Domain ID e1kdhA2

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: HHH_8
UID: 000048150
Type: Automatic domain
Parent: e2fmpA2
Range: A:148-242
PDB: 1kdh
PDB Description: Terminal deoxynucleotidyltransferase short isoform
UniProt: P09838
Hsap BLAST neighbor: P04053
Species: Mus musculus

Structure of domain e1kdhA2

Structural contacts of domain e1kdhA2 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kdhA1 A:x,y,z->A:-X+2,Y-1/2,-Z+3/2 SAM/DNA-glycosylase Interaction Interface Pymol
e1kdhA3 A:X-1,Y,Z->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e1kdhA2 A:x,y,z->A:X-1/2,-Y+3/2,-Z+1 SAM/DNA-glycosylase Interaction Interface Pymol
e1kdhA2 A:X-1/2,-Y+3/2,-Z+1->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e1kdhA3 A:x,y,z->A:-X+3/2,-Y+1,Z-1/2 Nucleotidyltransferase Interaction Interface Pymol
e1kdhA3 A:x,y,z->A:-X+5/2,-Y+1,Z-1/2 Nucleotidyltransferase Interaction Interface Pymol