ECOD: domain e1jv2B3

Domain ID e1jv2B3

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: EGF/Laminin
F: EGF_2

UID:	000008475
Type:	Manual and representative domain
Range:	B:532-562
Ligands:	NAG
PDB:	1jv2
PDB Description:	PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT
UniProt:	P05106
Hsap BLAST neighbor:	P05106
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1jv2B3

Domains in the same chain:

Download Pymol

e1jv2B1	B:58-106,B:355-434	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B5	B:107-354	HAD domain-like	HAD domain-related	vWA-like
e1jv2B3	B:532-562	EGF-like	EGF-related	EGF/Laminin
e1jv2B4	B:563-605	EGF-like	EGF-related	EGF/Laminin
e1jv2B2	B:606-690	Integrin beta tail domain	Integrin beta tail domain	Integrin beta tail domain

Domains in the same PDB:

e1jv2A4	A:1-438	beta-propeller-like	beta-propeller	7-bladed
e1jv2A1	A:439-598	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2A2	A:599-737	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2A3	A:738-838,A:868-956	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B1	B:58-106,B:355-434	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B5	B:107-354	HAD domain-like	HAD domain-related	vWA-like
e1jv2B3	B:532-562	EGF-like	EGF-related	EGF/Laminin
e1jv2B4	B:563-605	EGF-like	EGF-related	EGF/Laminin
e1jv2B2	B:606-690	Integrin beta tail domain	Integrin beta tail domain	Integrin beta tail domain

Structural contacts of domain e1jv2B3 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1jv2A2	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1jv2A4	B:x,y,z->A:X,Y,Z	beta-propeller	Interaction Interface Pymol