ECOD: domain e1jv2B5

Domain ID e1jv2B5

A: a/b three-layered sandwiches
X: HAD domain-like
H: HAD domain-related
T: vWA-like
F: Integrin_beta

UID:	000104069
Type:	Automatic domain
Parent:	e1tyeB3
Range:	B:107-354
Ligands:	CA NAG
PDB:	1jv2
PDB Description:	PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT
UniProt:	P05106
Hsap BLAST neighbor:	P05106
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1jv2B5

Domains in the same chain:

Download Pymol

e1jv2B1	B:58-106,B:355-434	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B5	B:107-354	HAD domain-like	HAD domain-related	vWA-like
e1jv2B3	B:532-562	EGF-like	EGF-related	EGF/Laminin
e1jv2B4	B:563-605	EGF-like	EGF-related	EGF/Laminin
e1jv2B2	B:606-690	Integrin beta tail domain	Integrin beta tail domain	Integrin beta tail domain

Domains in the same PDB:

e1jv2A4	A:1-438	beta-propeller-like	beta-propeller	7-bladed
e1jv2A1	A:439-598	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2A2	A:599-737	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2A3	A:738-838,A:868-956	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B1	B:58-106,B:355-434	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jv2B5	B:107-354	HAD domain-like	HAD domain-related	vWA-like
e1jv2B3	B:532-562	EGF-like	EGF-related	EGF/Laminin
e1jv2B4	B:563-605	EGF-like	EGF-related	EGF/Laminin
e1jv2B2	B:606-690	Integrin beta tail domain	Integrin beta tail domain	Integrin beta tail domain

Structural contacts of domain e1jv2B5 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1jv2A4	B:x,y,z->A:X,Y,Z	beta-propeller	Interaction Interface Pymol
e1jv2B1	B:x,y,z->B:X-Y,-Y,-Z+1/3	Immunoglobulin-related	Interaction Interface Pymol
e1jv2B5	B:x,y,z->B:X-Y,-Y,-Z+1/3	HAD domain-related	Interaction Interface Pymol
e1jv2B5	B:X-Y,-Y,-Z+1/3->B:x,y,z	HAD domain-related	Interaction Interface Pymol
e1jv2B1	B:X-Y,-Y,-Z+1/3->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol