ECOD: domain e1oqdQ1

Domain ID e1oqdQ1

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: TNF receptor-like
F: BCMA-Tall_bind

UID:	000091764
Type:	Automatic domain
Parent:	e1xu2R1
Range:	Q:1-36
PDB:	1oqd
PDB Description:	TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 17
UniProt:	Q02223
Hsap BLAST neighbor:	Q02223
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1oqdQ1

Domains in the same chain:

Download Pymol

e1oqdQ1	Q:1-36	EGF-like	EGF-related	TNF receptor-like

Domains in the same PDB:

e1oqdA1	A:1-144	jelly-roll	TNF-like	TNF-like
e1oqdB1	B:1-144	jelly-roll	TNF-like	TNF-like
e1oqdC1	C:1-144	jelly-roll	TNF-like	TNF-like
e1oqdD1	D:1-144	jelly-roll	TNF-like	TNF-like
e1oqdE1	E:1-144	jelly-roll	TNF-like	TNF-like
e1oqdF1	F:1-144	jelly-roll	TNF-like	TNF-like
e1oqdG1	G:1-144	jelly-roll	TNF-like	TNF-like
e1oqdH1	H:1-144	jelly-roll	TNF-like	TNF-like
e1oqdI1	I:1-144	jelly-roll	TNF-like	TNF-like
e1oqdJ1	J:1-144	jelly-roll	TNF-like	TNF-like
e1oqdK1	K:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdL1	L:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdM1	M:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdN1	N:1-21	EGF-like	EGF-related	TNF receptor-like
e1oqdO1	O:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdP1	P:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdQ1	Q:1-36	EGF-like	EGF-related	TNF receptor-like
e1oqdR1	R:1-36	EGF-like	EGF-related	TNF receptor-like

Structural contacts of domain e1oqdQ1 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1oqdI1	Q:x,y,z->I:X,Y,Z	TNF-like	Interaction Interface Pymol
e1oqdG1	Q:x,y,z->G:X,Y,Z	TNF-like	Interaction Interface Pymol
e1oqdE1	Q:x,y,z->E:X-Y,-Y+1,-Z	TNF-like	Interaction Interface Pymol