Domain ID e1ofdB1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Alpha subunit of glutamate synthase, insertion domain
  • T: Alpha subunit of glutamate synthase, insertion domain
  • F: GATase_2
UID: 000066758
Type: Automatic domain
Parent: e1ofdA1
Range: B:66-169
PDB: 1ofd
PDB Description: FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
UniProt: P55038
Species: Synechocystis sp. PCC 6803

Structure of domain e1ofdB1

Domains in the same chain:

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e1ofdB3 B:1-65,B:170-429 Ntn/PP2C Ntn Class II glutamine amidotransferases
e1ofdB1 B:66-169 Alpha-beta plaits Alpha subunit of glutamate synthase, insertion domain Alpha subunit of glutamate synthase, insertion domain
e1ofdB5 B:423-793 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdB4 B:794-1239 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdB2 B:1240-1507 Single-stranded right-handed beta-helix Alpha subunit of glutamate synthase-C Alpha subunit of glutamate synthase-C

Domains in the same PDB:

e1ofdA3 A:1-66,A:171-430 Ntn/PP2C Ntn Class II glutamine amidotransferases
e1ofdA1 A:67-170 Alpha-beta plaits Alpha subunit of glutamate synthase, insertion domain Alpha subunit of glutamate synthase, insertion domain
e1ofdA4 A:431-793 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdA5 A:794-1239 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdA2 A:1240-1507 Single-stranded right-handed beta-helix Alpha subunit of glutamate synthase-C Alpha subunit of glutamate synthase-C
e1ofdB3 B:1-65,B:170-429 Ntn/PP2C Ntn Class II glutamine amidotransferases
e1ofdB1 B:66-169 Alpha-beta plaits Alpha subunit of glutamate synthase, insertion domain Alpha subunit of glutamate synthase, insertion domain
e1ofdB5 B:423-793 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdB4 B:794-1239 TIM beta/alpha-barrel TIM barrels TIM barrels
e1ofdB2 B:1240-1507 Single-stranded right-handed beta-helix Alpha subunit of glutamate synthase-C Alpha subunit of glutamate synthase-C

Structural contacts of domain e1ofdB1 of H-group "Alpha subunit of glutamate synthase, insertion domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ofdA5 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 TIM barrels Interaction Interface Pymol
e1ofdA3 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Ntn Interaction Interface Pymol
e1ofdA1 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Alpha subunit of glutamate synthase, insertion domain Interaction Interface Pymol
e1ofdA4 B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 TIM barrels Interaction Interface Pymol