ECOD: domain e1ofdB4

Domain ID e1ofdB4

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Glu_synthase

UID:	001686364
Type:	Automatic domain
Parent:	e1ofdA5
Range:	B:794-1239
Ligands:	AKG F3S FMN
PDB:	1ofd
PDB Description:	FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2
UniProt:	P55038
Species:	Synechocystis sp. PCC 6803

Domain
In chain context
In PDB context

Structure of domain e1ofdB4

Domains in the same chain:

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Domains in the same PDB:

e1ofdA3	A:1-66,A:171-430	Ntn/PP2C	Ntn	Class II glutamine amidotransferases
e1ofdA1	A:67-170	Alpha-beta plaits	Alpha subunit of glutamate synthase, insertion domain	Alpha subunit of glutamate synthase, insertion domain
e1ofdA4	A:431-793	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1ofdA5	A:794-1239	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1ofdA2	A:1240-1507	Single-stranded right-handed beta-helix	Alpha subunit of glutamate synthase-C	Alpha subunit of glutamate synthase-C
e1ofdB3	B:1-65,B:170-429	Ntn/PP2C	Ntn	Class II glutamine amidotransferases
e1ofdB1	B:66-169	Alpha-beta plaits	Alpha subunit of glutamate synthase, insertion domain	Alpha subunit of glutamate synthase, insertion domain
e1ofdB5	B:423-793	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1ofdB4	B:794-1239	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1ofdB2	B:1240-1507	Single-stranded right-handed beta-helix	Alpha subunit of glutamate synthase-C	Alpha subunit of glutamate synthase-C

Structural contacts of domain e1ofdB4 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ofdA1	B:x,y,z->A:-X+1,Y-1/2,-Z+1/2	Alpha subunit of glutamate synthase, insertion domain	Interaction Interface Pymol
e1ofdA3	B:x,y,z->A:-X+1,Y-1/2,-Z+1/2	Ntn	Interaction Interface Pymol