Domain ID e1n34R1

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  • A: alpha arrays
  • X: HTH
  • H: HTH
  • T: tri-helical
  • F: Ribosomal_S18
UID: 000045141
Type: Automatic domain
Parent: e2uubR1
Range: R:19-88
PDB: 1n34
PDB Description: 30S RIBOSOMAL PROTEIN S18
UniProt: Q5SLQ0
Hsap BLAST neighbor: Q9Y3D5
Species: Thermus thermophilus

Structure of domain e1n34R1

Domains in the same chain:

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e1n34R1 R:19-88 HTH HTH tri-helical

Domains in the same PDB:

e1n34B1 B:7-127,B:157-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e1n34C2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1n34C1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1n34D1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e1n34E1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1n34E2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1n34F1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1n34G1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1n34H1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1n34H2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1n34I1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1n34J1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1n34K1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1n34L1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1n34M1 M:2-119 HhH/H2TH H2TH H2TH
e1n34N1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1n34O1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1n34P1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1n34Q1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1n34R1 R:19-88 HTH HTH tri-helical
e1n34S1 S:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e1n34T1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1n34R1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1n34F1 R:x,y,z->F:X,Y,Z Ribosomal protein S6 Interaction Interface Pymol
e1n34K1 R:x,y,z->K:X,Y,Z Ribonuclease H-like Interaction Interface Pymol