Domain ID e1md9A3

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like domain in Acetyl-CoA synthetase-like proteins
  • H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins
  • T: Rossmann-like domain in Acetyl-CoA synthetase-like proteins
  • F: AMP-binding
UID: 000113564
Type: Automatic domain
Parent: e3cw9A3
Range: A:1-175
PDB: 1md9
PDB Description: 2,3-dihydroxybenzoate-AMP ligase
UniProt: P40871
Species: Bacillus subtilis

Structure of domain e1md9A3

Domains in the same chain:

e1md9A3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1md9A2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Domains in the same PDB:

e1md9A3 A:1-175 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A4 A:177-352 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins Rossmann-like domain in Acetyl-CoA synthetase-like proteins
e1md9A1 A:352-427 beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins beta-barrel domain in acetyl-CoA synthetase-like proteins
e1md9A2 A:428-535 Alpha-lytic protease prodomain-like a+b domain in acetyl-CoA synthetase-like proteins a+b domain in acetyl-CoA synthetase-like proteins

Structural contacts of domain e1md9A3 of H-group "Rossmann-like domain in Acetyl-CoA synthetase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1md9A2 A:x,y,z->A:X-1,Y,Z a+b domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:x,y,z->A:-Y,X-Y+1,Z+1/3 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:x,y,z->A:-Y,X-Y+1,Z+1/3 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:-Y,X-Y+1,Z+1/3->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A2 A:x,y,z->A:-Y,X-Y,Z+1/3 a+b domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A3 A:-Y+1,X-Y+1,Z+1/3->A:x,y,z Rossmann-like domain in Acetyl-CoA synthetase-like proteins Interaction Interface Pymol
e1md9A2 A:X,Y-1,Z->A:x,y,z a+b domain in acetyl-CoA synthetase-like proteins Interaction Interface Pymol