Domain ID e1k3rB2

Download files:
  • A: a/b three-layered sandwiches
  • X: alpha/beta knot
  • H: alpha/beta knot
  • T: alpha/beta knot
  • F: Methyltrn_RNA_3
UID: 000113963
Type: Automatic domain
Parent: e1k3rA2
Range: B:1-92,B:164-263
PDB: 1k3r
PDB Description: CONSERVED PROTEIN MT0001
UniProt: O26109
Hsap BLAST neighbor: Q5T280
Species: Methanothermobacter thermautotrophicus

Structure of domain e1k3rB2

Structural contacts of domain e1k3rB2 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1k3rA1 B:x,y,z->A:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e1k3rA2 B:x,y,z->A:X,Y,Z alpha/beta knot Interaction Interface Pymol
e1k3rA2 B:X-1/2,Y+1/2,Z->A:x,y,z alpha/beta knot Interaction Interface Pymol
e1k3rA1 B:X-1/2,Y+1/2,Z->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e1k3rB2 B:x,y,z->B:-X+3/2,Y-1/2,-Z+1 alpha/beta knot Interaction Interface Pymol
e1k3rB2 B:-X+3/2,Y-1/2,-Z+1->B:x,y,z alpha/beta knot Interaction Interface Pymol
e1k3rA2 B:X-1/2,Y-1/2,Z->A:x,y,z alpha/beta knot Interaction Interface Pymol
e1k3rA1 B:x,y,z->A:-X+1,Y,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e1k3rA1 B:x,y,z->A:-X+1,Y-1,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e1k3rB2 B:x,y,z->B:X,Y-1,Z alpha/beta knot Interaction Interface Pymol
e1k3rB2 B:X,Y-1,Z->B:x,y,z alpha/beta knot Interaction Interface Pymol