal domain in RNA-polymerase beta-prime subunit":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1i3qB1 | A:X,Y,Z->B:x,y,z | C-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e1i3qC2 | A:-X+1,Y,-Z->C:x,y,z | Insert subdomain of RNA polymerase alpha subunit | Interaction Interface Pymol |
| e1i3qB5 | A:-X+1,-Y,Z->B:x,y,z | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e1i3qB2 | A:-X+1,-Y,Z->B:x,y,z | inserted a+b domain in yeast RNA polymerase beta subunit | Interaction Interface Pymol |
| e1i3qB6 | A:-X+1,-Y,Z->B:x,y,z | insertion domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e1i3qA6 | A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2 | ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e1i3qE2 | A:x,y,z->E:X-1/2,-Y+1/2,-Z+1/2 | Eukaryotic RPB5 N-terminal domain | Interaction Interface Pymol |
