Domain ID e1kyqA3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: NAD_binding_7
UID: 000009151
Type: Manual and representative domain
Range: A:1-150
Ligands: NAD
PDB: 1kyq
PDB Description: SIROHEME BIOSYNTHESIS PROTEIN MET8
UniProt: P15807
Species: Saccharomyces cerevisiae

Structure of domain e1kyqA3

Domains in the same chain:

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e1kyqA3 A:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqA2 A:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqA1 A:190-273 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like

Domains in the same PDB:

e1kyqA3 A:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqA2 A:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqA1 A:190-273 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1kyqB4 B:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqB2 B:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqB1 B:189-272 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1kyqC3 C:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqC4 C:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqC1 C:189-272 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like

Structural contacts of domain e1kyqA3 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kyqB4 A:X,Y,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e1kyqB2 A:X,Y,Z->B:x,y,z SSH domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1kyqC1 A:X,Y,Z->C:x,y,z alpha-helical domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1kyqA1 A:-X+1/2,Y-1/2,-Z->A:x,y,z alpha-helical domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1kyqB4 A:-X+1/2,Y-1/2,-Z+1->B:x,y,z Rossmann-related Interaction Interface Pymol
e1kyqB1 A:-X+1,Y,-Z+1->B:x,y,z alpha-helical domain in siroheme synthase middle domains-like Interaction Interface Pymol