| UID: | 000070955 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1ok7A1 |
| Range: | A:1-122 |
| PDB: | 1jqj |
| PDB Description: | DNA polymerase III, beta chain |
| UniProt: | P0A988 |
| Species: | Escherichia coli |
Structure of domain e1jqjA1
Domains in the same chain:
| e1jqjA1 | A:1-122 | DNA clamp | DNA clamp | DNA clamp |
| e1jqjA2 | A:123-244 | DNA clamp | DNA clamp | DNA clamp |
| e1jqjA3 | A:245-366 | DNA clamp | DNA clamp | DNA clamp |
Domains in the same PDB:
Structural contacts of domain e1jqjA1 of H-group "DNA clamp":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1jqjD2 | A:X-1/2,Y+1/2,Z->D:x,y,z | Histone-related | Interaction Interface Pymol |
| e1jqjD1 | A:X-1/2,Y+1/2,Z->D:x,y,z | DNA polymerase III clamp loader subunits, C-terminal domain | Interaction Interface Pymol |
| e1jqjA3 | A:x,y,z->A:-X+1,Y,-Z+2 | DNA clamp | Interaction Interface Pymol |
| e1jqjA3 | A:-X+1,Y,-Z+2->A:x,y,z | DNA clamp | Interaction Interface Pymol |
| e1jqjB3 | A:x,y,z->B:-X+1,Y-1,-Z+2 | DNA clamp | Interaction Interface Pymol |
| e1jqjC1 | A:-X+3/2,Y-1/2,-Z+2->C:x,y,z | DNA polymerase III clamp loader subunits, C-terminal domain | Interaction Interface Pymol |
| e1jqjD3 | A:x,y,z->D:-X+1,Y-1,-Z+2 | P-loop domains-related | Interaction Interface Pymol |
