Domain ID e1jyvB2

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: Glyco_hydro_2
UID: 000033304
Type: Automatic domain
Parent: e1jz8A2
Range: B:220-333
Ligands: 145 DMS
PDB: 1jyv
PDB Description: Beta-Galactosidase
UniProt: P00722
Species: Escherichia coli

Structure of domain e1jyvB2

Domains in the same chain:

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e1jyvB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyvB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyvB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e1jyvA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyvA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyvA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyvB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyvB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyvB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyvC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyvC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyvC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e1jyvD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e1jyvD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e1jyvD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1jyvD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e1jyvB2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jyvC5 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e1jyvC1 B:X,Y,Z->C:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e1jyvC1 B:x,y,z->C:X-1/2,-Y+1/2,-Z Galactose-binding domain-like Interaction Interface Pymol
e1jyvA4 B:-X-1/2,-Y,Z-1/2->A:x,y,z supersandwich Interaction Interface Pymol
e1jyvD2 B:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol