ECOD: domain e1k3rA1

Domain ID e1k3rA1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Unmapped domains

UID:	000000369
Type:	Manual and representative domain
Range:	A:93-163
PDB:	1k3r
PDB Description:	CONSERVED PROTEIN MT0001
UniProt:	O26109
Species:	Methanothermobacter thermautotrophicus

Domain
In chain context
In PDB context

Structure of domain e1k3rA1

Domains in the same chain:

Download Pymol

e1k3rA2	A:1-92,A:164-262	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1k3rA1	A:93-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e1k3rA2	A:1-92,A:164-262	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1k3rA1	A:93-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1k3rB2	B:1-92,B:164-263	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1k3rB1	B:93-163	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e1k3rA1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1k3rB2	A:X,Y,Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1k3rB2	A:x,y,z->B:X-1/2,Y+1/2,Z	alpha/beta knot	Interaction Interface Pymol
e1k3rB2	A:-X+1,Y,-Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1k3rA1	A:x,y,z->A:-X+1/2,Y-1/2,-Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e1k3rA2	A:-X+1/2,Y-1/2,-Z->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1k3rA1	A:-X+1/2,Y-1/2,-Z->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e1k3rA2	A:x,y,z->A:-X+1,Y,-Z	alpha/beta knot	Interaction Interface Pymol
e1k3rA2	A:-X+1,Y,-Z->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1k3rB2	A:-X+1,Y-1,-Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol