ECOD: domain e1m2oD1

Domain ID e1m2oD1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Arf

UID:	000101465
Type:	Automatic domain
Parent:	e1r8sA1
Range:	D:24-188
Ligands:	GNP MG
PDB:	1m2o
PDB Description:	GTP-binding protein SAR1
UniProt:	P20606
Hsap BLAST neighbor:	Q9Y6B6
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e1m2oD1

Domains in the same chain:

Download Pymol

e1m2oD1	D:24-188	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1m2oA2	A:2-44,A:391-523	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1m2oA5	A:45-119	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1m2oA4	A:120-390	HAD domain-like	HAD domain-related	vWA-like
e1m2oA3	A:524-626	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e1m2oA1	A:627-765	Gelsolin-like	Gelsolin-like	Gelsolin-like
e1m2oB1	B:24-190	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1m2oC4	C:2-44,C:391-523	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1m2oC3	C:45-119	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1m2oC1	C:120-390	HAD domain-like	HAD domain-related	vWA-like
e1m2oC2	C:524-626	ERP29 C domain-like	Helical domain of Sec23/24	Helical domain of Sec23/24
e1m2oC5	C:627-765	Gelsolin-like	Gelsolin-like	Gelsolin-like
e1m2oD1	D:24-188	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1m2oD1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1m2oC1	D:x,y,z->C:X,Y,Z	HAD domain-related	Interaction Interface Pymol
e1m2oC5	D:x,y,z->C:X,Y,Z	Gelsolin-like	Interaction Interface Pymol
e1m2oC2	D:x,y,z->C:X,Y,Z	Helical domain of Sec23/24	Interaction Interface Pymol
e1m2oB1	D:X-1,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol