| UID: | 000113963 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1k3rA2 |
| Range: | B:1-92,B:164-263 |
| PDB: | 1k3r |
| PDB Description: | CONSERVED PROTEIN MT0001 |
| UniProt: | O26109 |
| Hsap BLAST neighbor: | Q5T280 |
| Species: | Methanothermobacter thermautotrophicus |
Structure of domain e1k3rB2
Domains in the same chain:
| e1k3rB2 | B:1-92,B:164-263 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
| e1k3rB1 | B:93-163 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
Domains in the same PDB:
| e1k3rA2 | A:1-92,A:164-262 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
| e1k3rA1 | A:93-163 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e1k3rB2 | B:1-92,B:164-263 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
| e1k3rB1 | B:93-163 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
Structural contacts of domain e1k3rB2 of H-group "alpha/beta knot":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1k3rA1 | B:x,y,z->A:X,Y,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1k3rA2 | B:x,y,z->A:X,Y,Z | alpha/beta knot | Interaction Interface Pymol |
| e1k3rA2 | B:X-1/2,Y+1/2,Z->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1k3rA1 | B:X-1/2,Y+1/2,Z->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1k3rB2 | B:x,y,z->B:-X+3/2,Y-1/2,-Z+1 | alpha/beta knot | Interaction Interface Pymol |
| e1k3rB2 | B:-X+3/2,Y-1/2,-Z+1->B:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1k3rA2 | B:X-1/2,Y-1/2,Z->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e1k3rA1 | B:x,y,z->A:-X+1,Y,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1k3rA1 | B:x,y,z->A:-X+1,Y-1,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1k3rB2 | B:x,y,z->B:X,Y-1,Z | alpha/beta knot | Interaction Interface Pymol |
| e1k3rB2 | B:X,Y-1,Z->B:x,y,z | alpha/beta knot | Interaction Interface Pymol |
