| UID: | 000005554 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:464-581 |
| PDB: | 1jva |
| PDB Description: | VMA1-DERIVED HOMING ENDONUCLEASE X10SSS |
| UniProt: | P17255 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e1jvaA2
Domains in the same chain:
| e1jvaA1 | A:282-465,A:693-741 | Hedgehog/intein | Hedgehog/intein | Hint |
| e1jvaA2 | A:464-581 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
| e1jvaA3 | A:582-698 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
Domains in the same PDB:
| e1jvaA1 | A:282-465,A:693-741 | Hedgehog/intein | Hedgehog/intein | Hint |
| e1jvaA2 | A:464-581 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
| e1jvaA3 | A:582-698 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
| e1jvaB1 | B:279-465,B:693-741 | Hedgehog/intein | Hedgehog/intein | Hint |
| e1jvaB3 | B:464-581 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
| e1jvaB2 | B:582-698 | Homing endonucleases-like | Homing endonucleases | Homing endonucleases |
Structural contacts of domain e1jvaA2 of H-group "Homing endonucleases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1jvaB1 | A:X,Y,Z->B:x,y,z | Hedgehog/intein | Interaction Interface Pymol |
| e1jvaB1 | A:X,Y-1,Z-1->B:x,y,z | Hedgehog/intein | Interaction Interface Pymol |
| e1jvaB1 | A:X,Y-1,Z->B:x,y,z | Hedgehog/intein | Interaction Interface Pymol |
| e1jvaA1 | A:X,Y-1,Z->A:x,y,z | Hedgehog/intein | Interaction Interface Pymol |
