Domain ID e1kyqB1

Download files:
  • A: alpha superhelices
  • X: alpha-helical domain in siroheme synthase middle domains-like
  • H: alpha-helical domain in siroheme synthase middle domains-like
  • T: alpha-helical domain in siroheme synthase middle domains-like
  • F: Sirohm_synth_C
UID: 000060290
Type: Automatic domain
Parent: e1kyqA1
Range: B:189-272
PDB: 1kyq
PDB Description: SIROHEME BIOSYNTHESIS PROTEIN MET8
UniProt: P15807
Species: Saccharomyces cerevisiae

Structure of domain e1kyqB1

Domains in the same chain:

Download Pymol

e1kyqB4 B:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqB2 B:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqB1 B:189-272 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like

Domains in the same PDB:

e1kyqA3 A:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqA2 A:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqA1 A:190-273 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1kyqB4 B:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqB2 B:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqB1 B:189-272 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like
e1kyqC3 C:1-150 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1kyqC4 C:151-189 SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like SSH domain in siroheme synthase middle domains-like
e1kyqC1 C:189-272 alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like alpha-helical domain in siroheme synthase middle domains-like

Structural contacts of domain e1kyqB1 of H-group "alpha-helical domain in siroheme synthase middle domains-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1kyqA2 B:x,y,z->A:X,Y,Z SSH domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1kyqC1 B:X-1/2,Y+1/2,Z->C:x,y,z alpha-helical domain in siroheme synthase middle domains-like Interaction Interface Pymol
e1kyqA3 B:x,y,z->A:-X+1,Y,-Z+1 Rossmann-related Interaction Interface Pymol