Domain ID e1i3rC1

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038741
Type: Automatic domain
Parent: e1k5nB1
Range: C:82-180
Ligands: NAG
PDB: 1i3r
PDB Description: H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K ALPHA CHAIN
UniProt: P04224
Hsap BLAST neighbor: P01903
Species: Mus musculus

Structure of domain e1i3rC1

Domains in the same chain:

e1i3rC2 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rC1 C:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1i3rA2 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rB2 B:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rB1 B:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rC2 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rC1 C:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rD2 D:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rD1 D:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rE2 E:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rF2 F:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rF1 F:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rG2 G:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rG1 G:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rH2 H:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rH1 H:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1i3rC1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1k5nB1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1i3rD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1i3rG1 C:-X,Y-1/2,-Z-1->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1i3rG1 C:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1i3rG1 C:x,y,z->H:-X,Y-1/2,-Z-1 Immunoglobulin-related Interaction Interface Pymol