Domain ID e1md9A2

Download files:
  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: a+b domain in acetyl-CoA synthetase-like proteins
  • T: a+b domain in acetyl-CoA synthetase-like proteins
  • F: AMP-binding_C
UID: 000070670
Type: Automatic domain
Parent: e4isbA4
Range: A:428-535
Ligands: AMP DBH
PDB: 1md9
PDB Description: 2,3-dihydroxybenzoate-AMP ligase
UniProt: P40871
Hsap BLAST neighbor: Q4G176
Species: Bacillus subtilis

Structure of domain e1md9A2

Domains in the same chain:

e1md9A3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1md9A2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Domains in the same PDB:

e1md9A3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1md9A2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Structural contacts of domain e1md9A2 of H-group "a+b domain in acetyl-CoA synthetase-like proteins":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1md9A3 A:X-1,Y,Z->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:-Y,X-Y,Z+1/3->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:x,y,z->A:X,Y-1,Z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol