Domain ID e1pd1A2

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: vWA-like
  • F: Sec23_trunk
UID: 001394610
Type: Automatic domain
Parent: e2qtvA5
Range: A:301-459,A:480-552
PDB: 1pd1
PDB Description: Protein transport protein Sec24
UniProt: P40482
Hsap BLAST neighbor: O95486
Species: Saccharomyces cerevisiae

Structure of domain e1pd1A2

Structural contacts of domain e1pd1A2 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pd1A1 A:X-Y,-Y+1,-Z+1/3->A:x,y,z Gelsolin-like Interaction Interface Pymol
e1pd1A3 A:X-Y,-Y+1,-Z+1/3->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1pd1A4 A:X-Y,-Y+1,-Z+1/3->A:x,y,z Helical domain of Sec23/24 Interaction Interface Pymol
e1pd1A5 A:x,y,z->A:-X+1,-X+Y,-Z+2/3 Rubredoxin-related Interaction Interface Pymol
e1pd1A2 A:x,y,z->A:-X,-X+Y,-Z+2/3 HAD domain-related Interaction Interface Pymol
e1pd1A2 A:-X,-X+Y,-Z+2/3->A:x,y,z HAD domain-related Interaction Interface Pymol