Domain ID e1pklB1

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  • A: a/b three-layered sandwiches
  • X: PK C-terminal domain-like
  • H: PK C-terminal domain-like
  • T: PK C-terminal domain-like
  • F: PK_C
UID: 001517862
Type: Automatic domain
Parent: e1pklA3
Range: B:358-498
Ligands: SO4
PDB: 1pkl
PDB Description: PROTEIN (PYRUVATE KINASE)
UniProt: Q27686
Hsap BLAST neighbor: P14618
Species: Leishmania mexicana

Structure of domain e1pklB1

Domains in the same chain:

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e1pklB2 B:1-89,B:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklB4 B:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklB1 B:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Domains in the same PDB:

e1pklA2 A:1-89,A:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklA1 A:88-186 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklA3 A:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklB2 B:1-89,B:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklB4 B:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklB1 B:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklC2 C:1-89,C:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklC4 C:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklC1 C:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklD2 D:1-89,D:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklD4 D:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklD1 D:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklE2 E:1-89,E:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklE4 E:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklE1 E:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklF2 F:1-89,F:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklF4 F:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklF1 F:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklG2 G:1-89,G:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklG4 G:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklG1 G:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e1pklH2 H:1-89,H:190-363 TIM beta/alpha-barrel TIM barrels TIM barrels
e1pklH4 H:88-189 cradle loop barrel RIFT-related PK beta-barrel domain-like
e1pklH1 H:358-498 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Structural contacts of domain e1pklB1 of H-group "PK C-terminal domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pklD2 B:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol
e1pklA3 B:x,y,z->A:X,Y,Z PK C-terminal domain-like Interaction Interface Pymol
e1pklC2 B:x,y,z->C:-X+2,Y-1/2,-Z TIM barrels Interaction Interface Pymol