ECOD: domain e1jmaA1

Domain ID e1jmaA1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: Herpes_glycop_D

UID:	000001664
Type:	Manual and representative domain
Range:	A:1-259
Ligands:	SO4
PDB:	1jma
PDB Description:	GLYCOPROTEIN D
UniProt:	P57083
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1jmaA1	A:1-259	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1jmaA1	A:1-259	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jmaB1	B:4-59	EGF-like	EGF-related	TNF receptor-like
e1jmaB2	B:60-105	EGF-like	EGF-related	TNF receptor-like

Structural contacts of domain e1jmaA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1jmaA1	A:x,y,z->A:-Y+1,X-Y+1,Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1jmaA1	A:-Y+1,X-Y+1,Z+1/3->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1jmaB1	A:x,y,z->B:X,Y,Z	EGF-related	Interaction Interface Pymol
e1jmaB2	A:x,y,z->B:X,Y,Z	EGF-related	Interaction Interface Pymol
e1jmaB2	A:x,y,z->B:-X,-X+Y,-Z-2/3	EGF-related	Interaction Interface Pymol
e1jmaB1	A:x,y,z->B:-X,-X+Y,-Z+1/3	EGF-related	Interaction Interface Pymol