ECOD: domain e1m5yD1

Domain ID e1m5yD1

A: alpha arrays
X: Triger factor/SurA peptide-binding domain-like
H: Triger factor/SurA peptide-binding domain-like
T: Porin chaperone SurA, peptide-binding domain
F: SurA_N

UID:	000044808
Type:	Automatic domain
Parent:	e1m5yA1
Range:	D:25-163,D:396-428
PDB:	1m5y
PDB Description:	Survival protein surA
UniProt:	P0ABZ6
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1m5yD1

Domains in the same chain:

Download Pymol

e1m5yD1	D:25-163,D:396-428	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yD2	D:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yD3	D:279-386	FKBP-like	FKBP-like	FKBP-like

Domains in the same PDB:

e1m5yA1	A:25-164,A:395-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yA2	A:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yA3	A:279-386	FKBP-like	FKBP-like	FKBP-like
e1m5yB1	B:25-163,B:396-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yB2	B:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yB3	B:283-385	FKBP-like	FKBP-like	FKBP-like
e1m5yC1	C:25-163,C:396-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yC2	C:172-273	FKBP-like	FKBP-like	FKBP-like
e1m5yC3	C:283-385	FKBP-like	FKBP-like	FKBP-like
e1m5yD1	D:25-163,D:396-428	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yD2	D:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yD3	D:279-386	FKBP-like	FKBP-like	FKBP-like

Structural contacts of domain e1m5yD1 of H-group "Triger factor/SurA peptide-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1m5yA1	D:x,y,z->A:-X,Y,-Z+1	Triger factor/SurA peptide-binding domain-like	Interaction Interface Pymol
e1m5yA2	D:x,y,z->A:-X,Y,-Z+1	FKBP-like	Interaction Interface Pymol
e1m5yC1	D:-X+1/2,Y,-Z+3/2->C:x,y,z	Triger factor/SurA peptide-binding domain-like	Interaction Interface Pymol
e1m5yB1	D:-X,-Y+1/2,Z-1/2->B:x,y,z	Triger factor/SurA peptide-binding domain-like	Interaction Interface Pymol
e1m5yD3	D:x,y,z->D:-X,-Y,Z	FKBP-like	Interaction Interface Pymol
e1m5yD3	D:-X,-Y,Z->D:x,y,z	FKBP-like	Interaction Interface Pymol