Domain ID e1ocoA1

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  • A: alpha superhelices
  • X: Cytochrome c oxidase subunit I-like
  • H: Cytochrome c oxidase subunit I-like
  • T: Cytochrome c oxidase subunit I-like
  • F: COX1
UID: 000060176
Type: Automatic domain
Parent: e1v54A1
Range: A:1-514
Ligands: CMO CU HEA MG NA
PDB: 1oco
PDB Description: CYTOCHROME C OXIDASE
UniProt: P00396
Hsap BLAST neighbor: P00395
Species: Bos taurus

Structure of domain e1ocoA1

Domains in the same chain:

e1ocoA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like

Domains in the same PDB:

e1ocoA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1ocoB2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1ocoB1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1ocoC1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1ocoD1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1ocoE1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1ocoF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1ocoG1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1ocoH1 H:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1ocoI1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1ocoJ1 J:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1ocoK1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1ocoL1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocoM1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e1ocoN1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1ocoO2 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1ocoO1 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1ocoP1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1ocoQ1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1ocoR1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1ocoS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1ocoT1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1ocoU1 U:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1ocoV1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1ocoW1 W:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1ocoX1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1ocoY1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocoZ1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e1ocoA1 of H-group "Cytochrome c oxidase subunit I-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ocoB1 A:X,Y,Z->B:x,y,z Cupredoxin-related Interaction Interface Pymol
e1ocoB2 A:X,Y,Z->B:x,y,z Cytochrome c oxidase subunit II-like, transmembrane region Interaction Interface Pymol
e1ocoC1 A:X,Y,Z->C:x,y,z Cytochrome c oxidase subunit III-like Interaction Interface Pymol
e1ocoL1 A:X,Y,Z->L:x,y,z Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Interaction Interface Pymol
e1ocoD1 A:X,Y,Z->D:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e1ocoF1 A:X,Y,Z->F:x,y,z Rubredoxin-related Interaction Interface Pymol
e1ocoM1 A:X,Y,Z->M:x,y,z Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Interaction Interface Pymol
e1ocoT1 A:X,Y,Z->T:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e1ocoG1 A:X,Y,Z->G:x,y,z Mitochondrial cytochrome c oxidase subunit VIa Interaction Interface Pymol
e1ocoK1 A:X,Y,Z->K:x,y,z Mitochondrial cytochrome c oxidase subunit VIIb Interaction Interface Pymol
e1ocoJ1 A:X,Y,Z->J:x,y,z Mitochondrial cytochrome c oxidase subunit VIIa Interaction Interface Pymol
e1ocoH1 A:X,Y,Z->H:x,y,z Cytochrome c oxidase subunit h Interaction Interface Pymol
e1ocoI1 A:X,Y,Z->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol