Domain ID e1nekA1

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  • A: alpha bundles
  • X: Spectrin repeat-like
  • H: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
  • T: Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
  • F: Succ_DH_flav_C
UID: 000003815
Type: Manual and representative domain
Range: A:451-588
PDB: 1nek
PDB Description: SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT
UniProt: P0AC41
Hsap BLAST neighbor: P31040
Species: Escherichia coli

Structure of domain e1nekA1

Domains in the same chain:

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e1nekA3 A:3-235,A:356-450 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1nekA2 A:236-355 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1nekA1 A:451-588 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain

Domains in the same PDB:

e1nekA3 A:3-235,A:356-450 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e1nekA2 A:236-355 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e1nekA1 A:451-588 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e1nekB2 B:1-106 beta-Grasp Ubiquitin-related Ubiquitin-like
e1nekB1 B:107-238 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e1nekC1 C:1-129 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e1nekD1 D:3-115 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e1nekA1 of H-group "Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1nekB2 A:X,Y,Z->B:x,y,z Ubiquitin-related Interaction Interface Pymol
e1nekA3 A:x,y,z->A:Y+1/3,X-1/3,-Z+2/3 Rossmann-related Interaction Interface Pymol
e1nekA1 A:x,y,z->A:Y+1/3,X-1/3,-Z+2/3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Interaction Interface Pymol
e1nekA1 A:Y+1/3,X-1/3,-Z+2/3->A:x,y,z Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Interaction Interface Pymol
e1nekA3 A:Y+1/3,X-1/3,-Z+2/3->A:x,y,z Rossmann-related Interaction Interface Pymol