ECOD: domain e1m5yD3

Domain ID e1m5yD3

A: a+b two layers
X: FKBP-like
H: FKBP-like
T: FKBP-like
F: Rotamase_3

UID:	000074663
Type:	Automatic domain
Parent:	e1jnsA1
Range:	D:279-386
PDB:	1m5y
PDB Description:	Survival protein surA
UniProt:	P0ABZ6
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1m5yD3

Domains in the same chain:

Download Pymol

e1m5yD1	D:25-163,D:396-428	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yD2	D:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yD3	D:279-386	FKBP-like	FKBP-like	FKBP-like

Domains in the same PDB:

e1m5yA1	A:25-164,A:395-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yA2	A:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yA3	A:279-386	FKBP-like	FKBP-like	FKBP-like
e1m5yB1	B:25-163,B:396-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yB2	B:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yB3	B:283-385	FKBP-like	FKBP-like	FKBP-like
e1m5yC1	C:25-163,C:396-427	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yC2	C:172-273	FKBP-like	FKBP-like	FKBP-like
e1m5yC3	C:283-385	FKBP-like	FKBP-like	FKBP-like
e1m5yD1	D:25-163,D:396-428	Triger factor/SurA peptide-binding domain-like	Triger factor/SurA peptide-binding domain-like	Porin chaperone SurA, peptide-binding domain
e1m5yD2	D:172-274	FKBP-like	FKBP-like	FKBP-like
e1m5yD3	D:279-386	FKBP-like	FKBP-like	FKBP-like

Structural contacts of domain e1m5yD3 of H-group "FKBP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1m5yB3	D:X,-Y,-Z+1->B:x,y,z	FKBP-like	Interaction Interface Pymol
e1m5yA2	D:x,y,z->A:X,-Y,-Z+1	FKBP-like	Interaction Interface Pymol
e1m5yB3	D:-X,Y,-Z+1->B:x,y,z	FKBP-like	Interaction Interface Pymol
e1m5yD1	D:x,y,z->D:-X,-Y,Z	Triger factor/SurA peptide-binding domain-like	Interaction Interface Pymol
e1m5yD1	D:-X,-Y,Z->D:x,y,z	Triger factor/SurA peptide-binding domain-like	Interaction Interface Pymol