Domain ID e1ocoB2

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  • A: extended segments
  • X: Cytochrome c oxidase subunit II-like, transmembrane region
  • H: Cytochrome c oxidase subunit II-like, transmembrane region
  • T: Cytochrome c oxidase subunit II-like, transmembrane region
  • F: COX2_TM
UID: 000061185
Type: Automatic domain
Parent: e1v54B2
Range: B:1-90
Ligands: HEA
PDB: 1oco
PDB Description: CYTOCHROME C OXIDASE
UniProt: P68530
Hsap BLAST neighbor: P00403
Species: Bos taurus

Structure of domain e1ocoB2

Domains in the same chain:

e1ocoB2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1ocoB1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related

Domains in the same PDB:

e1ocoA1 A:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1ocoB2 B:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1ocoB1 B:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1ocoC1 C:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1ocoD1 D:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1ocoE1 E:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1ocoF1 F:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1ocoG1 G:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1ocoH1 H:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1ocoI1 I:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1ocoJ1 J:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1ocoK1 K:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1ocoL1 L:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocoM1 M:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e1ocoN1 N:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e1ocoO2 O:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e1ocoO1 O:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e1ocoP1 P:3-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e1ocoQ1 Q:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e1ocoR1 R:5-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e1ocoS1 S:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e1ocoT1 T:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e1ocoU1 U:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e1ocoV1 V:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e1ocoW1 W:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e1ocoX1 X:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e1ocoY1 Y:2-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e1ocoZ1 Z:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)

Structural contacts of domain e1ocoB2 of H-group "Cytochrome c oxidase subunit II-like, transmembrane region":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ocoA1 B:x,y,z->A:X,Y,Z Cytochrome c oxidase subunit I-like Interaction Interface Pymol
e1ocoI1 B:X,Y,Z->I:x,y,z Mitochondrial cytochrome c oxidase subunit VIc Interaction Interface Pymol
e1ocoH1 B:X,Y,Z->H:x,y,z Cytochrome c oxidase subunit h Interaction Interface Pymol
e1ocoD1 B:X,Y,Z->D:x,y,z Mitochondrial cytochrome c oxidase subunit IV Interaction Interface Pymol
e1ocoE1 B:X,Y,Z->E:x,y,z Cytochrome c oxidase subunit E Interaction Interface Pymol
e1ocoK1 B:X,Y,Z->K:x,y,z Mitochondrial cytochrome c oxidase subunit VIIb Interaction Interface Pymol