Domain ID e1i3rF1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038929
Type: Automatic domain
Parent: e1k5nB1
Range: F:121-216
Ligands: NAG
PDB: 1i3r
PDB Description: FUSION PROTEIN CONSISTING OF MHC E-BETA-K PRECURSOR, GLYCINE RICH LINKER, AND HEMOGLOBIN BETA-2 CHAIN
Hsap BLAST neighbor: P79483
Species: Mus musculus

Structure of domain e1i3rF1

Domains in the same chain:

e1i3rF2 F:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rF1 F:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1i3rA2 A:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rB2 B:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rB1 B:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rC2 C:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rC1 C:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rD2 D:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rD1 D:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rE2 E:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rF2 F:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rF1 F:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rG2 G:1-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rG1 G:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1i3rH2 H:1-119 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e1i3rH1 H:121-216 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1i3rF1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1i3rE2 F:x,y,z->E:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e1i3rE1 F:x,y,z->E:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e1i3rE1 F:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1i3rA2 F:X-1,Y,Z->A:x,y,z MHC antigen-recognition domain Interaction Interface Pymol